Pungitius pungitius (ninespine stickleback): 119227262
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Entry
119227262 CDS
T07626
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04814
Motor proteins
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119227262 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119227262 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227262 (dctn1b)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119227262 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119227262 (dctn1b)
Membrane trafficking [BR:
ppug04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119227262 (dctn1b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
119227262 (dctn1b)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
119227262 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Motif
Other DBs
NCBI-GeneID:
119227262
NCBI-ProteinID:
XP_062413447
LinkDB
All DBs
Position
14:2322225..2340797
Genome browser
AA seq
1240 aa
AA seq
DB search
MSSDGGGRPVKVGSPVEVIGKGQRGTVAYIGNTLFASGKWVGVILDEAKGKNDGTVQGKR
YFTCEENRGIFVRQSQIQLVDDGADTTSPETPEAAAAAKVPKREILETPKSTKLRGLKPK
KTTARRPKQPTRPAGGKGAASGSASASAGEMSSSEPSTPAQTPLAAPVIPGLHSPGNAPP
PPPSKEEEALRGQVKDLEEKLETLKMKRTEDKAKLKELEKHKIQLEQLQEWKAKMQEQQA
ELQKHLKEAKREAKEAQEAKEHYMEEMSDTADAIEMATLDKEMAEERAESLQLEVDSHKE
KVEELTMDLEILKHEIEEKGSDGAASSYHVKQLEEQNGRLKEALVRMRDLSSSEKQEHVK
LQKQMEKKNVELDTLRGHKEKLQEEMAAAEKTIDELKEQVDAALGAEEMVEMLTERNLDL
EEKVREMRETVADLEAINEMNDELQENARETELELREMLDLGAAKVRESGKHVEAAQETV
ADYQQTIKKYRELTAHLQEVNRELTSQQEASAELQQQAPAEMFDFKIKFAETKAYAKAIE
MELRKMEVGQANRHVSLLTSFMPESFLRHGGDHDCILVLLLIPRLVCKAELISKQAQEKF
ELNESCVERAGLKGAVGEQLSFAGGLVYSLSLLQATLHKYEQALAQCSVDVYKKVGSLYP
EMSVHERSLDFLIDLLHKDQLDETVNVEPLTKAIKYYQHLYSIHLADQDEDCTLQLADHI
RFTQSALDCMAVEVGRLRSFLHAGQEKADLAVLLKDLETSCSDIRQFCKKIRRRMPGTDA
PGIPAALTFGQQVCDTLSDCRKHLTWVVAVLQEVAAAGAQMMSPLGEQEGLSAVKLEDVA
FKAGEQIYGSQGANPYECLRQSCSMVIATMNKMATAMQEGEYDSERPQNKNAPPVDLRAA
ALRAEITDAEGVGLKLEDRETVIKELKKSLKIKGEELSEASVRLSLLEKKLDSSSKDADE
RVEKIQTRLDEAQTLLKKKEKEFEETMDALQADIDQLEAEKAELKQRINSQSKMSADGLR
GAGPSGIASIVTGAAGAANVMPVSGSGLQVIDSPLLTQQIEAQRLCIKHLKNDNNRMKAE
KMRAQLASLPPLHVTKLPCREGGRPEVLSSALYRKTDQLLETLLQMSANVKVVDITGKSP
VTPGAQLLEQTARLQSLSDTLGRLKDEVAEHVVHQQAGARASSDFATFPSTSFVKAKEEK
QGDAVLVGRVMVPCHSGQEQVHRLVLSQSQLHRVHSLLQT
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgacgggggggggcggcccgtcaaggtgggctccccggtggaggtgatcggg
aaggggcagcgcggcaccgtggcctacatcggcaacacgctcttcgcctccggcaagtgg
gtgggggtcatcctggacgaggccaagggcaagaacgacggcaccgtgcagggcaagcgc
tacttcacctgcgaggagaaccgtgggatatttgtgagacagtcgcagatccagctggtg
gacgacggggccgacaccacgtcgccggagacgcccgaggccgccgccgccgccaaggtc
cccaaacgagagatcctggagacgcccaagtccactaaactgcgaggactgaagcccaaa
aagaccacggccagaaggcccaagcagcccacccgccccgcggggggcaagggggcagcg
tccggctccgcctcggcctccgccggcgagatgagcagcagcgagcccagcacgccggcc
cagacgccgctggccgctccggtcatccccggcctccactccccgggaaacgccccgccc
ccgccccccagcaaggaagaggaggcgctgcgcggtcaggtgaaggacctggaggagaag
ctggagacgctgaagatgaagcggacggaggacaaggccaagctgaaggagctggagaag
cacaagatccagctggagcagctgcaggagtggaaggcgaagatgcaggagcagcaggcc
gagctgcagaaacatctcaaagaggccaagagggaggccaaggaagcccaggaggccaag
