Pungitius pungitius (ninespine stickleback): 119227050
Help
Entry
119227050 CDS
T07626
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227050 (ric1)
Membrane trafficking [BR:
ppug04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
119227050 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
119227050
NCBI-ProteinID:
XP_037341393
LinkDB
All DBs
Position
18:6627862..6653644
Genome browser
AA seq
1449 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSQEEPFHIRPSSQRFYFAVLSETQLSIWFSRPSVLIVSYIESVK
AAAQFGVYQKAEWKPDDSMIAVATAKGYILLFDVLGGGDGKSLYEPVYPRGSPRVRVTPG
YKEEQCAPALSLEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHVLHWDGLGSNGRKAVC
LTTIPFSLDLQSARGGPSLDLEGVHICCMEYCVTLDGFAVVLSDGRLGFITPLGNTITTD
QLQGVWAADVNDGTCVAVNNKYRLMAFGCASGSVLVYMIDSTTGSMQLSHKLELTPKHFP
DVYNKTGPVKLICWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPV
KISSMSWGAEGYHLWVLPNKQERQGEEQQQQEEEEEMASPSQPSLQAGILQFQFIKSALT
VNPCTSNQEQVLLHGEDRLYLTCGDLSQVHSASEPRPHPHPHSHLNPHDGSPLHHPSEPD
SPLSQGLSTLLGHKHWHVVQIHSTYLESNWPIRFAAIDTAGQCMAVAGRRGLAHYSLCTR
KWKLFGNVTQEQNMTVTGGLAWWKDFVVVACYNFTDQQEQLRLYQRSSNLDNAFASVTKL
HSDTLLLNVFRDMVILFRADCSICLYSLERRNDSPHPTASVELLQEVSMSRYIPHPALVV
SVTLTSVRTETGITLKAPQQACMAESIMLNLAGQLIMLQRDRSGPQVREKETPANNKKLL
PFCPPVVLAQCVENVWTTCRSNKKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLS
RRIMLPFHINIYPLAVLFEDALVLGATNESVLYDGLQGSSEPLEALFPYCTVERTSQIYL
HHILRQLLVRNLGEQALMLAQSCASLPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVA
KFITEFPLFLQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQN
MEVPAVSRQHATLLFNTALEHGKWDLCRHMIRFLKAIGSGEMDTPPPTPTTQEPSSTGGF
EFFRNRSISLSQSADAIATGKFNLQKTFSMPSGPPVKGRDAECAENMYIDMMLWRHARHL
LEQVRLRDLGCFSAQLGFELIGWLCRERNRVARVEDFVSALKRLHKDFLWPFPVVPGGSI
SSPLKNGRCRTVLSTRLLKSQSADSLLNSDMDTAPPQAAPTSHTWLDGLGQTAKDMDAAP
SAHSNQHSPQTHDAFLSLLTNKVEEYSVGSATDLTETSSVVDGDWTMVDENSSALSLSQA
ELEHISMELANKGPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILRDANVIKQVIGFLDSP
EVPQETVQSVRGGLLAIDAWVSADCLGYKPFLNLIQPQLQDLMDSAAEQVQPEAFQPCGQ
SSKPGGGEGPGSAAAPRAEDGRGATAPPGLAPPSLEPAGSFPRPPSEDCPPELTEEQGED
EGAYDCTLS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctaaccggctggccccggcggctgctttgtccgctgaagagtcaggaggag
cccttccacatccgacccagctcccagaggttctacttcgccgtgctgtcagagacgcag
ctcagcatctggttcagccggcccagtgttttgatagtcagctacatcgagtccgtgaag
gcggccgcccagtttggtgtctaccagaaggccgaatggaaaccagatgactctatgatc
gctgtggcgactgccaaaggctacatcctcctgtttgacgtgttgggtggaggggacggc
aagtccctttatgagccggtctatccaagaggaagtcctcgtgtgagggttaccccgggt
tacaaggaggagcaatgtgccccggctttgtctttggagatgaagaagcctgtggatctg
gaggcccctataaccagtctgcagtcccttcaggaggacctgctggtctgcaccgcggac
ggctatctccacgtgctgcactgggacggactgggcagcaacggccgcaaggccgtttgc
ctcaccacgatccccttctcgctagacctgcagtctgctcgaggtggtccctctctagac
ctggaaggagtgcacatctgttgtatggagtattgtgttaccctggacggctttgctgtg
gtgcttagtgatggacgcctgggctttatcacgccgctcggcaacaccatcaccacggat
cagctgcagggcgtctgggcagcagatgtgaatgatggcacctgtgtggctgtcaacaac
aagtacagactgatggcctttggctgtgccagcggctcagtgctggtgtacatgatagac
agcacaacaggatccatgcagctctctcacaaactggagctcaccccgaaacacttccca
gacgtctacaacaagacgggcccggtcaagctaatctgctggtcgcctgactacagcgtt
gccatggttacatgggagtgtggtggcctatcgttgtggagtgtctttggagctcacctc
atctgcacactgggagaggactttgcgtatcgttctgatggtaccaagaaggacccggtt
aaaatcagctctatgagctggggagcagagggctaccacctatgggtgctccctaacaaa
caggagaggcaaggggaggagcagcagcagcaggaggaggaggaagagatggcctcacct
