Pungitius pungitius (ninespine stickleback): 119227369
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Entry
119227369 CDS
T07626
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119227369
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119227369
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
119227369
NCBI-ProteinID:
XP_062413272
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All DBs
Position
14:544220..556748
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AA seq
1125 aa
AA seq
DB search
MNQAEDPEDSVPPSEAPLWGGHDRQTKAQRTHQGPEPGPGPSCVSMKSNWSMDRPIVFKD
VRPSADASSHQQRRKSPEPRCVSLKNDRSIDHLIDFKDDQSNGRWIDFKDGRRSYDPQED
QESSEVPTESAQQHQTHLDSIFMLLEENILTFVKNELKKIQKILSSDYPECLEKEDEEVL
DEEQRRSREGFVKISMHFLRRMKLEELAERLQSRLSAAVCQRELKSNLKKKFQSVFEGIA
KAGNPTLLNEIYTELYITEGGTAEVNEEHEVRQIETASRRPARPETTIRQEDLLKASAGG
EEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKDLQDIQFTFPFSFRELNVLREKKFSLVG
LVHHFFSETRAAGICRFEEFQVVFILDGLDECRLPLNFHNNKILTDVTETSSVDVLLTNL
IRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQATRII
SHIKTSRSLHIMCHIPVFCWITAGVLDEVLKTREEGELPKTLTEMYIHFLVVQSKVKKVK
YDGGAETDPHWSPESRKMIESLGKLAFDQLQKGHLIFYESDLTECGIDIRAASVCSGVFT
QIFREERGLYQDKVFCFVHLSVQEFLAALHVHLTFTRSGVNLLSEEQTTSLWSKVFSGKL
KRMRLYQSAVDQAFQSPNGHLDLFLRFLLGLSLETNQSLLRGLMTHTGSHSQTNEGTVEY
IKKKISENVSPEKSINLFHCLNELNDDSLVEEIQRFLRSGRLSSDKLSPAQWSALVFILL
SSEDLEVFDLKKYSASEEALLRLLPVVKASNKVLLSGCNLSERSCEVLSSVLSSQSSSLR
ELDLSNNDLQDSGVKLLCDGLKSPHCDLETLSLSGCLITEEGCASLVSALRSNPSHLREL
DLSYNHPGDSGVKLLSDGLKDPHWRLETLRVEPAGVRWMTPGLRKYSCELTIDTNTVNRE
LKLSDNNRKVTLVKEVQSYPDHPDRFDSYPQLLCRTGLTGRCYWEVEWRGKVDVSVSYKG
IMRKGNSRDCLFGYNHQSWSLMCSYVGYSVRHNNTSRRIITSSSSSSSGRVAVYVDCPAG
SLSFYRVSSDSLIHLHTFSTTFTEPLYPGFGFWFRSGSSVSLCPL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggctgaggacccagaggacagtgtccctccctctgaagcccctctgtggggg
ggacatgacagacagaccaaagctcagaggacccatcagggaccagaacctggacctgga
cccagctgtgtgtccatgaagagtaactggtctatggatcgtcctatagtcttcaaagat
gtccgtccctctgctgatgcaagttcacatcagcagagaagaaagtctcctgaacccaga
tgtgtgtccttgaagaatgatcggtctattgatcatctgattgacttcaaagatgatcag
tctaatggtcgatggattgacttcaaagatggacgccgttcttatgacccacaagaggac
caggagagctcagaggttcccacagagtctgcccagcagcatcaaacccacctggactcc
atcttcatgctgctggaggagaacatcctcacctttgtgaagaacgagctgaagaagatc
cagaagattttgagttcagattacccagaatgcttagagaaggaggatgaggaggtgctg
gatgaagagcagaggaggagcagagagggatttgtgaagatctcaatgcacttcctgagg
agaatgaagctggaggagctggctgagcgtctgcagagcagactttctgctgcagtttgt
cagcgtgaactcaaatccaacctgaagaagaagttccagtctgtgtttgagggcatcgct
aaagcaggaaacccaacccttctgaatgagatctacacagagctctacatcacagaggga
gggactgcagaggtcaatgaagaacatgaggtcagacagattgaaacagcatccaggaga
