Pungitius pungitius (ninespine stickleback): 119227334
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Entry
119227334 CDS
T07626
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119227334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227334
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119227334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
UPF0242
Motif
Other DBs
NCBI-GeneID:
119227334
NCBI-ProteinID:
XP_037341946
LinkDB
All DBs
Position
14:2461938..2495251
Genome browser
AA seq
1292 aa
AA seq
DB search
MSSLTVEEDQKWFPTHVQVTVLRGRGVRGKGKHGTSDVYTIIQLGREKYSTCVAEKTTEP
EWREECSFELQPGVLETGCPAASNELVLVAMHRAPMALDVFLGQAVIQLDKVFHQSRCVR
NEWYKLNSKTGKKEKERGDIQVTVQFTRNNLTASMYDLVMKDKGASTFGKLKERIKGKRR
SSEEDSAPAALPSGYGSLVRMRQRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRGKLRKS
ADTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPDHTKSSSL
VCEFGDEDGDQIAIAVPRPAACVNGRLPSGLAPLQKSLPLSVSLQNLRPPADLLRSPAGD
GRRWSFDKPCEEEKAAIAAALEQSGPMLGDEEEEEEEEEEEERGGKLAPPGSASSSSSRV
ESESRGKKPRRDLLNQAGEQKHKGWFGSKDSHGKPSLVVSPKLEPGTDPHPPPTPRPPGA
LVDPAPLVSPLHHTNPFSHSRAAAPPLSPRNPFFSLLQHNPFYGDMLTARPLKPALPPPL
PPLPRLSSARPPIAQLFPQAGNPAAGSAAMGEAGERPFEGEKPPGPGDSEWDDCFEAFAA
GRLQSPEGPPAAGRNEDEPLPATDEDEDEAPLRLRPFAGAAPDAQKAGFQVTGAYPSDTF
SQFLETIPELDSFESDNAPSGNSPAARRQTNQADHATNGPNPANVHQAASHPPFVKPSSG
SPDPGSSGIGSSGAEEDFLSCRSSLSDKFSASSSEEAEARSVEGGALRLQRPSDPPSAAR
PSESEDDAADAVLQRGAGGDPRGLEGPSAPQTPPLASRPHEVSATVGALTPSPNLFGAEW
LPEPQQKSKEPSAGFNGFAQDFAAGLFDTFAPLGDPTSAMTSTPPDNALAYPSLRVVTSS
PEASRPSPNPFSFLGDILDAANIASGLDGALLPPPMSDRSSGVFLQSLSASTDSQDYQTC
ESHQTSKSSSGPEPNATLSAASAASAALGPEGAADALRPRDEGVDGWDRSAVEGAATLEP
GVVTPEAFGFPPAEGGVGSGRGVSVGASRPHGAPLNRSLSEGSLAPAFDELLPPPPSLGS
DPGAVHEPPSAQPGPRLPSPTSSAPCLTPQSRSSPVALFSLPPVASAAARPPPSTPPRPV
LEGAATLPTRQQQAANQENSPHAVKPLTAEERRAEGRSVLEKLKSSIHPGRSSSSSQPSE
QEADRKKLVTEGAGSYYHLNHRDLVAMLVQRDAELERQRAEFERQKVVLAKREVELRKLK
PQVKDLEDYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtagaggaggaccagaaatggttccccacgcacgtccaggtgacg
gtgctgcggggcaggggcgtgcgaggcaagggcaagcacggcaccagcgacgtgtacacc
atcatccagctgggcagggagaagtactccacctgcgtggcggagaagaccacggagccg
gagtggcgggaggagtgctccttcgagctgcagcccggcgtgctggagaccggctgcccg
gccgcgagcaacgagctggtcctcgtcgcgatgcaccgcgcgccgatggccctggacgtg
ttcctgggacaggcggtgatccagctggacaaggtcttccaccagagccgatgcgtgaga
aacgagtggtacaaactcaactccaagacggggaagaaggagaaggagcgcggcgacatc
caagtcacggtccagttcacccgcaacaacctgacggccagcatgtacgacctggtcatg
aaggacaagggcgcctccaccttcggcaagctgaaggagcgcatcaagggcaagaggagg
agcagcgaggaggactcggcgccggccgccctgcccagcggctacggctccctcgtccgg
atgcggcagcggttgccgagcgacggcggcggggaggaggactacgaggacgacgagggg
ggcgaggcgcggcggagcaagatgaggaccttcttcctgagggggaagctgaggaagtcg
gcggacacccgctccagcacgtcgctgggctcggagagcagcgagtcgtcgtcgcgcggc
ggcagcctgagccccaccgccggcatcagcgtggtggtctccgacctctccaactcgccc
agcaacagcagcaacctgacggcggacaacagcccagatcacaccaagtcgtcctctctc
gtgtgcgagttcggcgacgaggacggggaccagatcgccatcgcggtgccccggcccgcc
gcctgcgtcaacggccgcctcccctcgggcctggcgccgctgcagaagtctctgcccctc