gagcactacatggaggagatgtcggacacggcggacgccatcgagatggccacgctggac
aaggagatggccgaggagagggcggagtctctgcagctggaggtcgactcccacaaggag
aaagtggaggagctcaccatggacctggagatcctcaagcacgagatcgaggagaaaggt
tcggatggagctgcctccagttaccacgtgaaacagctggaggagcagaatgggaggctg
aaggaggcactggtcaggatgcgggacctgtcgtcctcggagaagcaggagcatgtgaag
ttgcagaagcagatggagaagaagaacgtggagctggacactctgaggggtcacaaggag
aaactgcaggaggagatggcggcggcggagaagaccatcgacgagctgaaggaacaggtg
gacgccgccttgggggcggaggagatggtggagatgctgacggagaggaacctggacctg
gaggagaaagtcagggagatgagggagacggtcgctgacctggaagctataaacgagatg
aacgacgagctgcaggagaacgccagggagacggagctggagctcagggagatgttggac
ctgggcgccgcgaaggtccgcgagtccgggaaacacgtggaggcggcgcaggagaccgtc
gccgactaccagcagaccatcaagaagtaccgcgagctcacggctcacctgcaggaggtg
aacagggagctcaccagtcagcaggaggcctcggcggagctgcagcagcaggcgcccgcg
gagatgttcgacttcaagatcaagttcgcggagacgaaggcctacgccaaggcgattgag
atggagctgaggaagatggaggtgggtcaggccaacagacacgtgtctcttctgacctcc
ttcatgcccgagtccttccttcggcacggcggggaccacgactgcatcctggtgctgctg
ctcatcccccgactcgtctgcaaggccgagctgatcagcaaacaggcgcaggagaagttt
gagctgaacgagagctgcgtggagcgagccgggctgaagggcgccgtcggggagcagctg
agcttcgcgggcggcttggtctactcgctgagtctcctgcaggccacgctgcacaaatac
gagcaggctctggctcagtgcagcgtggatgtctataagaaggtcggctctctctaccca
gagatgagcgtccatgaacgctctcttgatttcctcatcgaccttctgcacaaagaccag
ctggacgagacggtcaacgtggagccgctcaccaaggccattaaatactaccagcacctg
tacagcatccacctggccgatcaggacgaggactgcaccctgcagctggccgatcacatc
agattcacccagagcgccttggactgcatggcggtggaggtggggcgcctgcgctccttc
ctgcacgccgggcaggagaaggccgacctcgccgtgctgctgaaggacctggagacgtcc
tgcagcgacatcagacagttctgcaagaagattcgccgccggatgccgggaaccgacgcg
ccgggcatccccgcggctctcacctttgggcaacaggtgtgcgacaccctctcggactgc
aggaagcacctgacctgggtggtggcggtgttgcaggaggtggcggcggccggagctcag
atgatgtcgcccctcggcgagcaggaggggctgtcggctgtcaagctggaggacgtggcc
ttcaaggccggagagcagatttatggatcgcagggcgccaacccctacgagtgtctgcgg
cagtcctgcagcatggtcatagcaaccatgaacaagatggccaccgccatgcaggagggg
gagtacgactcggagaggcctcagaacaagaacgctccacccgtggacctgcgggccgcg
gcgcttcgggctgaaatcacagacgccgagggcgtcggcttgaagctggaggaccgggag
acggtcatcaaagagctgaagaagtctctgaagatcaagggggaggagctaagcgaggcg
agcgtccgtctcagcctgctggagaagaagctggacagctcgtccaaagacgcagacgag
cgcgtggagaagatccagactcggctggacgaggcccagactctgctgaagaagaaggag
aaggagttcgaggagacgatggacgccctgcaggccgacatcgaccagctggaggcggag
aaggcggagctgaagcagcgaatcaacagccagtccaagatgagcgcggacgggctgcga
ggcgccggcccgtcggggatcgcctccatcgtcacgggagcagcgggagcagccaacgtg
atgcccgtctccggttcggggctccaggtcatcgactcccctctgctgactcagcagatc
gaagcgcagagactctgcatcaagcacctgaagaacgacaacaaccgaatgaaggctgag
aagatgcgcgctcagctggcctctcttcctcctctgcacgtgaccaagcttccctgcaga
gaaggaggtcgccccgaggtgctctccagcgccctctaccgcaagaccgaccagctgctg
gagacgctgctgcagatgagcgccaacgtcaaggtggtggacatcactggcaaatctcct
gtgacccccggcgctcagctgctggagcagacggcccggttacagtccctcagtgacacg
ctgggtcggctgaaggacgaagtcgccgagcacgtcgtccaccagcaggccggagcgcga
gcctcgtccgatttcgccacgtttccgtcgacctcgtttgtgaaggccaaggaggagaag
cagggcgacgcggtgctggtgggccgcgtcatggtgccgtgtcacagcggccaggagcag
gtgcatcgcctcgttctgtcccagtcgcagctgcaccgagtccacagtctgctgcagacc
taa
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integrated database retrieval system
