Pungitius pungitius (ninespine stickleback): 119227347
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Entry
119227347 CDS
T07626
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04517
IgSF CAM signaling
ppug04520
Adherens junction
ppug04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119227347
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119227347
04530 Tight junction
119227347
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Paralog
GFIT
Motif
Pfam:
AFDN
DIL
PDZ
RA
PDZ_2
PDZ_6
RA_3
Motif
Other DBs
NCBI-GeneID:
119227347
NCBI-ProteinID:
XP_037341966
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All DBs
Position
14:12856625..12865566
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AA seq
1186 aa
AA seq
DB search
MPEEAEREKLAKVIRQWNNNRLDLFEISQPDENLEFHGVMRFCFEDRVGGNVATKCLRVC
SNSSTQEVIDTLSEKFRPDMKMLTNSYSLYEIHANKERKLDLDKRPLVVQLNWTTDNREG
RFVLKKVNESLKVPLKQIIQPENCHEKEKGGVIQSFKRTLSRKDKKKEKNKTKATDTFSD
DENRSTEKLPNNKSNNNEGKESCTENPQLLWPDAVEGKHTDNIYRDSSDQPGLPIGIQFS
DSSEGAFLSAVINYTNSSTVHFKLSPAYILYAVTRFALQRHDRRGTALCGHGVTLTTSKM
LAMTSKVIERQQAIAGALAFWMANSSELLNFLKHDQDLSVFTQQSQLDLSHLVHKAYSCL
LLCLQNDLRKHLPTFLIDPEQHGALPAGIEMVLNTLMNAMSLLRRCRVNPALTIQLFSQL
FHFVSVWLFNQLMSPEANTPGLRSHYWGAALRQRLAAIEAWAERQGLELAADCHLGHILQ
ATMLLTMNKYSMQDVKAIQNTCFKLNSLQLQTLLSGYLYATNEPHIPTDLIDAVVTAAKV
SADKLIRSEGRDIQLEESLDLHLPFLLPEGGYSCDTVRGIPLGLREFLEPICRKGLCSLT
SQPNSTGDWTVYFSEPTSSAQSTCLAAHREPDIVSITLNKPLNSGMGVSIVAAKGVGQEN
TGIYIKSIVKGGPAEMNGTLTAGDQLLSVDGRSVIGLSQERAAAIMMQTGPVVTLQVAKF
GASFHGLGALLSDPTPDRTTGLVLKRVDPGPSDRFNGGSKRTTDQIMQRNRQLYRSNPNM
SVCFPPEDGDDPVDPVVRANNMAAVSNLHLCSDTVHREYLTLPTPKSQEKNVSETSRPQQ
TLKVSLRPLHGQYSSKRTFMRQALSQENLCVDSGGPLLDRRQHFGEPKEQQKQTMSHFSS
FPIRTSVSSHDILSDYCSPTKQQQGGRTSGAGVWRTPFSQHPTPTPSNQPTRIDIPVTRA
MDPHTSPPLTTFQSSALQAAKTSQPLKAHGVKIRADHIYACPISATRRLPQPAPPSQQQR
CTPHRDAAAKPQVSITPTKHVSFQEALTEQKQCTGPAKPKDPPDRCDPWRRDAQEKLEKQ
QRLRMVELLEQEVQDLQGKARRTAEENGRLRRIHLEWQFQKRLQEVQQRGEDEEEDEEDE
ELDMMVTIQQLEKRAQNNRSSSGNLNNELEEFEMPAETKAKLGKSL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggaggcagaacgggagaaattagccaaagtcatcagacagtggaacaacaac
agattggatttgtttgaaataagtcaacctgatgagaacctggagtttcatggagtgatg
cgcttctgctttgaggatcgtgttggaggaaatgtggccactaagtgtctgcgtgtctgc
agcaactcttcgactcaagaggtcattgacactctgtcagagaagttcaggcctgacatg
aagatgctgacaaatagttattccctgtatgagatccacgctaataaagaacgtaaactg
gatctggacaagaggccactggttgtacagttgaactggaccacagacaacagagaagga
cgttttgtgctcaagaaggtcaacgagagtttgaaggtaccacttaaacaaataattcag
cctgaaaactgtcacgagaaggaaaagggaggtgtgatccaaagcttcaagcggacactc
tcaagaaaagacaaaaagaaagaaaagaacaaaaccaaagcaactgacacgttttcagat
gatgagaatcggtcaactgaaaagctcccgaacaacaagagcaataacaatgagggaaaa
gagagctgcacagaaaacccacagcttctttggccagatgccgtagagggaaagcacaca
gacaatatttatcgggattcttcagaccaacctggattgccaattggaattcagttcagc
gatagctccgaaggagccttcctgtctgcagtcatcaattacaccaacagctccacagtt
cattttaagctctccccggcatacatcctctacgccgtgacacgcttcgctctgcagcgc