tccgtgtctctgcagaacctccggccccccgcggacctcctcaggagccccgcgggggac
gggcgccgctggtccttcgacaagccctgcgaggaggagaaggcggccatagcggcggcc
ctggagcagagcgggcccatgctgggtgacgaagaggaggaagaggaggaggaggaggag
gaggagaggggggggaagcttgctccgcccggatccgcctcctcctcctcctccagggtg
gagtcagagagccgggggaagaagccgaggagggacttgttaaaccaggctggcgagcag
aaacacaaagggtggtttgggtcgaaggactcgcacggaaaacccagcctggtggtgtca
cccaaactagagcccggcactgacccccacccgccacccactccccggcccccgggtgcc
ctcgtagaccccgcccctctggtttcccccctccatcacactaaccctttctcccactca
cgggccgcggcgccccccttatccccccgcaaccccttcttctctctcctccagcacaac
cctttctatggcgacatgctaaccgctcggccgctaaagcccgcgctgcctcctcctctg
cctcctctgccccgtctctccagcgcccggccccccatagcgcaactcttcccgcaggcg
ggcaacccggccgcagggagcgccgcgatgggcgaagccggagaacgccccttcgaaggg
gagaagccgcccggccccggggactcggagtgggacgactgcttcgaggcctttgcggcc
ggcaggctgcagtctcccgagggtccgcccgccgcgggccggaacgaagacgagccgcta
cccgcgacggacgaggacgaagacgaagcgccactacgcctccgacccttcgcgggggcg
gcgcccgatgcgcaaaaagccgggttccaggtcaccggggcgtatccttctgacacgttt
tcacaattcctcgagacgatcccggagctcgacagctttgagagcgacaacgcgccgtcg
ggtaactcgccagccgctcgccgccagactaatcaagctgaccacgccactaacggtcct
aaccccgctaatgtgcatcaggccgcctctcacccccccttcgtgaagcccagcagcggc
tccccggatcccggctcctcgggtatcggcagttcaggagccgaagaggacttcctctcc
tgccgctcgtcgctttcagacaaattctccgcgtcctcctccgaggaagccgaggcgcgg
agcgtcgaaggcggcgccctccgcctccagcggccttccgatccgccgtcggccgcgagg
ccctcggaatcggaggatgacgcagccgacgcggtcctccagcgcggcgccgggggcgat
ccccgcggtttggagggcccatcggcgccgcagaccccgccgctcgcgtcccggccgcac
gaggtcagcgccactgttggcgctttgacgccctcgccaaacctcttcggcgccgagtgg
ctgccggagccgcagcagaaatccaaagaaccatcagctgggttcaacggatttgctcag
gatttcgccgccggactcttcgatacctttgcgccgctcggcgaccccacgagcgcgatg
acttccacgcctccagataacgcactcgcatacccctcactacgtgtcgtaacctcctcg
cccgaggcgagccggccctccccgaacccgttcagctttttaggcgacatcctcgacgcc
gctaacatcgcgagcggcctcgacggcgcccttctgcccccgccgatgtccgatcggagc
agcggcgtctttctgcaaagcctttcagccagcacggactcgcaggactaccaaacctgc
gagtcccaccagacctccaagtcctccagcggcccggagcccaacgcgacgctcagcgcg
gcctccgctgccagcgccgctttgggcccagaaggcgccgccgacgcgcttcgcccgcgc
gacgaaggagtcgatggatgggatcgatccgcggtggaaggggcggcgactctcgagccg
ggtgtcgtgacgccggaggcctttggtttcccccccgccgagggaggtgtgggaagtggg
cgcggcgtctccgtcggcgcgtcccggccacacggcgctccgctgaaccgctccctctcc
gaaggctcgctcgcgcccgcttttgacgaactcctcccgccgccgccgtccctcgggagc
gaccccggcgcggtgcacgagcccccctccgctcagcccggcccccgcctcccctctccg
acctcctctgctccctgtctaactcctcaaagccgcagctcccctgtcgcgctcttttcc
ctccctcctgtcgccagcgccgccgcgaggccgccgcccagcacgccgccaaggccagta
cttgagggggcggcgacactgccgactcggcagcagcaggcagccaatcaggagaacagc
ccccacgcggtgaagcccctgaccgccgaggagaggcgggctgaaggccgctcggtgctg
gagaagctgaagtccagcatccacccggggaggagcagcagcagcagccagccgagcgag
caggaggcggacaggaagaagctcgtgacggagggagcgggctcctactaccacctgaac
caccgggatctggtcgccatgctggtgcagcgggacgcggagctggagcggcagagggcg
gagttcgagcggcagaaggtggtgctggcgaagcgggaggtggagctgaggaagctgaag
ccgcaggtcaaagacctggaggactacatcgacacgctgctggtgcgcatcatggagcag
aagcccaccctcctgcaagtgcgctccaagttgaagtga
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