Pungitius pungitius (ninespine stickleback): 119227006
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Entry
119227006 CDS
T07626
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119227006 (kcmf1)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119227006 (kcmf1)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119227006 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
TFIIA
Zn_SUZ12
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
119227006
NCBI-ProteinID:
XP_037341345
LinkDB
All DBs
Position
18:complement(4004875..4010980)
Genome browser
AA seq
391 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRFKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
YDLYYGGDTFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFTAHLTLEHRAPRDLDESSSVRHVRRMFHPGRGLGGPRARRTNMHFTSGSTGG
LSSSSSQSSTYTPSNREAMDPIAELLSQLSGVRRAAGGQINSSGPSASQLQQLQMQLQLE
RQQAQAARQQVETGRHATRRGNNNQGSAGNSIPPPNAATGNSAAAGESNPTSSSHSSQFL
LARLNEPKMSEAERQFLEGERADRSLFVQELLLSTLMREESSSSDEDERRDFADFGAMGC
VDVMPLDVALENLQLRERSFTGKEPPPPPPL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggcgtgagctgtgatgcgtgtttaaaagggaactttagaggaaga
cggttcaagtgtttaatttgctacgactacgacctttgtgcatcgtgctacgagagcggc
gccacgacaacgaggcacaccacagagcaccccatgcagtgtatattgaccagggtagac
tatgacttgtattacggaggagacactttttcagtagagcaaccccaatcattcacatgt
ccttactgtggcaagatgggctacaccgagacgtccctacaggagcatgtcacctcagaa
catgcagagacctccacagaggtgatctgtccgatatgtgctgccttgccaggaggggac
cccaaccatgtcacagatgactttacagctcacctcacacttgaacacagagcgccaaga
gatttagacgagtctagcagtgttcggcacgtacggcggatgttccaccccgggcgtgga
ctgggcggtcccagagcgcggcggacaaatatgcactttactagcggctccacggggggg
ctctcctcctcctcatcgcagagctccacctacacccccagcaacagagaggcaatggac
cccatcgcagagttgttgtctcagctgtctggcgtgcgtcgcgcggcgggcggccagatc
aactcgtcggggccttcggcctcccagctccagcagctccagatgcagctgcagctggag
cggcagcaggcccaggcggcgcggcagcaggtggagacgggccgccacgcgacacggcgc
ggcaacaacaaccagggcagcgccggcaactccatccctccgcccaacgcggccaccggc
aacagcgccgccgcgggcgaaagcaacccgacgtcctcatcccacagctcccagttccta
ttagcacggttgaatgaacccaagatgtccgaagcggagcggcagtttctagaaggggag
cgcgccgaccgcagcctgtttgtccaggagctgctcctctccacgctgatgcgcgaggag
agctcctcctccgacgaggacgagcggcgggacttcgccgacttcggggccatgggctgc
gtggatgtcatgcctttagacgtggcgctggagaacctccagctccgagagcgcagcttt
acggggaaggagcctccgccgccgccgcctctttga
DBGET
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