Pungitius pungitius (ninespine stickleback): 119227310
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Entry
119227310 CDS
T07626
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119227310 (arid4a)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119227310 (arid4a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
ARID
119227310 (arid4a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
119227310 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
PWWP
Motif
Other DBs
NCBI-GeneID:
119227310
NCBI-ProteinID:
XP_037341895
LinkDB
All DBs
Position
14:346705..356620
Genome browser
AA seq
1388 aa
AA seq
DB search
MKAADEPPYLTVGTDVSAKYRGAFCEAKIKTVKRMVKVKVNLKGESTTQVVQDDQVKGAL
RVGSTVEVKTNEGLSSEAVISKLTDASLYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKSNRGGRRSSQAVAEEEHESSSSDDEEDDRRRLNDELLGKIC
SVESEEEASRWYLALVVSPSCNEELQVKKDQCLVRAFSDSKFYTVARRHVHTFISTRSEF
SNRRGFEAAQMFLRTGEVPEMWKMDMSQILDSSSSDDEEKESEEDEEVEEEEEEEEEEEE
KKKKRMKEEPEEEEPDPEERDRFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYR
LGGCHKIESGTVWKQVYVDLGIPVLNSAASYNVKTAYKKYLYGFEEYCRSATITFRTIHH
NNPRPPTTPANQKQAGAELSQPPALPEKVDPVKDPSEEEAECENEEVKDRPSSPKGRRRC
VSSPLTAQRGSPSTPDKGGEDNSEEQREVRRRSNRRMDDSDKGSEEEEEEGDDDDDDEVD
EEEEEEEEEDDDDDDEEDDDDDERRMTRDGCEEEEEEEGDSVTGTKVRVKYGRGKTQKIY
EAHIKKTDLDNGEQFYLVHYYGWNVRYDEWVKADRLIWPLEKGTKKRRRKKVKNKDEPET
ERDEDKAASAALKPPGAKRGRPQTGTPPGGSAGRGASKTASSEGRPNGRSSRTETPSNMA
NGDNTPRRRTRRTSGLYDVDRASNEDSGNSSEDSQSEDPPDKKPLARQGGAEGPSCEEGE
GKGEELSEVADVKTATNNTFATATAGQTPVAGALQHPIMPQEKTDKILSQLKEEAEQREE
PTVEAAMMLVHLDQEMSSVRDTDHLLPAQQVLNKMSSSHAISSPPDTIRAFPEEHVSSPQ
PVPEEEKKEEEEEDSRSTPLSSPRVKGRRALRETGPETPPRMLFSACPAHMASPPCSDLK
RQDEPMVVLHCLPSQRLLPESPNADSDTDSATEEEEEEILEKRSISTLKRKAAEQGETDK
KLRPERRQLEAPCPETPPVPPKMAFGASPQALPSPLHRAESQSSEGAMKADDCPRPEDTA
KEASEELLMGGASKESEVVPATPAPDSSPTEELELQIGPEALVCHEVDLDDPDEKEKPTA
PEHLLLMMREQQLAPPPKLIHAAALPSPHLPEPQPMPFLPEPAPGSAPGPEELHPARSPG
EEQRGALQGDSGFDGSASTFVMSLQESKDRGQKRVMDCNLSPMAKKQKRNQKRLCTPGKV
EKNGAGNSSDSEDHPRLSQKSCVSSPSSHSKDKHTFSPQRAYKWTFQLDELDNMSSTERI
SFLQEKLQEIRKYYMTLKSEVASIDRRRKRLKKKEREVSHTTSSGSSDTGMSPSSASPAQ
NTVAVECR
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcagacgagcccccctacctgaccgtggggacggacgtcagtgccaaatac
agaggagccttctgtgaggccaagatcaagacggtgaagcgcatggtgaaggtgaaggtg
aacctgaaaggcgaaagtacgactcaggtggtccaggacgaccaggtgaaaggagctctg
agggtgggctccacggtggaggtgaagactaacgagggtttgtccagcgaggccgtcatc
agtaagctgaccgatgccagcctctacactgtggtgtttgatgacggagacgagaagact
cttcggaggacgtccctgtgtctgaagggagagagacactttgcagagagtgagactttg
gaccagctgcctctcactaacccagaacattttggtactccggtcatcggcaagaagtca
aaccgaggaggacgtcgctcgtctcaggctgtggctgaggaggagcatgagtcctcctcc
agtgacgacgaggaggacgacaggagaagactcaatgatgagcttctgggaaaaatctgc
agcgttgagagtgaagaggaagcgagtcgctggtacctggctctggtggtgtctccaagc
tgtaacgaggagctgcaggtgaagaaggaccagtgtctggtcagagccttcagcgactcc
aaattctacacggtggcaaggagacatgtccacaccttcatctccaccaggtctgagttc
tccaacaggagagggtttgaggcggcccagatgttcctgaggacaggtgaggtccctgag
atgtggaaaatggacatgagtcagattctggactcgtcctccagcgatgatgaagagaag
gagagcgaggaggatgaagaggtggaggaggaggaggaagaagaagaagaggaggaggag
aagaagaagaaacgcatgaaggaggagccggaggaggaggagcccgatccagaggagaga
gaccgcttcctgcagcagctctataagttcatggaggaccgagggacccccatcaacaag
cctccggtgttgggttataaagacctgaacctcttcaagcttttcagactggtctatcgg
