Pungitius pungitius (ninespine stickleback): 119226910
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Entry
119226910 CDS
T07626
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119226910 (pum3)
03009 Ribosome biogenesis [BR:
ppug03009
]
119226910 (pum3)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119226910 (pum3)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119226910 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Bmt2
Endonuc_BglI
Msl2-3_C
Motif
Other DBs
NCBI-GeneID:
119226910
NCBI-ProteinID:
XP_037341188
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All DBs
Position
18:11071951..11080107
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AA seq
651 aa
AA seq
DB search
MGLRMEAKSKKIYSPKDGKKFPQKGKDSMGTKLGGKPGGKKPFKPFNNTERKGRPKGGDG
GNREHKFSKADGGPQKRKMPFKAKNKEGEGPVFKKMKKGELDPKKEMTEEELKKNRLQIK
RDLKNTRQEAEKKDMFQIVRQCKQVWGDLRRKKCDNDLKKKLMTELHELVRGKIKQMAYA
HDSVRVLQCFIQFGSHEQRQEVFEEVKEDVINLCKSKYGKHVVKKLLTYGNKELVGVVML
TFKGHVRQMLRHAMASSIIEYAYNDKAVLAQRLMLTEGLYGNTFTICKSTICNTIEKVAE
ANPDKLKNIIDDMKGILTPMAQKEQVIKHSLVHKVFLDFFLFAPDKPRAEMIESIREAVV
YMAHTHDGARVAMHCFWHGTAKDRKVIIKTMKTYMMKFATGEFGHLVLLAMFDCVDDTKL
VKQAVLSEILASLDEVISNKYGKKVLLYLLSPRDPAHLLPEIIKVLQKGDGNAHSKKDMA
VRRKELLEVVSPPLLEHLRDNAATMVTDKASSVTISDILASACGDLRPAMTAVAQLTKHE
LVPGGVDGQLHMAEHPAGHLVLKWLIEQDMTLAEAGKEERFGRILLDTVGTDTLKTWVKV
NRGAMVLCSLLNSYDKSVAAEVKAALVSIKSELSSISNNKGAEILLENLNK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggactgaggatggaggctaaatccaaaaaaatctattctcctaaagatggaaagaag
tttccacagaaaggcaaagattccatggggaccaaacttggtggcaagccaggtggtaag
aagccctttaaaccttttaacaacacagagagaaagggcagaccaaagggcggagatggc
ggcaatagagaacacaaattctccaaagctgacggagggccgcagaagagaaaaatgcca
tttaaagccaaaaataaagaaggtgaaggtccagtgttcaagaagatgaagaaaggtgag
cttgatccaaagaaggagatgaccgaggaggaacttaagaagaacaggttgcagattaag
agggatctgaagaataccagacaggaggcagagaagaaggacatgttccagatcgtccgt
cagtgcaaacaagtgtggggggacctcagaaggaagaagtgcgacaacgacttgaagaag
aaactgatgacggagcttcatgagctagttcgcgggaagatcaaacaaatggcgtatgct
catgactctgtgcgagtgctgcagtgtttcatccaatttggcagccacgagcagagacag
gaggtgttcgaggaggtcaaagaggatgtcatcaacttgtgtaagtcaaagtacggcaaa
cacgtggtgaaaaagctgctgacgtacgggaacaaggagctggtcggggttgtgatgcta
acattcaaaggtcacgtgcgtcagatgcttcgccacgccatggcctcgtccatcatcgag
tacgcctacaacgacaaagccgtgctggcacagagactcatgctcaccgaggggctgtac
gggaacaccttcaccatctgcaagtcaactatatgcaacaccatcgagaaagtcgcagag
gcgaatccggacaagctgaaaaacatcatcgacgacatgaagggaattctcacgcccatg
gcgcagaaagaacaagtgatcaaacactctctggtccacaaagtcttcctggacttcttc
ctgtttgcacctgacaaaccgagagcggaaatgattgagtccatccgagaggccgttgtc
tacatggctcacacacacgatggagcacgagtggcaatgcactgtttctggcacgggaca
gctaaggacagaaaagtcatcatcaaaactatgaagacctacatgatgaaatttgccacg
ggagagttcggtcacctggttcttctcgccatgttcgactgcgtggacgacaccaagctt
gtcaagcaggccgtgctctcagagatcctggcgtctctggatgaggtaatcagtaataaa
tatggcaagaaggttttgctgtacttgctgagtcccagagaccccgcccatctgctgccg
gagatcatcaaggtgctgcagaaaggagacggaaatgcccacagtaaaaaagacatggca
gttcggaggaaggagctgctggaagtcgtctcccccccgctgctggagcacctccgtgac
aatgctgcgaccatggtgacggacaaggcctccagcgtcaccattagtgacatcctggcg
tccgcctgcggcgacctgcggcccgccatgacggccgtggctcagctgaccaaacacgag
ttggtaccaggaggggttgacggacagcttcacatggcggagcatccggctggacacttg
gtgctgaaatggctcatagagcaggacatgacactggctgaggccggcaaggaagagcgg
ttcggcaggatattgttggacactgtgggaacagacacactgaagacctgggtcaaagtc
aacagaggagccatggtgctgtgtagcctgctgaacagctacgacaagtctgtggctgca
gaagtgaaggcggcgctggtgtccatcaaatcggagctcagcagcatcagcaacaacaaa
ggagctgaaatcctgctggagaatctgaacaagtag
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