ccagccagaccagaaacaaccatcagacaagaagacctcctcaaagcctcagctggagga
gaagaaccaatcagaacagtgatgactaagggagtggctgggattgggaaaacagtctta
acacagaagttcactctggactgggctgaagacaaagacctccaggacatacagttcaca
tttccattctccttcagagagctgaatgtgctgagagagaagaagttcagcttggtggga
cttgttcatcacttcttcagtgaaaccagagcagcaggaatctgcaggtttgaagagttc
caggttgtgttcatcttggacggtctggatgagtgtcgacttcctctgaacttccacaac
aataagatcctgactgatgtcacagagacctcctcagtggatgtgctcctcacaaacctc
atcagggggaagctgcttccctctgctcgcctctggataaccacacgacctgcagcagcc
aatcagatccctcctgagtgtgttggcatggtgacagaggtcagagggttcactgacccc
cagaaggaggagtacttcaggaagaggttcagagatgaggagcaggccaccaggatcatc
tctcacatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttctgctgg
atcactgctggagttctggatgaggtgttgaagaccagagaggaaggagagctgcccaag
accctgactgagatgtacatccacttcctggtggttcagtccaaagtgaagaaggtcaag
tacgatggaggagctgagacggatccacactggagtccagagagcaggaagatgatcgag
tctctgggaaaactggcctttgatcagctgcagaaaggccacctgatcttctatgaatcc
gacctgacagagtgtggcatcgatatcagagcagcctcagtgtgctcaggagtgttcact
cagatcttcagagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctg
agtgttcaggagtttctggctgctcttcatgtccatctgaccttcaccaggtctggtgtc
aatcttctgtcagaagaacaaacaacctccctgtggtctaaagtcttcagtggcaaactt
aaacgaatgcgtctctaccagagtgctgtggaccaggccttccagagtcctaatggacac
cttgacttgttcctccgcttcctcctgggtctttccctggagaccaatcagagtctccta
cgaggtctgatgacacacacaggaagtcactcacagaccaatgagggaacagtcgagtac
atcaagaagaagatcagtgagaatgtgtctccagagaaaagcatcaatctgttccactgt
ctgaatgaactgaatgatgattctctagtggaggagatccaacggttccttagatcagga
cgtctctcctcagataaactgtctcctgctcagtggtcagctctggtcttcatcttactc
tcatcagaagatctggaggtgtttgacctgaagaaatactctgcttcagaggaggctctt
ctgaggctgctgccagtggtcaaagcctccaacaaagttctactcagtggctgtaacctc
tcagagagaagctgtgaagttctgtcctcagtcctcagctcccagtcctctagtctgaga
gaactggatctgagtaacaacgacctgcaggattcaggagtgaagctgctgtgtgatgga
ctgaagagtccacactgtgacctggagactctcagcctgtcaggctgtctgatcacagag
gaaggctgtgcttctctggtctcagctctgagatccaacccctcccacctgagagagctg
gacctgagctacaaccatccaggagactcaggagtgaagctgctgtctgatggactgaag
gatcctcactggagactggagactctcagggtggagcctgctggagtccgatggatgaca
ccaggtctgaggaagtattcctgtgaactcacaatcgacacaaacacagtaaacagagaa
ctcaaactgtctgacaacaacaggaaggtgacacttgtgaaggaggttcagtcatatcct
gatcatccagacagatttgactcctatcctcagctgctgtgtagaactggtctgactggt
cgctgttactgggaggttgagtggagaggaaaagttgatgtatcagtgagttacaaagga
atcatgaggaaaggaaacagtagagactgtttgtttggatacaatcatcagtcctggagt
ctgatgtgctcttatgtaggttactctgtccgtcacaataacacatcaagacgcatcatc
acctcctcctcctcctcctcctctggtagagtagcagtgtatgtggactgtcctgctggc
tctctgtccttctacagagtctcctctgactcactgatccacctccacaccttcagcacc
acattcactgaacctctttatcctgggtttgggttctggttcaggtctggttcctcagtg
tctttgtgtcctctgtag
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