Pungitius pungitius (ninespine stickleback): 119226899
Help
Entry
119226899 CDS
T07626
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119226899 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119226899 (myo5b)
04131 Membrane trafficking [BR:
ppug04131
]
119226899 (myo5b)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119226899 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119226899 (myo5b)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119226899 (myo5b)
mRNA cycle factors
P-body specific factors
119226899 (myo5b)
Membrane trafficking [BR:
ppug04131
]
Others
Actin-binding proteins
Myosins
119226899 (myo5b)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119226899 (myo5b)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119226899 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Seryl_tRNA_N
AAA_22
nSTAND3
Ac76
AAA_16
Motif
Other DBs
NCBI-GeneID:
119226899
NCBI-ProteinID:
XP_037341164
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MSVNELYAKYTRVWIPDPDDVWRAAEIVRDYKEGEAVLHLTLEDDTPLEYPVGPKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYEQLHIYG
EEVIRAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSTSDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFNQQYRIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEYKDLCLTSAEDFTFTSMGENIFIEGVN
DAADLEKTREAFTLLGIKEGNQSSIFKVIASILHLGNIEICSQRDGESCHVSRNDLHLKH
FCTLLGVELKQMEHWLCHRKLVTATETYVKNMSTKQAENARDALAKHIYARMFDWIVEHI
NKALHTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDENWAQKLYKQHSASAHFQK
PRMSNVSFIIVHFADKVEYQSEGFLEKNRDTVYGEQINILKASEFQLVADLFHDKDDVAP
PKSSRVNVRPAKSTPKAPNKEHKKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDLKEP
FMFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLLKKSEMASADKKLVCR
NLLETLIKDHDMFQFGKTKIFFRAGQVAYLEKLRADRFRSACIKIQKTVRGWLQRVRYRK
VRKMAVSLQRYGRGYLARRHADLLRQTRAALLCQKQYRMVRDRRAYLRVRRAVVTIQAFT
RGMFTRRIFQEFMLHHKAMLIQKVVRGWLQRRRFRRARDAAITIQCLFRRVRARRRLQQL
KVEARSAERLKSLNSGMENKIVQLQRKMDDQSKELRTQNEQLLQVNNKLQKQLEQVKTQQ
GEAGGAGGAQVSSLQEELDRLKEELQEASAQRKRMEEEHGNEKTGLQLRVEELEKENALL
KSEKEEMNHRILQQTKSFEEDSSSVSLMETSLQAELDAERQRYQNLLKQMTTVEQRYDNL
KEELSMSKFQPGHRRNPSNQSSLESDSNYTSISTSELGDTEDSIQLVEEMGVEKAAMDIG
LFMKLQKRVRELEQERRRLQINLDKMEELARSRGSESRSSTSEQETADLAYNNLKRQELE
SENKKLKKDLNELRRSISERASENDPSNELQDSYNLLLSQLRSANEELEGRKEEVLILRT
QIVSAAHIRENNQPRQQSSEAPEVSEDNEPVDSEEALKAYHGLCESKKLLEAQLQTQSRQ
HGDELEALHTQIELLRDDIEKKQEILSYTASLSPEARVEYSVQQEITRLTNDNLDLKELV
EKLEKNERKLKKQLRIYMKKVQELEASQAAAQTNRSRPPLSRQVTVQRKEKDFEGMLEYY
KEDEALLFKTLITDIRPNTVSATVPCLPAYILFMCIRHADYVNDDQKVESLLTSTINAIK
KVLKKNNEDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQNTGKQNEHCLKNFDLAEYRQV
LSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKTMGYRNRSSSMDVDSGGPA
TYTLKALIRQLGQFHGTMRDHGLDPEIVGQVVRQLFHCVNAVTLNNLLLRKDVCSWSNGM
QLRYNTSQMEEWLRANNLSHSKAAETLEPIIQAAQLLQVKKKTTQDAEAICSLCSALSTQ
QIVKILNLYTPLNEFEERVSVSFIRSIQTRPQQRHDPPQLLMDTKHMFPVLFPYTPSALS
