Pungitius pungitius (ninespine stickleback): 119226899
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Entry
119226899 CDS
T07626
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119226899 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119226899 (myo5b)
04131 Membrane trafficking [BR:
ppug04131
]
119226899 (myo5b)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119226899 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119226899 (myo5b)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119226899 (myo5b)
mRNA cycle factors
P-body specific factors
119226899 (myo5b)
Membrane trafficking [BR:
ppug04131
]
Others
Actin-binding proteins
Myosins
119226899 (myo5b)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119226899 (myo5b)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119226899 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Seryl_tRNA_N
AAA_22
nSTAND3
NPHP3_N
Ac76
AAA_16
Motif
Other DBs
NCBI-GeneID:
119226899
NCBI-ProteinID:
XP_037341164
LinkDB
All DBs
Position
18:317638..336803
Genome browser
AA seq
1818 aa
AA seq
DB search
MSVNELYAKYTRVWIPDPDDVWRAAEIVRDYKEGEAVLHLTLEDDTPLEYPVGPKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYEQLHIYG
EEVIRAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSTSDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFNQQYRIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEYKDLCLTSAEDFTFTSMGENIFIEGVN
DAADLEKTREAFTLLGIKEGNQSSIFKVIASILHLGNIEICSQRDGESCHVSRNDLHLKH
FCTLLGVELKQMEHWLCHRKLVTATETYVKNMSTKQAENARDALAKHIYARMFDWIVEHI
NKALHTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDENWAQKLYKQHSASAHFQK
PRMSNVSFIIVHFADKVEYQSEGFLEKNRDTVYGEQINILKASEFQLVADLFHDKDDVAP
PKSSRVNVRPAKSTPKAPNKEHKKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDLKEP
FMFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLLKKSEMASADKKLVCR
NLLETLIKDHDMFQFGKTKIFFRAGQVAYLEKLRADRFRSACIKIQKTVRGWLQRVRYRK
VRKMAVSLQRYGRGYLARRHADLLRQTRAALLCQKQYRMVRDRRAYLRVRRAVVTIQAFT
RGMFTRRIFQEFMLHHKAMLIQKVVRGWLQRRRFRRARDAAITIQCLFRRVRARRRLQQL
KVEARSAERLKSLNSGMENKIVQLQRKMDDQSKELRTQNEQLLQVNNKLQKQLEQVKTQQ
GEAGGAGGAQVSSLQEELDRLKEELQEASAQRKRMEEEHGNEKTGLQLRVEELEKENALL
KSEKEEMNHRILQQTKSFEEDSSSVSLMETSLQAELNAERQRYQNLLKQMTTVEQRYDNL
KEELSMSKFQPGHRRNPSNQSSLESDSNYTSISTSELGDTEDSIQLVEEMGVEKAAMDIG
LFMKLQKRVRELEQERRRLQINLDKMEELARSRGSESRSSTSEQETADLAYNNLKRQELE
SENKKLKKDLNELRRSISERASENDPSNELQDSYNLLLSQLRSANEELEGRKEEVLILRT
QIVSAAHIRENNQPRQQSSEAPEVSEDKEPVDSEEALKAYHGLCESKKLLEAQLQTQSRQ
HGDELEALHTQIELLRDDIEKKQEILSYTASLSPEARVEYSVQQEITRLTNDNLDLKELV
EKLEKNERKLKKQLRIYMKKVQELEASQAEAQTNRSRPPLSRQVTVQRKEKDFEGMLEYY
KEDEALLFKTLITDIRPNTVSATVPCLPAYILFMCIRHADYVNDDQKVESLLTSTINAIK
KVLKKNNEDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQNTGKQNEHCLKNFDLAEYRQV
LSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKTMGYRNRSSSMDVDSGGPA
TYTLKALIRQLGQFHGTMRDHGLDPEIVGQVVRQLFHCVNAVTLNNLLLRKDVCSWSNGM
QLRYNTSQMEEWLRANNLSHSKAAETLEPIIQAAQLLQVKKKTTQDAEAICSLCSALSTQ
