Pungitius pungitius (ninespine stickleback): 119227316
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Entry
119227316 CDS
T07626
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
ppug04140
Autophagy - animal
ppug04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119227316 (hif1aa)
04137 Mitophagy - animal
119227316 (hif1aa)
04148 Efferocytosis
119227316 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119227316 (hif1aa)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119227316 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
119227316
NCBI-ProteinID:
XP_037341905
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Position
14:7126584..7137449
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AA seq
756 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSVSSSLDKASIMR
LIISYLCMRKLLNTDEPLTEEETELESQLNSAYLKALDGFLLVLSEDGDMIYLSENVNKC
LGMAQFDLTGHSVFDFIHPCDQEELREMLVHKTGSKKAKEADMKRSFFLRMKCTLTNRGR
TVNVKSATWKVLHCSGHVRVYDSPTEETPNGHKEPPVPYLVLICDPIQHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLNKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSMDQIEDV
KPVKEELQQQAEKEVVESSQPNLPQSPLKDEEKSPERDVIQLFTQAAEVETPSSLYDQLK
AEPEALTLLAPAAGDAVISLDFSCPESEILLVKEVPLYNDVMLPSTGDQLTPPLSPLPLS
ETLRVTTTVSEDAKAKSYSPARSTSSAIHSTSKADSPLDFCYPMDSEMSSDFKLDLVEKL
FAIDTETKTPFTTQAMEDLDLEMLAPYIPMDDDFQLRSLTPEESLSCGSVKSLQGSPVHV
PQDIHSYPSSPFSAPGSRTASPAPLLAPHPATTTAKRIPQPDKDVSLMTLAAANSQRKRK
LGDAIQTIGQKTLPPQQVEQGKKLKASLSETTRTILLLPSDLASRLLGSTSDGTSSPFTL
PQLTSYDCEVNAPLQGRQSLLQGEELLCALDLVNAI
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtaccagaaaagaaaagggtgagctcggagcggagaaaggagaag
tcgagggatgcagcgcgatgccggcgtggaaaggagtcggaggtgttctacgagctggca
cagcagctgcccctgccccacagcgtcagctccagcctggacaaggcctcgataatgagg
ctcatcatcagctacctgtgcatgagaaaactgctcaacaccgatgagccgttgacagag
gaggaaacagagctggagtcacagctaaacagcgcctacctaaaggccttggacggcttt
cttttggtcctgtcggaagatggagatatgatctatctctccgagaatgttaacaagtgc
ctcgggatggcacagtttgacctgactggacacagtgtgtttgacttcatacatccgtgt
gatcaggaagagctgagggagatgctggtccacaaaaccggctccaaaaaggccaaggaa
gcagacatgaagcgcagcttcttcctgcgaatgaaatgcactctcaccaacaggggccgc
acggtcaacgtcaaatcagctacatggaaggtgctccactgctcaggtcatgtgcgtgtg
tacgacagccccaccgaggagacccccaacgggcacaaggagcccccggtcccctacctg
gttctgatctgtgatcccatccaacatccatccaacattgaggtccctcttgacaccaag
acttttctcagccgccatacgatggacatgaagttcacgtactgcgatgaaaggatcact
gagctcatgggatatgatccagaggacctgttgaatcgctctgtgtacgagtactatcat
gctctggactcagaccatcttaacaagactcaccacaacctgtttgcaaagggccaagtc
agcacaggccagtaccggatgttggccaagagaggaggatttgtgtgggtggaaactcaa
gccactgtcatctacaacaacaagaactcccagccacagtgtgttgtctgtgtcaacttt
gtgctcagtggcatccaggaggagaaactgatattgtccatggatcaaatcgaggatgtg
aagccagtgaaggaggagctgcagcagcaggcagaaaaggaagttgtagagagcagccag
cccaacttgcctcagtccccgctaaaggacgaggagaagagcccggagcgggatgtgatc
caactgttcacgcaggcagcagaggtcgagactccgtccagcctctatgaccagcttaag
gcggagccggaggccctcactctgctggccccagctgctggagacgcagtcatctccctg
gacttcagttgccccgagtccgagatcctgttggtgaaggaggtccctctatacaatgat
gtaatgcttccctccaccggtgaccagctgactcctcctctctcccctctgccgctgagc
gagactctccgtgtcaccaccaccgtctctgaggatgctaaagctaagagctactctcca
gcccgctccacctcgtcggccatccacagcacctcaaaggccgacagtccactggacttt
tgttaccccatggactccgagatgagctcagatttcaaactagacttggtggagaagctg
tttgctattgatacagagaccaagacccccttcaccacacaggcaatggaagacttggat
ctggagatgttagctccctacatccccatggatgatgactttcagctgcgcagtctgacc
ccagaagagtctttgtcttgtggatcagtcaaatccctgcagggttctccagtccacgtg
ccacaggacatccacagctatcccagctccccattcagtgcaccaggtagccgcacagct
tccccagcaccacttctagcccctcatccggccaccaccactgcaaagaggatcccgcag
ccggacaaagacgtctcgctcatgaccctggcagctgcaaattcccaacgcaaaagaaag
ctgggtgatgcaatacagactattggacagaagacgttgcctccgcaacaggtggagcag
ggcaaaaagctgaaggcctcattgtcagaaacgaccaggaccatacttctgctgccgtca
gatttggcgagtcgtcttctgggaagcacatcagacggcaccagttcccctttcaccctg
ccacagctcaccagctacgactgcgaggtcaacgcccccctgcagggtcgtcagtccctg
ctgcagggagaggagctgctgtgcgctctggacctcgtcaacgcgatatag
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