Pungitius pungitius (ninespine stickleback): 119226923
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Entry
119226923 CDS
T07626
Symbol
arvcfa
Name
(RefSeq) splicing regulator ARVCF isoform X1
KO
K28154
splicing regulator ARVCF
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119226923 (arvcfa)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119226923 (arvcfa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
V-ATPase_H_N
Atx10homo_assoc
Adaptin_N
Arm_2
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
119226923
NCBI-ProteinID:
XP_037341210
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Position
18:6767921..6780447
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AA seq
890 aa
AA seq
DB search
MPAEVKEEQISEGPPPLSLSQEAREATLDNPTANDELDTPTSIASVMTSTNESSTETDTP
QQTDTEESKPVEQEGEQAPGDAQEPSETRQEDFPSSDTTNPNVPTPDVQGKNPTAANTEP
AEPLTPTTPTSSTTTAPSQPPAVQKPPEGHQPVSRDRQSRVYTLPDSYRGLGGDVCAAGY
GSLSRATVHGYWPAKSFQPGAHYTLPFLRDSYAPAGLSSQAEEDGLSQRGENPPDTKAER
PAASYPTLGGIHQFRPITTMELLREPSRTRGGYDDAFMAQLEGNLNPFFQAMCRAQTLQF
PHKRSSMVSLDSIRRDPRWRDPNLHEVISMLSHPMDPVKSNAAAYLQHLCYESDRIKQEV
RQLNGVPILVELLDHPKPEVHRKACGALRNISYGKDHNNKMAIKNCDGIQALVRLMRKSS
SIEVKELVTGTLWNLSSHEPLKMMVINNGLQTLTDEIIIPYSGCRRDSANPSQLLSAEWN
TVFKNTSGCLRNVSSDGAEARQRLRDCEGLVDALLHALQSAVVNKDTDNKSVENCVCILR
NLSYHVHKEIPGAERFQEPHASHLMRSVGHQKKKNETDCFGGKRPKEEWFNQGWKKGLLD
RKYGTLDLPKRTEQMKGLELLYQPEVVRLYLSLLTCSQNHNTLEAAAGALQNLAAGHWAW
SSYIRATVRKEKGLPVLVELLRSDVDKVVRAVAIALRNLAMDRRNKDLIGSYALRDLVGN
LPCGQQHPAKNLEGDTVVSILNTIHEIITDSPENARALIQGHAVQKLVAINKSSQVARET
KAASHVLQTIWAYKDLRTALMKAGWNKSHFKTTTTGGTKKSKSIKQGGDDITLPLMDKNQ
EPNDRAGDGKGPVVERDTLQAISERKHFIRAGRPAVGLMDNKPPPLDSWV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgaagtgaaagaggagcagatttcagaggggcctcctccactctctttgtca
caggaggcgagggaggcgactctggataacccgactgccaacgatgaactcgatacgccc
acctcgatcgcctccgtgatgacctcgaccaatgagagctccacggagactgacacgccg
cagcagacagacactgaggagtccaagcccgtggaacaagagggtgaacaggcccccggt
gacgcccaagaaccctcagagacacgccaggaggacttcccgtcatctgacacgaccaat
cccaatgtcccgactccagatgtccagggtaaaaatcctactgccgcaaacacggaaccc
gccgagcctctgacacccaccacgccgaccagcagcaccaccacggcgccctctcagcct
ccggcggtgcagaagccgcccgaggggcatcagccagtgagccgggacaggcagagcaga
gtgtacaccctccccgacagctacaggggcctcggcggggacgtatgcgcggcgggctac
ggaagcctgtcccgcgccaccgtccacggctactggcccgccaagagcttccagcccggg
gctcactacaccttgcccttcctcagggacagctacgctccggcaggccttagcagccag
gcggaggaggacggcctcagccagcggggagaaaaccctccggacacgaaggcggagcgc
ccggctgccagttacccaacactgggggggatccaccagttcaggccgatcaccaccatg
gagctcctcagggagccctccaggaccagaggtggatacgatgacgccttcatggcccaa
ctggaggggaacctgaatcctttcttccaggccatgtgccgagcacagaccctgcagttc
ccccacaaacgcagcagcatggtcagcctggacagcatccgcagagacccgcgctggagg
gaccccaacctgcatgaggtgatatcgatgctcagccacccgatggacccagtcaagtcc
aacgccgccgcctatttgcagcacctgtgctatgagagcgaccgcatcaagcaggaggtg
cgccagctcaacggggtgcccatcttggtggaattattggaccacccgaagcctgaggtc
caccgcaaggcctgcggggctctgcgcaacatatcctacggaaaagaccacaataacaaa
atggccatcaagaactgcgatggcatccaagctttagtcagactgatgaggaagtcaagc
agcattgaggtcaaagagttagtcacaggaactctgtggaacctctcctcacatgagcca
ctgaagatgatggtgatcaacaatgggcttcaaactctgactgatgagatcatcatccca
tactcgggatgtaggagagactcagccaacccctcacaactgctgagtgctgagtggaac
accgtcttcaagaacacctcgggatgtctgaggaacgtgagctcagatggagcggaggct
cgccagaggttgagggattgcgaggggctagtggacgcgctcctgcacgcccttcagtcc
gctgttgtcaacaaggacactgataataagtcagtggagaattgcgtgtgcatcctgcga
aacctgtcctatcatgttcacaaagagattccgggagcggagcgatttcaggaaccccat
gctagtcatctgatgagatcagtgggacaccagaagaagaagaatgagaccgactgcttt
ggagggaaaagacccaaagaggagtggttcaatcaaggttggaaaaagggattattggac
aggaaatacggtacattggatttaccaaaacgtacagagcaaatgaaaggcttggaactg
ctgtaccagccagaggtggtgaggctctacctctctcttctcacctgcagtcagaaccac
aacaccctggaggcagccgcgggggcgctgcagaacctcgctgcgggtcactgggcttgg
tccagctacatccgggccacggtgagaaaagagaaaggactgcctgttctggtggagctg
ctgcgctctgacgtggacaaagtggtgcgagccgtggccatcgctcttcgcaacctggca
atggacaggaggaacaaagacctaatagggagctacgctctgagggaccttgtcggtaat
ctgccatgtgggcagcagcacccagcgaagaatctcgagggggataccgtggtgtccatt
ctgaacaccatccatgagatcatcaccgacagcccagagaacgcccgagcgctcatacag
ggccacgcggtgcagaaactggttgccatcaacaagtccagccaagtggctcgggagacc
aaggcagcttcccatgtgcttcagacaatatgggcctacaaggacctgaggacagctctg
atgaaggctggttggaacaagagccactttaagacaacaactactggagggactaaaaaa
tccaagagtataaagcaaggcggcgatgacatcaccctgcctctcatggacaaaaatcaa
gagccaaatgacagagctggagatggaaaagggccggttgtggaaagagacactctccag
gcgataagtgagagaaaacacttcatcagagctggcagacctgcagtgggcctcatggat
aacaaacctccaccactggactcctgggtgtga
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