Pungitius pungitius (ninespine stickleback): 119227126
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Entry
119227126 CDS
T07626
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04210
Apoptosis
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119227126 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119227126 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119227126 (sptan1)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119227126 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
119227126 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
119227126
NCBI-ProteinID:
XP_037341521
LinkDB
All DBs
Position
18:15439472..15469679
Genome browser
AA seq
2479 aa
AA seq
DB search
MDTAGAKVLETAEDIQERRQQVLDRYRRFKELSITRRTKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMISEGHFSSDTI
RTRLEELHRLWDLLLQRTKEKGTRLLQAQKLVQYLRECEDALDWISDKEAMASSEELGQD
LEHVELLQKKFEEFQTDLAAHEERVNEVNQLAAKLIQEAHPEAELIVRKQDEVNASWQRL
KGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGDAERLQQTHPQNASQIHLKKDELVTNWEQIRTLAAERHARLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRAT
DEAGQALLNTGHYASEEVKEKLAILSEEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKIIALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVAGRMEEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVARYEGLREPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEITGHEPRI
KAVTQKGEAMVEEGHFAAEDVKVKLSELHGRWDTLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSIDYGKDEDSAEALLKKHEALMSDLSAYGSSIHALKEQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEHGSIALRQDQIDNQLVTKEACSVSVRMKQVEELYGTLLELGE
KRKDMLEKSCKKFMLFREANELQQWINEKESALTNEEMGSDLEQVEVLQKKFDDFQKDLK
ANESRLRDINKVASELESEGLMAEEAPMVQAQQQEALGAAPGKDEADSKTASPWKNVRLA
VQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNT
DNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELN
TAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALL
ERHQEHRTEIDARAGTFQAFEQFGQQLLVRGHYASPEIQQKLEALDRERADLEKAWVQRR
MMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQE
EKIAALQSFADQLIGADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSR
DVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTG
NTLIQRGACAGSEDAVKARLSALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFW
LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMGSKAVDTS
QVKDKRDAVNGRFTKIKTMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYG
RDLTGVQNLRKKHKRLEAELGAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVDHWK
ELKDFSGARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHE
AFETDFTVHRDRVSDVCTNGEELIKKNNHHVDNISAKMSALRGKVSELERAAAQRKAKLD
ENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGI
TNITALKDQLLAAKHVQSKAIEARHASLIKRWNQLLSNSGTRKKKLLEAQEHFRKVEDLF
LTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHEAFRSSLSSAQADFNQLAEL
DQQIKSYQVVSNPYTWFTMDALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQH
ANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAME
EALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFK
HFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGNVSLQEYMA
FMISRETENVKSSEEIESAFRALSTENKPYVTKEELYQNLSKEQADYCLSHMKPYLDSKG
RELPSAFDFVEFTRSLFVN
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggataccgcaggggctaaagtgctggagacagccgaagacatccaagaacgccgacag
caggtgctggaccgctaccggcgcttcaaggagctgtccattacgcgccggaccaagctg
gaggactcttaccgctttcagttcttccgccgggatgccgacgagttggagaagtggatc
caggagaagctgcagatcgcctctgatgagaactacaaggacccctccaacctgcagggt
aagctgcagaaacatcaggcctttgaagctgaagttcaggccaacgccggggctatcatc
aaactggacgagactggaaaccttatgatcagcgagggacacttctcatctgataccatc
cgaactcgtctggaggagttgcatcgcctgtgggaccttctgctgcagaggacaaaggag