catgacaggcgtggcacagcactctgcggccacggcgtcactttgacaacaagtaaaatg
ttggccatgacatcaaaggtcatcgagaggcagcaggccatagccggcgccctcgccttc
tggatggccaactcctccgagctgctcaacttcctcaagcatgaccaagacctcagcgtg
ttcacccagcaaagtcagctggacctgtcccacctggtgcacaaagcgtacagttgcctc
ctcctctgtcttcagaatgacttgaggaaacacctgcccacgtttttgattgatcccgag
cagcatggagccctgccagctggcatagaaatggtgctgaacaccctgatgaacgccatg
tccctcttacgccgctgccgggtcaaccccgccttaaccatccagctcttctcccagctc
ttccactttgtcagtgtctggctcttcaaccagctcatgagcccagaggccaacactccg
ggcctgcgctcccactactggggagctgctctccgccagaggctcgcggccatcgaagcc
tgggcggagaggcagggcctggagctggccgccgactgccacctcggacacatcctccag
gcaaccatgctcttgaccatgaacaagtactcaatgcaagacgtgaaggccatccagaat
acctgtttcaagttgaactcactgcagctgcagacgttgctatccggctacctctatgca
accaatgaacctcacattccaactgatttgattgatgccgtagtgacggctgcgaaggtc
tcggctgataaactgattcggagcgaagggcgggacatccagctggaagagagcctcgac
ctccatctgcccttcctcctgccggagggaggatactcctgtgacaccgtgagaggaatc
ccgctggggctcagggaatttttggagccaatttgccggaaaggtctctgctctctgaca
tcccagccaaactctacaggtgactggaccgtgtacttcagtgaaccaacttcctctgca
cagagcacatgtttggcagcacacagagagccagacattgtgagcatcacactgaacaag
cctctgaacagtgggatgggggttagcattgtggctgccaagggagtcggccaagaaaac
actgggatttatatcaaatccattgtcaagggaggaccagctgagatgaacggcacgtta
acagctggggaccagctgctgagtgtggatggtcgaagcgtgatcggcctcagccaagaa
agggcagcagctatcatgatgcagacgggccccgttgtgaccttacaggttgcaaagttt
ggagcgagcttccacggcctgggagctctactgagcgacccgacgccagacaggacgaca
ggactcgtgctaaagcgagttgatcctggtccgtcagatcggttcaatggaggcagcaaa
aggacgacggaccagataatgcagagaaacagacaactgtatcgctccaaccccaacatg
agcgtgtgttttccccccgaggatggagatgaccccgttgaccctgttgtcagagcgaac
aacatggctgctgtctccaacctccacctttgttctgatacagttcacagggaatacttg
acacttccgacccctaaatcccaggaaaagaacgtgtctgaaaccagtcgaccacagcaa
acattgaaggtgtctttgaggcctttacacggacagtactccagcaagaggacctttatg
cgccaagctctgtcccaggagaacttgtgtgtggacagtggaggccccctgctggacaga
cggcagcactttggggagccgaaggagcagcagaagcaaaccatgagccacttctcatct
ttcccgattcgcacaagcgtttcttctcacgacatcctctcagattattgttctcccacg
aaacagcagcagggcggccgcacaagtggcgccggtgtgtggagaactcctttctcacaa
catccaacaccgacgccttccaaccagccgacacgcatcgacatccctgtgaccagagcg
atggacccgcacacaagtcccccgctcaccaccttccagagttcagctctgcaggcggcc
aaaacgagccaaccccttaaagcccacggggtgaaaatcagagcggatcatatctatgcg
tgtcccatctctgcaaccaggaggctgcctcaacccgcgccgccctcacagcagcagaga
tgcacccctcacagggatgcagctgcaaagccccaagtgagcatcactccgactaaacat
gtctccttccaagaagctctcactgagcagaagcagtgcacgggtcctgcgaagcccaaa
gacccaccggaccggtgcgacccgtggaggagggacgctcaggagaagctggagaagcag
cagaggctgcggatggtggagctcctggagcaggaggtgcaagacctgcagggcaaagcg
aggcgcacggccgaggaaaacggccgactgcgaaggatccacctggagtggcagtttcag
aagaggctgcaggaggtacagcagagaggagaagatgaggaggaagatgaggaagatgag
gaattggacatgatggtaaccatacagcagctggagaaaagagcacagaataatagaagc
tcttctggaaacctcaacaatgaattggaagagtttgaaatgccggcagagacaaaagca
aagctaggtaaaagtttgtag
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integrated database retrieval system
