Pungitius pungitius (ninespine stickleback): 119226953
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Entry
119226953 CDS
T07626
Symbol
csgalnact1a
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ppug01100
Metabolic pathways
Module
ppug_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119226953 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppug01003
]
119226953 (csgalnact1a)
Enzymes [BR:
ppug01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
119226953 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
119226953 (csgalnact1a)
Glycosyltransferases [BR:
ppug01003
]
Glycan extension
O-Glycan
119226953 (csgalnact1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Motif
Other DBs
NCBI-GeneID:
119226953
NCBI-ProteinID:
XP_037341256
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All DBs
Position
18:complement(4109357..4122299)
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AA seq
580 aa
AA seq
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MLRRGLLARVSRVGGALVLLCCSLSLLYVMTCGPPHTDDAPLSSHALPRAEPHHPGPGGT
GGAGAAGTGGARAGAAQSGGPPAAQSYQVLLQEREEQHRLHISSLKKQIAQLKEALQERS
QQLKGVQESLKRPAGGEDAGAAGPPGGAPPPADSQGARSQQADLQEFLRSQLSKAEVSAG
ARLPSEYAVVPFESFTLQRVYQLETGLTRHPEEKPVRKDKREELGEVLETALHSLNAAPS
QQDRQTGKVYTPSDFMEGITRTEKDKGALYELTFRGESSNDFRRLVLFRPFGPLMKVKNE
KVNTAGVPINVIVPLSRRADKFKHFMHNFREVCVRQDGRVHLTVVYFGNEQMSEVRSTLE
NTSREVHFKNFTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLN
TQPGKKVFYPVLFSQYNPALIYGGLEHVPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDFI
NIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKRCGDELPPDQYRMCM
QSKAMNEASHGQLGMLLFRHEIEAHLRKQKQQQNSIPKKS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccgcggcctcctggcccgggtgtcccgcgtcggaggcgcgctggtgctcctc
tgctgctccctgtcgctcctctacgtgatgacctgcggcccgccgcacaccgacgacgcc
ccgctcagcagccacgccctcccccgcgccgagccgcaccaccccggcccggggggcacg
ggtggggcgggggccgccggcaccgggggagcccgggccggggccgcccagagcggtggg
ccccccgccgctcagtcttatcaggtgctcctgcaggagcgcgaggagcagcaccgcctc
cacatctcctcgctgaagaagcagatagctcagctgaaggaggccttgcaggagcgcagc
cagcagctcaaaggcgtgcaggagagcctgaagagacccgccggtggggaggacgccggg
gccgccgggcccccgggcggcgcccccccccccgcggactctcagggggcccggagccag
caggccgacctccaggagttcctgcggagccagctgtcgaaggcggaggtgagcgccggg
gcgcggttgcccagcgagtacgcggtggtgccctttgagagtttcaccctgcagcgggtg
taccagctggagacggggctgacgcgtcaccccgaggagaagcccgtgaggaaggataag
cgagaggaactgggggaggtgctggagacggccctgcacagcctcaacgcggcgccgtcg
cagcaagaccgccagaccggcaaagtgtacacaccctccgacttcatggaaggtatcacc
cgaacagagaaggacaaaggcgcgctgtacgagctgaccttcaggggcgagtcgagcaat
gacttcaggcgcctggtcctcttccgtcccttcgggccgctgatgaaggtgaaaaacgag
aaggtgaacacggccggcgtccccatcaacgtcatcgtgccgctttccaggcgcgccgac
aagttcaaacacttcatgcacaacttcagggaagtctgtgtgcgccaggacggccgggtc
catctgacggtggtgtattttgggaacgagcagatgagcgaagtccgcagcactctggag
aatacgtccagggaagttcattttaagaacttcactctgctgcagctggatgaggagttt
tctcgggggcggggcctagacgtcggggcgcgagcctggaagggaggcaacgtgctgctc
ttcttctgcgacgtggacatctacttcaccgccgacttcctcaacacgtgccgactcaac
acgcagcccggtaaaaaggtgttctacccggtgttattcagccagtacaaccccgccctg
atctacggaggtctagaacacgtcccgcctgtggaacaacagctggtgatcaagaaagac
acggggttctggagggatttcggtttcggcatgacctgccaatacaggtccgacttcatc
aacataggaggttttgacatcgacatcaaaggctggggaggcgaggacgtccacctgtac
aggaagtacctccacagcaacctcctggtggtccgagcgccatcgcgaggcctgttccac
ctgtggcacgagaagcgctgcggcgacgagctgcccccggaccagtaccgcatgtgcatg
cagtccaaggccatgaacgaggcctcgcacggccagctggggatgctcctcttcaggcac
gagatcgaggctcacctccgcaagcagaagcagcagcaaaactccatccccaagaagtcg
tga
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