aagggaacgcgtcttctgcaggcccagaaactggtccagtacctgcgagagtgtgaagat
gccctggactggatcagtgacaaggaggccatggcctcgtctgaagagctggggcaggac
ctggagcatgtggagcttctgcagaagaagtttgaggaattccagactgacctggctgcc
catgaggaacgcgtgaacgaggtgaaccagcttgcagccaagctgatccaggaagcccat
cctgaggctgagctcatagtccgtaagcaggacgaggtcaatgcgtcctggcagcgcctg
aagggcctcgcacagcagaggcagggcaagctgtttggggcagctgaggtgcagcgcttc
aacagggatgtggatgagacaatcagttggatcaaggagaaggagcagctgatggcctct
gatgactttggacgtgacctggccagtgtgcaggccctgcttcgcaaacacgaggggctg
gagagagacctggctgccctggaagataaggtcaacacactaggtggcgatgcagagcgc
ctacagcagacacatccccaaaatgcttcacaaatccatttgaagaaagacgaactcgtc
accaactgggaacagattcggactctggccgctgagcgccacgcccgtctcaacgactcc
taccgtctgcagcgtttcactgcagacttcagggatctgaccagctgggtgacggagatg
aaagccctgatcaatgctgacgaactggccaatgacgtggccggagctgaagctctgctg
gaccgccaccaggagcacaagggagagattgatgctcatgaagacagttttcgcgccact
gatgaggcaggccaggccctgcttaatacaggacactacgcttctgaggaggtcaaggaa
aagctggccatcctctccgaggagaaggagtccctgctggagctgtgggaggtccgcagg
caacagtatgagcagtgcatggacctgcagctcttctacagagatactgagcaagttgac
aattggatgagcaaacaagaggccttcctcctgaatgaagacctcggtgattccctggac
agtgtggaggcactgctgaagaaacacgaggactttgagaagtccctgagtgctcaggaa
gagaagatcattgccctggatgagtttgctacaaaactaatccagaataaccactatgcc
aaagaggacgtggcaactcgcagagatgctctgctcagccgtcgcaacgcattgcatgag
cgcgctcagtctcgtcgcgctgccttggaggactccttccatctgcagcagttcttcagg
gactctgatgagctcaagagctggatcaacgagaagatgaagacggccacggatgaggct
tacaaggacccgtccaacctgcagggcaaggtgcagaaacaccaggcatttgaagctgag
ctgtcagccaatcagagccgcattgatgccctgcagaagtctggccaggagctgctggat
ggaaagcattatgcctctactgaggtggctggccgcatggaggaagtgagctcccagtgg
aagaaactactggaggccactgagcttaaaggcatcaagctgcgtgaggccaaccagcag
cagcagttcaacagaaatgtcgaggacattgagctgtggctgtacgaggttgagggccac
ctggcttcagacgactacggcaaagacctgactagtgtccagaacctccagaagaaacat
gctctgctggaggccgacgtggctgctcaccaggatcgcattgacggcataactatccaa
gcccgtcagttccaagaggcgggacactttgatgctgacaacatccgcaagaagcaggaa
gctttagtagcacgttacgaagggctgcgtgagcccatggctgcacgaaagcagaaactg
tccgactctctgcggctccagcagctgttcagagatgtggaggacgaggagacctggatc
cgcgagaaggagcctattgctgcctctactaacagaggcaaagacctgattggtgtccaa
aacttgctgaaaaagcaccaggcgttgcaggcagagatcaccggtcacgagcctcgcatt
aaggctgttacccagaaaggagaggccatggtggaggaagggcactttgccgcagaggat
gtgaaggttaagctttctgaactacatggacgctgggacacgctgaaggccaaggcctcg
cagaggagacaggatctggaggactctctgcaggcccagcagtactttgctgatgccaac
gaggctgagtcgtggatgagggagaaggagccgattgtggggagcatagactacggcaaa
gatgaggactctgctgaggctttgctgaagaagcatgaggccctgatgtctgacctgagc
gcctatggcagcagcatccatgctctgaaggaacaagcccagtcctgcaggcagcaagtg
gcaccgactgatgatgagaccgggaaggagctggtcctggccctgtacgactatcaggag
aagagtccccgggaagtgaccatgaagaagggagacatcctcaccctgctcaacagcacc
aacaaggactggtggaaggtggaggtgaacgaccggcagggctttgttcctgctgcttac
gtgaagaagctggatcctacccagtcctcttccagggaaaacctgctggatgaacacggc
agtattgcactgcgccaagaccagattgacaatcagcttgttaccaaggaggcctgcagc
gtgtctgtgcgcatgaagcaggtggaagagctgtatggtactctgttggagttgggagag
aagcgcaaggacatgttggagaagagctgcaagaagttcatgttgttccgtgaggccaat
gagctgcagcagtggatcaacgagaaggagagtgctctcactaatgaagagatgggctct
gacctggaacaggttgaggttctgcagaagaagtttgacgacttccagaaggacttaaag
gccaacgagtctcgtctgagggacatcaacaaagtggcgtctgagctggagtctgaaggc
ctcatggctgaggaggcccccatggttcaggctcagcagcaggaggcgcttggtgcagct
cctggcaaggatgaagccgattccaagactgcatctccatggaagaatgtacgcttggct
gttcaaacaacggctaactttaatacaatcaaggagctaaataatcgctggaggtccctg
cagcagctggctgaagaccggagcaacatgctgggcagtgcccacgaggtgcagcgattc
cacagggatgctgatgaaacaaaagagtggatagaggagaagaaccaggccctcaatacc
gacaactatggtcacgacttggccagtgtccaggctttgcagcgcaagcacgaaggcttt
gagagagacctcgcagctctgggggataaggtgaactctcttggggagacagcagagcgt
ctgatccagtcccacccagaggccgtggatgatattcaggagaagtgcaccgagctgaac
