Pungitius pungitius (ninespine stickleback): 119227171
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Entry
119227171 CDS
T07626
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
KO
K19479
collagen type X alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
119227171
NCBI-ProteinID:
XP_037341575
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Position
14:complement(9970280..9974882)
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AA seq
654 aa
AA seq
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MDVRVASIFVIMVAFTSAHGDRYVVKKLVKAAPQYQPYSVKSQVVSVAGEPGAPGEPGPE
GPPGPPGPAGENAEGLPGPQGPPGPPGAPGRSIAGKPGSPGGPGKPGSHGATGEKGDTGA
PGSQGPRGAPGPSGSPGPAGLSATGKPGPSGLPGPRGSRGESGLKGHPGVPGLPGAKGDR
GVGIQGPQGETGPEGAMGAPGQPGEPGVGKPGPAGMPGEPGKSGTPGRDGATGPMGPQGL
KGHTGAPGVGMPGKPGENGAPGLPGGAGPKGHQGPTGATGAPGVPGFGKPGANGEKGERG
HTGATGATGAKGEQGPTGYTGATGATGPTGPAGPQGPTGFTGETGATGSKGDTGATGAQG
PKGNKGDQGAQGFAGKQGYPGAAGPPGPRGATGSTGDKGHVGAPGTPGSPGIPGPAGPKG
HPGRAGEPGASGSNGAPGSRGPSGPQGPAGAPGLKGHPGLPGPSGPAGLAAKGLPGPQGP
PGQPGDNGVDGAMGPAGPPGPPGPPGEVMFEKGMGMGEVMVKSPMSAFTASLITPFPADG
TPIKFDQIVYNAENHYDPETGIFTCQVPGVYYFSYSFHVNGANALVALYKNGQPVMFTYD
EYSKGFVDQMSGSTVLLLDEQDTVYVQIPDVDAIGVFAAENVHCSFSGFLIAST
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacgagtagcaagcatcttcgtcatcatggtggccttcacatccgcccatggg
gaccggtacgttgtgaagaagctggtgaaggccgcccctcagtaccagccctactctgtg
aagagccaggtggtgtctgtggcaggtgagcctggtgccccaggtgagcctggccctgag
gggcctcccggccctcctggccccgcaggtgagaacgctgaaggtctgcctggaccccaa
ggacctcctggacctcccggagctcctggacgctccatcgctggcaaacctggttcccca
ggtggacctggcaaacctggcagccatggagcaactggagagaagggagacactggagcc
cctggctctcagggaccaaggggagcccctggaccttctggaagcccgggacctgcaggc
ctctctgctactggcaagcctggaccttcaggtcttcctggcccaaggggatctagagga
gagtctggtcttaaaggacatccaggtgtacctggacttccaggcgctaagggtgataga
ggggtgggaattcaaggacctcagggtgagacagggccagaaggagccatgggcgcacct
ggacagccaggtgagcctggagttggaaagccaggaccagcaggtatgcccggtgagcca
ggcaagtcaggaaccccaggtagggatggtgccacaggtcccatgggaccacagggactt
aagggacacacaggtgccccaggtgtaggtatgcctggtaaaccaggtgagaatggtgcc
ccaggtctgcctggtggagctggccctaaaggccaccaaggaccaactggagccactggt
gcccctggagtcccaggatttggaaagccaggtgcaaatggggagaagggagagagggga
catacaggtgccacaggtgcaacaggtgcaaagggagagcaaggtccaacaggatatact
ggcgctacaggtgcaactggccccactggtcctgctggacctcaggggccaacaggtttc
acaggtgaaactggcgctactggttctaaaggtgacactggtgccactggagctcaggga
cctaagggaaacaagggagatcagggagcacagggatttgcaggcaagcagggttatcca
ggcgcagctggtcctcctggacccagaggtgccactggatcaacaggggacaaaggtcat
gttggtgcccctggtaccccaggttccccaggtatcccaggccctgctggaccaaagggt
catcccggccgcgcaggagagccaggtgcctctggttctaatggtgctccaggttccagg
gggccttcaggaccccaaggtcctgctggtgcccccggcctgaaaggacacccaggtctc
cctggtccttctggccctgctggtttggctgctaagggtctccccggacctcagggtcct
cccggtcagcccggtgacaatggtgttgatggagccatgggcccagctggccctcccggt
ccccctggtcctcctggtgaggttatgtttgagaagggcatggggatgggtgaggttatg
gtcaagtcccccatgtctgctttcactgcatctctgatcacccccttccccgctgatggc
acccctattaagtttgaccagattgtgtacaatgctgagaaccactatgaccctgagact
ggcatcttcacttgccaagttcccggagtttactatttctcctacagcttccatgttaat
ggagctaatgccttggtggctttgtacaagaatggccagcctgttatgttcacttatgat
gagtacagcaagggcttcgtggaccagatgtccggtagcactgtcctcttgctcgatgag
caggacacagtctatgtacagatccctgatgtagacgccatcggtgtctttgccgctgag
aacgtccactgctctttctctgggttcctcattgcttcaacgtga
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