tctcagccctccctgcaggccggcatcctgcagttccaattcatcaagagcgccctgacc
gtcaacccatgcacgagtaatcaagagcaggtgttgctccatggtgaagaccgcctctac
ctgacctgtggtgacctctcgcaggtccacagcgcctccgagccacggccacacccacac
ccacactcacacttgaacccgcacgacggcagcccgctgcaccacccctccgaacccgac
tcccctctctctcagggactcagcactttactaggacacaagcactggcacgtggtccag
attcacagcacatacctagagagcaactggcctatacggtttgcagccatagacacggcg
ggccagtgcatggctgtagcagggaggcggggccttgcacactactccttatgcacaagg
aaatggaagctgtttgggaacgtcactcaggagcagaacatgacggtgacaggaggtctg
gcttggtggaaggactttgtggtggttgcctgttacaattttactgaccagcaagagcag
ttgaggctctatcaacgctcatcaaacctggacaatgcctttgcatccgtcacaaagctg
cactccgacactctgttgctcaacgtcttcagagatatggtcatcctgttcagagctgac
tgctccatctgcctctacagcttggagaggaggaacgacagtccacacccgacagccagc
gtggagttgttgcaggaggtgtccatgtctcgctacatccctcacccggccctcgtggtg
tcggtcacactcacctctgtgcgcacagagactggcatcacattgaaagccccgcagcag
gcctgcatggcagagagcatcatgttgaatctggctggccagctgatcatgctgcagagg
gaccgctcaggaccgcaggtacgagagaaggagacgcctgctaacaacaagaagctgcta
ccattttgtccccctgtggtgctggcccaatgtgtggagaatgtgtggaccacctgtcgc
tccaacaagaagaagcgccacctgctggaggccctgtggttgtcctgcggcgaggccggc
atgaaagtctggctgccgctgtttccccgagaccatcgcaagccacactcgttcctctcc
cggcgcatcatgctgcccttccacatcaacatctacccactcgctgtgctgttcgaggat
gccctggtcctcggggcgaccaacgagagcgtgctctatgacgggctgcaggggtcctct
gagccactggaggcgctgttcccgtactgcactgtggagaggacctcccaaatctacctc
catcacatcctgcggcagctgctggttcgcaacttgggtgaacaggcgctgatgctggct
cagtcatgcgcctccctcccctacttccctcacgtcatggagctgatggtgcacgtggtg
ctggaggaggaggcgacgtcgcgggagcccatccccgaccctctgctgcccaccgtggcc
aagttcatcacagagttccccctcttcctccagaccatcgttcactgcgccaggaagacg
gagtacgccctgtggaactacctgttcgccgctgtgggaaaccccaaggatctgtttgag
gagtgtctcatggcccaagacctggacacagcagcttcgtatctcatcatactgcagaac
atggaggttccagcggtgagcaggcaacacgccactctactcttcaacacggcgcttgag
catggcaagtgggacctttgccggcacatgatccgattcctcaaagccattggctctggg
gagatggatactccgcccccaacacccaccactcaggaacccagctcaactggtggattc
gagttcttcagaaatcgcagcatcagtttgtcacagtcggcagacgccatcgctacgggc
aagttcaacttgcagaagaccttcagtatgccctctggacctcctgttaaaggccgggac
gcggagtgtgcagaaaacatgtacatcgacatgatgctgtggcgccacgcccgccatctc
ctggagcaggtgcgcctccgcgacctcggctgcttctccgcacagctgggctttgagctc
atcggttggttgtgtcgcgaacggaaccgggtggcgcgcgtcgaggactttgtctccgcg
ctgaagaggctccataaggattttctctggcccttccccgtggttcccggggggagcatc
agctcgcctctgaagaacggacgctgtcgcacggtgctgagcacgcggctgttgaagtcg
cagtcggccgacagcctgttgaacagcgacatggacacggcgccccctcaggcggccccc
accagccacacgtggctggacggcctcgggcagacggccaaagacatggacgccgccccg
tcggctcattccaaccaacactcgccgcagacacacgatgccttcctctccctgctcacc
aacaaagtggaagagtacagcgtcggctccgccaccgacttgacggagaccagctcggtg
gtggacggcgactggacgatggtcgacgagaactcctccgccctgagcctgagtcaggcc
gagttggagcacatctccatggagctggccaacaagggcccgcacaagtcccaggtgcag
ctcaggtatctccttcacgtgttcatggaggcgggctgtctggagtggtgcgtcgtgatc
ggtctgatcctacgggacgccaacgtcatcaagcaggtgatcggcttcctggacagcccg
gaggttccacaggagacggtgcagagtgtccgcggcggcttgttggctatcgacgcgtgg
gtctctgctgactgcctcggatacaaacccttcctgaacctgatccagccgcagctccag
gacctgatggactcggcggctgagcaggtgcagcccgaggccttccagccctgcggccag
agctccaagcccggcggcggcgaagggccgggaagcgccgcggcgccccgagcggaggac
ggccgaggagcgacggctccgccgggcctggccccgccctccctcgaacccgccggaagt
ttcccccgtcccccctccgaggactgtcctcccgaactgacggaggagcagggggaggac
gagggcgcctacgactgcaccttgtcctga
DBGET
integrated database retrieval system