actgcctggagcagcctggtggggcgagctgatcaacgcaaagacaagctcggcaactct
cacgacctgcagcgcttcctctctgacttcagagatctgatgtcctggatcaatggcata
cgagggctggtgtcctcagaggagttggccaaagacgtgaccggagccgaggcccttctg
gaaagacaccaggaacaccgcacagagattgatgctcgtgctggaaccttccaggccttt
gaacagtttggtcagcagctgctggtgcgaggccactatgctagtcctgagatccagcag
aaactggaggctctagaccgcgagcgggccgacctggagaaggcttgggtgcagcgtcgc
atgatgttagaccagtgcctcgagctgcagctcttcaacagggactgtgagcaggcagag
aactggatggcagctcgtgaagccttccttgctagtgatgacaagggtgactcgctggac
agtgtggaggccctcatcaagaagcatgaagactttgacaaggccataaacgtgcaggag
gagaagattgctgccctgcagtcctttgctgaccagctgattggagctgatcattacgct
aaaccggagatattcaatcgccgcaatgaagtccttgacaggtggcgccggctgaaggct
cagatgatcgaaaagcgttccaagctgggtgaatcccagaccctgcagcagttcagcagg
gacgtggacgagatcgaggcctggatcagcgagaagctgcagactgcaacggatgagtcc
tacaaggaccccaccaacatccagctgtccaagctgctgagtaagcatcagaaacatcag
gcgtttgaggccgagctgcatgccaacgcagaccggatccgaggggtcatcgacaccggc
aacaccctgatccagagaggagcctgtgcaggcagcgaggacgccgtcaaggcgcgcctc
agcgctctggatgaacagtggcagttcctcgtcaacaagtctgcagagaagagccagaaa
ctcaaagaagccaacaagcagcagaacttcaacaccggcatcaaagactttgacttctgg
ctctctgaggtggaagcccttctcgcatctgaggattatgggaaagatctggcctcagtg
aacaacctgctgaagaaacaccagctgctggaggctgatatctctgcccatgaggaccgt
ctgaaggatctgaacggccaggctgacagcctgatgggcagcaaagccgtcgacacctca
caggtgaaggacaagcgcgacgctgtcaacgggcgcttcactaagatcaagacgatggcc
gccggtcgccgcgccaaactcaacgagtcccaccgcctgcatcagttcttcagggacctg
gatgatgaagagtcttggatcaaagagaagaagttgcttgtgagttcggaggactacgga
cgtgatttgacaggagtacagaacctgaggaagaaacacaagaggctggaggccgagctt
ggagcccacgagccggccattcagtcggtgctggacactgggaagaagctgtccgatgac
aacaccattggccaggaggagatccagcagaggctggctcagtttgtggaccactggaag
gaactcaaggacttctctggagccaggggacagaggctggaggagtcactggagtaccag
cagtttgtggccaacgtggaagaggaggaggcttggattaatgagaagttgaatctagtg
gggagcgaggactacggagacacactggctgctgtgcagggtctgctgaaaaagcatgaa
gcatttgagactgacttcacagtccacagggaccgagtcagcgatgtctgcaccaacgga
gaggagctgatcaagaagaacaaccatcacgtggacaacatcagtgccaagatgtcggct
ctgcgaggcaaagtgtcagagctggagagggccgccgctcagaggaaggccaaactggat
gaaaactctgctttcctgcagttcaactggaaggccgacgtggtggagtcctggattggc
gagaaagagaacagcctgaagacggatgactacggcagagacctgtcctctgtccagacg
ctgctcaccaagcaggagacgtttgatgccggtctccaggccttccagcaggagggtatc
accaacatcacggctctcaaggaccagctgctagctgccaagcacgtccaatcaaaagcc
atcgaagctcgtcacgcctccttgatcaagcgctggaaccaactgctgtccaactcgggc
actcgcaagaagaagcttctggaggctcaagagcacttcagaaaggttgaggacttgttc
ctgacctttgccaagaaggcctctgccttcaacagttggtttgagaatgcagaagaggat
ctgacggacccagttagatgcaactctctggaggagatccgggcgctgcgtgaagcccac
gaggccttccgctcctcgctgagctcggctcaggccgacttcaaccagctggccgagctg
gaccagcagatcaagagttaccaggtggtgtccaacccttacacctggttcaccatggac
gccctggaggaaacctggagaaacctgcagaagatcatcaaggagcgagagctggagctg
cagaaggagcagaggaggcaagaagaaaacgacaagttgcgccaagagtttgcgcagcac
gccaatgcgttccaccaatggctgcaggagaccaggacatatcttctggatgggtcgtgt
atggtggaagaatcgggtaccctggagtcccagctggaggccacaaagcgtaagcaccag
gagatccgggccatgcgcagtcagctgaagaagattgaagacctgggagcagctatggag
gaagcccttatattggacaacaagtacacagagcacagcacagtgggcctggcccagcag
tgggaccaactggaccagctgggaatgcggatgcagcacaacctggaacaacagatacag
gccaggaacaccactggagtaacagaggaggccctgaaggagttcagcatgatgttcaag
cacttcgacaaggagaagtccggccgtctgaaccaccaagagttcaagtcatgtctgcgc
tcactaggatatgaccttcccatggtggaggaaggagaacctgacccggagtttgaggcc
atactcgacactgtggatccaaacagggatggcaacgtctcgttgcaggagtacatggcg
ttcatgatcagccgcgagacagagaacgtcaagtccagtgaggagattgagagcgccttc
cgagctctcagcacagagaacaaaccctacgtcactaaagaagagctctaccagaacctg
agcaaggagcaggccgactactgcctctcacacatgaagccctatctcgacagcaagggc
cgggagctgccgtcagctttcgacttcgttgaattcacacgctcgctcttcgtcaactga
DBGET
integrated database retrieval system