ctgggaggctgccacaagatagagtccggtactgtgtggaagcaggtctacgtggatctg
gggatccccgtcctgaactctgctgcctcctacaacgtcaagacggcctacaagaagtat
ctgtatggctttgaggagtactgccgctctgccaccatcaccttcagaaccatccatcac
aacaacccccgccctcctaccacaccggccaaccagaagcaggcaggggcggagcttagc
cagccccccgcgctgccagagaaggtggaccctgtcaaagacccgtcggaggaggaggcg
gagtgtgagaacgaggaggtgaaagatagaccgtcgtccccaaaggggaggaggaggtgt
gtgagcagtccgctgacagcacagaggggttctccctccacaccagacaaaggaggagaa
gataacagtgaggagcagagggaggtgaggagacgcagcaacagacgaatggacgactcc
gataaagggtcggaggaggaggaggaggagggcgatgatgatgatgatgatgaagtggac
gaggaggaggaggaggaggaggaggaggatgatgatgatgatgatgaagaggatgacgac
gacgacgaaagaagaatgacgagagacggctgtgaggaggaggaggaggaggagggagac
tctgtgacggggacgaaggtgcgggtgaagtacggcagagggaagactcagaagatctac
gaggctcacatcaagaagacggacttggacaacggagagcagttctacctggtccactac
tacggctggaacgtcaggtacgacgagtgggtgaaagccgaccgcctcatctggcctctg
gagaaaggaaccaagaagaggcgcaggaagaaggttaagaacaaagacgagccggagaca
gaaagggacgaagacaaggctgcgtcagccgcgttgaagcctccgggagcaaagcgagga
cgaccccagaccggcacgccacctggtggctcagcaggacgcggcgcctcaaagacggcg
agcagcgaggggcggcccaacggccggagcagccgcacggagacgccgtccaacatggcc
aacggagacaacactcctcgcaggaggaccaggaggacgtcgggtttgtacgacgtggac
cgcgcgtcgaacgaggattctgggaactcgtcagaggacagccaatcagaagacccgcct
gacaaaaagccgttggcacggcaagggggggctgaaggcccgtcctgtgaagagggggag
gggaagggggaggagctaagtgaggttgctgacgttaagacggccaccaacaacactttc
gccacggcaacagctggtcagacgcctgttgccggggcgctgcagcatcccatcatgcct
caggagaaaactgacaaaatcctgagccaattgaaggaggaggcggaacaaagggaggag
ccaacagtagaagctgccatgatgctggttcacctggaccaggagatgtcgtctgtccga
gacactgaccacttgctccctgcacagcaggtgcttaacaagatgtcttcttctcacgcc
atctcgtctcctccagataccatcagggcgtttcctgaagagcatgtgtcctctcctcag
cctgtcccagaggaggagaagaaggaggaggaggaggaggacagcaggtccactcctctg
tcctctcccagagtcaaaggtcgcagggccctcagggagacagggcctgaaactcctccc
agaatgctctttagcgcctgccctgcccacatggcgtctcctccttgtagcgacctcaag
agacaggacgagcccatggtggttctccactgccttccctcccagcgcctcctccccgag
tctcccaacgcagattccgacactgactccgccaccgaggaggaggaggaggagattctt
gagaagaggagcatctccacattaaaacgaaaggccgcagagcagggagaaactgacaag
aagctccgccctgaaaggagacagctggaggccccctgtcccgaaacgcctcccgtccct
ccaaagatggccttcggagcctcgccccaagcgctcccctctcctctccacagggcggag
tcacagagcagtgaaggagcgatgaaggcggacgactgtccccgtccagaggacacggcg
aaggaggcgtcagaagagctgctgatgggcggagcctcaaaagagtcagaggtggttcct
gcgacgcctgccccagactcctcccccactgaggagctggagttgcagatcggtcctgag
gcgctggtctgccatgaggtggacctggacgacccggacgagaaggagaagcccactgcc
ccggagcacctcctcctgatgatgagggagcagcaactcgccccgccccctaaactcatc
catgctgctgcgctgccctccccccacctccctgaacctcagcccatgcccttcctgcct
gaacctgcacccggctctgctcctggtcccgaggagctccacccagcaaggagccctggt
gaggagcagagaggagcactgcagggcgactccgggtttgatggcagcgcctccaccttc
gtgatgtctctgcaggagagtaaagacagaggtcagaagcgggtgatggactgcaacttg
agcccaatggccaagaaacagaaacgcaaccagaagagactctgcacacctgggaaggtg
gagaagaacggggcaggtaacagcagtgacagtgaggaccacccccgtctgtcccagaag
tcttgtgtttcgtctccttcgtctcacagcaaagacaaacacaccttctccccccagagg
gcctataagtggaccttccagctcgacgagctggacaacatgtccagcacagagaggatc
tccttcctgcaggagaagctgcaggagatcaggaagtactacatgacccttaagtcggag
gtggcctccatcgacaggcggagaaagagactaaagaaaaaggagagagaagtgtcccac
accacgtcctccggctcctcggacaccggcatgagtccgtcctctgcgtcgcccgctcag
aacaccgtggctgtggagtgcaggtga
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