QIVKILNLYTPLNEFEERVSVSFIRSIQTRPQQRHDPPQLLMDTKHMFPVLFPYTPSALS
LETLHIPASLGLDFLIRV
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaacgagctctacgcaaagtacacgcgggtctggatccccgacccggacgat
gtgtggagggccgcagagatcgtcagggactacaaggaaggggaggcggtgctccacctc
acactggaggatgacacgcctctggagtaccccgtgggtccaaagagtaaccccctccct
ttcctgcgtaaccctgacatcctggtgggcgagaacgacctcactgctctcagttacctg
cacgaacctgcagtcctgcacaacctgaaggtccgcttcctggagcccaaccacatctac
acgtactgcggtattgtgctggtggccattaacccgtacgagcagctgcacatctatggg
gaggaggtgatccgggcctacagcggtcagaacatgggcgacatggaccctcacatcttc
gctgtggcggaagaggcctacaagcagatggccagagacgagaagaaccagtcgatcatc
gtcagcggggaatcaggagcgggaaagaccgtttccgccaagtacgccatgcgcttcttc
gccacagtggggggctcgaccagcgacactaacgtggaggagaaggtgctcgcctccagt
cccatcatggaggccatcggaaacgctaaaaccacccgaaacgacaacagcagccgcttt
gggaagtacattgagatcggcttcaatcagcagtaccgcatcattggggccaacatgagg
acgtacctgctggagaagtcccgcgtggtctttcaggcagaggacgagaggaactatcac
atcttctaccagctgtgtgcctcggccagcctaccggagtacaaggacctctgcctgacc
agtgctgaagacttcaccttcacgtctatgggagagaacatcttcattgagggagtgaat
gatgcagcagacttggagaagaccagggaggccttcacactgctggggataaaggagggc
aatcagagcagcatctttaaagtcatcgcctccatccttcatctgggaaacattgagatt
tgctcacaacgagacggggagtcctgtcatgtctcgagaaacgacctccatctgaagcac
ttctgcacgttgctgggggtggagttaaagcagatggagcactggctctgtcacaggaag
ctcgtcacggcgaccgagacctacgtgaagaacatgtcaaccaagcaggcggagaacgcc
cgcgacgcgctcgccaaacacatctatgctcgcatgtttgactggatcgtggagcacatc
aacaaggccctgcacacctcctccaaacagcactccttcatcggagtcctggatatctat
ggctttgagacgtttgaggtgaacagcttcgaacagttctgcatcaactacgccaacgag
aaacttcagcagcagttcaactctcacgtgttcaagctggagcaggaggagtacatgaag
gagcagatcccctggacgctcatcgacttctacgacaaccagccctgcatcgacctgatc
gaggctcggcttggcatcctggacctgctggacgaagagtgcaaggtgccgaagggcacg
gacgagaactgggcccagaagctgtacaagcagcactcagccagtgctcactttcagaaa
cctcgcatgtccaacgtctccttcatcatcgtacacttcgctgacaaggtcgaatatcag
agtgaaggttttctggagaagaaccgggacacggtgtacggggagcagatcaacatcctg
aaggccagtgagtttcagctggttgcagatctctttcatgacaaggacgacgtggccccc
ccaaagtcctccagagtgaacgtcagaccggccaagtcgacccctaaagccccaaacaaa
gagcacaagaagaccgtgggacatcagttccgcagctccctccatctcctgatggagaca
ctgaacgctacgactcctcactacgtccgctgcatcaaacccaacgacctgaaggagccc
ttcatgtttgattccaggagagcggtccagcagctcagagcctgtggagtcctggagacg
atccggatcagtgcagccgggtatccgtccaggtggacctacccagacttcttcaaccgg
taccgggtgctgctgaagaagtccgagatggcctcggcggacaagaagctggtgtgcagg
aacctgctggagactctcatcaaggatcacgacatgttccagttcgggaagacgaagatc
ttcttccgggccgggcaggtggcctacctggagaagctccgcgccgacaggttccgctcg
gcctgcatcaagatccagaagacggtgcgcggctggctgcagagggtccggtaccgcaag
gtccgcaagatggccgtcagcctgcagcgctacgggaggggctacctggcccgcaggcac
gctgacctcctgcgtcagaccagagccgccctgctctgtcagaagcagtaccgcatggtg
agagacagacgggcgtacctgagggtgagacgggctgtcgtcactatccaggccttcacc
agagggatgttcacccgccgcatcttccaggagttcatgctgcaccacaaggccatgctg
atccagaaggtggtgcgtggctggctccagaggcggaggttcaggcgcgctcgtgatgcc
gccatcaccatccagtgtctcttcaggcgggtccgagcccgccggcgcctgcagcagctg