LETLHIPASLGLDFLIRV
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaacgagctctacgcaaagtacacgcgggtctggatccccgacccggacgat
gtgtggagggccgcagagatcgtcagggactacaaggaaggggaggcggtgctccacctc
acactggaggatgacacgcctctggagtaccccgtgggtccaaaaagtaaccccctccct
ttcctgcgtaaccctgacatcctggtgggcgagaacgacctcactgctctcagttacctg
cacgaacctgcagtcctgcacaacctgaaggtccgcttcctggagcccaaccacatctac
acgtactgcggtattgtgctggtggccattaacccgtacgagcagctgcacatctatggg
gaggaggtgatccgggcctacagcggtcagaacatgggcgacatggaccctcacatcttc
gctgtggcggaagaggcctacaagcagatggccagagacgagaagaaccagtcgatcatc
gtcagcggggaatcaggagcgggaaagaccgtttccgccaagtacgccatgcgcttcttc
gctacagtggggggctcgaccagcgacactaacgtggaggagaaggtgctcgcctccagt
cccatcatggaggccatcggaaacgctaaaaccacccgaaacgacaacagcagccgcttt
gggaagtacattgagatcggcttcaatcagcagtaccgcatcattggggccaacatgagg
acgtacctgctggagaagtcccgcgtggtctttcaggcagaggacgagaggaactatcac
atcttctaccagctgtgtgcctcggccagcctaccggagtacaaggacctctgcctgacc
agtgctgaagacttcaccttcacgtctatgggagagaacatcttcattgagggagtgaat
gatgcagcagacttggagaagaccagggaggccttcacactgctggggataaaggagggc
aatcagagcagcatctttaaagtcatcgcctccatccttcatctgggaaacattgagatt
tgctcacaacgagacggggagtcctgtcatgtctcgagaaacgacctccatctgaagcac
ttctgcacgttgctgggggtggagttaaagcagatggagcactggctctgtcacaggaag
ctcgtcacggcgaccgagacctacgtgaagaacatgtcaaccaagcaggcggagaacgcc
cgcgacgcgctcgccaaacacatctatgctcgcatgtttgactggatcgtggagcacatc
aacaaggccctgcacacctcctccaaacagcactccttcatcggagtcctggatatctat
ggctttgagacgtttgaggtgaacagcttcgaacagttctgcatcaactacgccaacgag
aaacttcagcagcagttcaactctcacgtgttcaagctggagcaggaggagtacatgaag
gagcagatcccctggacgctcatcgacttctacgacaaccagccctgcatcgacctgatc
gaggctcggcttggcatcctggacctgctggacgaagagtgcaaggtgccgaagggcacg
gacgagaactgggcccagaagctgtacaagcagcactcagccagtgctcactttcagaaa
cctcgcatgtccaacgtctccttcatcatcgtacacttcgctgacaaggtcgaatatcag
agtgaaggttttctggagaagaaccgggacacggtgtacggggagcagatcaacatcctg
aaggccagtgagtttcagctggttgcagatctctttcatgacaaggacgacgtggccccc
ccaaagtcctccagagtgaacgtcagaccggccaagtcgacccccaaagccccaaacaaa
gagcacaagaagaccgtgggacatcagttccgcagctccctccatctcctgatggagaca
ctgaacgctacgactcctcactacgtccgctgcatcaaacccaacgacctgaaggagccc
ttcatgtttgattccaggagagcggtccagcagctcagagcctgtggagtcctggagacg
atccggatcagtgcagccgggtatccgtccaggtggacctacccagacttcttcaaccgg
taccgggtgctgctgaagaagtccgagatggcctcggcggacaagaagctggtgtgcagg
aacctgctggagactctcatcaaggatcacgacatgttccagttcgggaagacgaagatc
ttcttccgggccgggcaggtggcctacctggagaagctccgcgccgacaggttccgctcg
gcctgcatcaagatccagaagacggtgcgcggctggctgcagagggtccggtaccgcaag
gtccgcaagatggccgtcagcctgcagcgctacgggaggggctacctggcccgcaggcac
gctgacctcctgcgtcagacccgagccgccctgctctgtcagaagcagtaccgcatggtg
agagacagacgggcgtacctgagggtgagacgggctgtcgtcactatccaggccttcacc
agagggatgttcacccgccgcatcttccaggagttcatgctgcaccacaaggccatgctg
atccagaaggtggtgcgtggctggctccagaggcggaggttcagacgcgctcgtgatgcc
gccatcaccatccagtgtctcttcaggcgggtccgagcccgccggcgcctgcagcagctg