aaggtggaggcccgctccgccgagcgcctcaagagcctcaacagcggcatggagaacaag
atcgtccagctgcagaggaagatggacgaccagtccaaggagctccgcacacagaacgaa
cagctgctgcaggtcaacaacaagctgcagaaacagctggagcaggtgaagacccagcag
ggagaagcaggaggagcaggaggagcccaggtctcctcgctgcaggaggagctggaccgg
ctgaaggaggaactgcaggaggcgtcggcccagaggaagaggatggaagaggagcacggc
aacgagaagacggggctccaactgcgggtggaggagttggagaaagagaacgctctgctg
aagagtgagaaggaagagatgaaccacaggattcttcagcagactaagagctttgaagag
gacagcagcagtgtgtctctgatggagacatcgctgcaggcggagctgaacgcagagagg
cagcgctaccagaacctcctcaagcagatgaccacggtggagcagagatacgacaacctg
aaggaggagctgtccatgagcaagttccagcctggccacaggaggaacccgtccaatcag
agcagcctggagtccgactccaactacacctccatctccacctcggagttaggagacact
gaagactccatccagctggtggaggagatgggcgtggagaaggccgccatggacatcggc
ctgttcatgaagctgcagaagagagtccgagagctggagcaggagaggaggaggctgcag
atcaacctggacaagatggaggagctggccagaagcaggggttcagagtccagaagctcc
acctcggagcaggagacggctgatctggcctacaacaacctgaagaggcaggagctggaa
tcggagaacaagaagctgaagaaggacctgaacgagctgaggaggtccatctctgagcga
gcgtctgagaacgacccgtccaatgagcttcaggacagctacaacctgctgctcagccag
ctccgctcagccaatgaggagctggagggccgtaaggaggaggtcctcatcctgagaact
cagatagtcagcgccgcccacatcagggagaacaaccagccaagacagcagagcagtgaa
gctccggaggtgagtgaggacaaagagccggtggacagcgaggaggctctcaaagcgtac
cacggactgtgtgagtcaaagaagctgctggaggctcagctgcagactcagtccaggcag
catggggacgagctggaagctctccacacgcagatcgagctgctgagggacgacatcgag
aagaagcaggagatcttgagctacacggcgtctctgtctccggaggcccgggtggagtac
agcgtccagcaggagatcaccaggctcaccaacgacaacctggacctcaaggagctagtg
gagaaactggagaagaacgagaggaagctgaagaaacagctcaggatctacatgaagaag
gtccaggagctagaagcttctcaggctgaagctcagaccaaccggtccagacctcctctg
agccgccaggtgacggtccagaggaaagagaaggactttgagggcatgctggagtactac
aaggaggatgaggccctactgtttaagacactgatcacagacatcaggcctaacaccgtg
tcggccacagttccgtgcctgccggcttacatcctcttcatgtgcatccgccacgccgac
tacgtcaacgacgaccagaaggtggagtccctgctcacctccaccatcaacgccattaag
aaggtgctcaagaagaataacgaggactttgagatgacgtccttctggctggcgaacacc
agccggctgcttcactgcctgaagcagtacagcggagatgaggcgtttatgacccagaac
acgggcaaacagaacgaacactgcctgaagaacttcgacctggccgagtaccgacaggtg
ctgagtgacctctccatccagatctaccagcagctcatcaaggtggctgagggcatcata
cagcccatgatcgtgtcggccatgttggaaagcgagagcatccccagcctggcgggggtc
aagacgatgggctacaggaaccgctcgtccagcatggacgtggacagcggcgggcccgcc
acctacaccctgaaggcgctgatccggcagctgggccagttccacggcaccatgcgggac
cacggcctggaccccgagatcgtgggtcaggtggtgcgtcagctgttccactgcgtcaac
gccgtcaccctcaacaacctgctgctgcgcaaagacgtgtgctcctggagcaacggcatg
cagctcaggtacaacaccagtcagatggaggagtggcttcgagccaacaacctgtcccac
agtaaagctgcagagaccttggagccgatcatccaggccgctcagctgctgcaggtgaag
aagaagacgactcaggacgccgaggccatctgctcgctgtgcagcgccctcagcacgcag
cagatcgtgaagatcctgaacctctacactcctctgaacgagtttgaggagcgagtcagt
gtgtccttcatcaggagcatccagacccgtcctcagcagagacacgacccccctcagctc
ctcatggacaccaagcacatgttccccgtcctgttcccctacacgccgtccgccctcagc
ctggagacgctgcacatccccgcctccctcggcctcgacttcctcatccgggtctga
DBGET
integrated database retrieval system