aaggtggaggcccgctccgccgagcgcctcaagagcctcaacagcggcatggagaacaag
atcgtccagctgcagaggaagatggacgaccagtccaaggagctccgcacacagaacgaa
cagctgctgcaggtcaacaacaagctgcagaaacagctggagcaggtgaagacccagcag
ggagaagcaggaggagcaggaggagcccaggtctcctcgctgcaggaggagctggaccgg
ctgaaggaggaactgcaggaggcgtcggcccagaggaagaggatggaagaggagcacggc
aacgagaagacggggctccaactgcgggtggaggagttggagaaagagaacgctctgctg
aagagtgagaaggaagagatgaaccacaggattcttcagcagactaagagctttgaagag
gacagcagcagtgtgtctctgatggagacatcgctgcaggcggagctggacgcagagagg
cagcgctaccagaacctcctcaagcagatgaccacggtggagcagagatacgacaacctg
aaggaggagctgtccatgagcaagttccagcctggccacaggaggaacccgtccaatcag
agcagcctggagtccgactccaactacacctccatctccacctcggagttaggagacact
gaagactccatccagctggtggaggagatgggcgtggagaaggccgccatggacatcggc
ctgttcatgaagctgcagaagagagtccgagagctggagcaggagaggaggaggctgcag
atcaacctggacaagatggaggagctggccagaagcaggggttcagagtccagaagctcc
acctcggagcaggagacggctgatctggcctacaacaacctgaagaggcaggagctggaa
tcggagaacaagaagctgaagaaggacctgaacgagctgaggaggtccatctctgagcga
gcgtctgagaacgacccgtccaatgagcttcaggacagctacaacctgctgctcagccag
ctccgctcagccaatgaggagctggagggccgtaaggaggaggtcctcatcctgaggact
cagatagtcagcgccgcccacatccgggagaacaaccagccaagacagcagagcagtgaa
gctccggaggtgagtgaggacaatgagccggtggacagcgaggaggctctcaaagcgtac
cacggactgtgtgagtcaaagaagctgctggaggctcagctgcagactcagtccaggcag
catggggacgagctggaagctctccacacgcagatcgagctgctgagggacgacatcgag
aagaagcaggagatcttgagctacacggcgtctctgtctccggaggcccgggtggagtac
agcgtccagcaggagatcaccaggctcaccaacgacaacctggacctcaaggagctagtg
gagaaactggagaagaacgagaggaagctgaagaaacagctcaggatctacatgaagaag
gtccaggagctagaagcttctcaggctgcagctcagaccaaccggtccagacctccactg
agccgccaggtgacggtccagaggaaagagaaggactttgagggcatgctggagtactac
aaggaggatgaggccctactgtttaagacactgatcacagacatcaggcctaacaccgtg
tcggccacagttccatgcctgccggcttacatcctcttcatgtgcatccgccacgccgac
tacgtcaacgacgaccagaaggtggagtccctgctcacctccaccatcaacgccatcaag
aaggtgctcaagaagaataacgaggactttgagatgacgtccttctggctggcgaacacc
agccggctgcttcactgcctgaagcagtacagcggagatgaggcgtttatgacccagaac
acgggcaaacagaacgaacactgcctgaagaacttcgacctggccgagtaccgacaggtg
ctgagtgacctctccatccagatctaccagcagctcatcaaggtggctgagggcatcata
cagcccatgatcgtgtcggccatgttggaaagcgagagcatccccagcctggcgggggtc
aagacgatgggctacaggaaccgctcgtccagcatggacgtggacagcggcgggcccgcc
acctacaccctgaaggcgctgatccggcagctgggccagttccacggcaccatgcgggac
cacggcctggaccccgagatcgtgggtcaggtggtgcgtcagctgttccactgcgtcaac
gccgtcaccctcaacaacctgctgctgcgcaaagacgtgtgctcctggagcaacggcatg
cagctcaggtacaacaccagtcagatggaggagtggcttcgagccaacaacctgtcccac
agtaaagctgcagagaccttggagccgatcatccaggccgctcagctgctgcaggtgaag
aagaagacgactcaggacgccgaggccatctgctcgctgtgcagcgccctcagcacgcag
cagatcgtgaagatcttgaacctctacactcctctgaacgagtttgaggagcgagtcagt
gtgtccttcatcaggagcatccagacccgtcctcagcagagacacgacccccctcagctc
ctcatggacaccaagcacatgttccccgtcctgttcccctacacgccgtccgccctcagc
ctggagacgctgcacatccccgcctccctcggcctcgacttcctcatccgggtctga
DBGET
integrated database retrieval system
