Pungitius pungitius (ninespine stickleback): 119227382
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Entry
119227382 CDS
T07626
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119227382
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119227382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_4
SPRY
LRR_8
AFG1_ATPase
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
119227382
NCBI-ProteinID:
XP_062413441
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All DBs
Position
14:1266064..1276453
Genome browser
AA seq
1106 aa
AA seq
DB search
MKSNRSKDQPLFFKDVRPTADASSHQQRRKSPEPRCVSMKSDHSIGRWIDFKDDQSMDGR
MNFKDDQSIDNFINFKDGGRSYDPQEDQEISEVPTESAQQHQTHLDSIFMLLEENILTFV
KNELKKIQKVVSSDYPECLEKEDEEVLDEAQRRSREAFVKISVHFLRRMKQEDLAERLQS
RLPAGVCQRELKSNLKKKFQSVFEGIAKAGNPTLLNEIYTELYITEGGTAEVNEEHEVRQ
IETASRRPARPETTIRLEDLLKASAGGEEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKD
HQDIQFTFPFTFRELNVLREKKFSLVGLVHHFFSETGICRFEEFQVVFIFDGLDECRLPL
DFHNNEILTDVTETSSVDVLLTNLIRGKLLPSARLWITTRPAAAYQIPPECVGMVTEVRG
FTDPQKKEYFRKRFRDEEQASRIISHINTSQSLHIMCHIPVFCWITATVLEDVLKTREEG
ELPKTLTEMYIHFLVVQSKVKKVKYDEGAETDPHWSPENRKMIESLGKLAFDQLQKGHLI
FYESDLTECGIDIRAASVYSGVFTQIFREERGLYQDKVFCFVHLSVQEFLAAFHVHLTFF
SSGVNLLSGEPGPMRLYQSAVDQALQSHNGHLDLFLRFLLGLSLETNQSLLRGLLTQTGS
TSQTNQETVQYIKEKISENVSPEKSINLFHCLNELNDGSLVKKIQWSIRSGRLSTDKLSP
AQWSALVFILLSSQEDLEVFDLKKFSASEEALLRLLPVVKASNKVLLSGCNLSERSCEVL
SSVLSSQSSSLRELDLSNNHLQDSGVKLLCDGLKSPHCDLETLRLSGCNLSERSCEVLSS
VLSSQSSSLRELDLSNNHLQDSGVKLLCDGLKSPHCDLETLRVEPAGVRWMTPGLRKYSC
ELTIDTNTVHRELKLSDNNRKVTRVKEVQSHPDHPDRFDYYRQLLCRTGLTGRCYWEVEW
RGKVCVSVSYRGIKRKGNSGGCLFGYDDQSWCLWCSDKGYSVCHNNTETRIITSSSSSSS
SSSSSSSSSSSSSHRVAVYVDCPAGSLSFYRVSSDSLIHLHTFSTTFTEPLYPGFGFWSF
GSSVSLCPLQDGETPPGGEPSSLLTT
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtaaccggtctaaggatcaacctctattcttcaaagatgtccgtcccactgct
gatgcaagttcacatcagcagagaagaaagtctcctgaacccagatgtgtgtccatgaag
agtgatcattctattggtcgatggattgacttcaaagatgatcagtctatggatggaagg
atgaacttcaaagatgatcagtctattgataatttcattaacttcaaagatggaggccgt
tcttatgacccacaagaggaccaggagatctcagaggttcccacagagtctgcccagcag
catcaaacccacctggactccatcttcatgctgctggaggagaacatcctcacctttgtg
aagaacgagctgaagaagatccagaaggttgtgagctcagattacccagaatgcttagag
aaggaggatgaggaggtgctggatgaagcgcagaggaggagcagagaggcatttgtgaag
atctcagtgcacttcctgaggagaatgaagcaggaggatctggctgagcgtctgcagagc
agacttcctgctggagtttgtcagcgtgaactcaaatccaacctgaagaagaagttccag
tctgtgtttgagggcatcgctaaagcaggaaacccaacccttctgaatgagatctacaca
gagctctacatcacagagggagggactgcagaggtcaatgaagaacatgaggtcagacag
attgaaacagcatccaggagaccagccagaccagaaacaaccattagactagaagacctc
ctcaaagcctcagctggaggagaagaaccaatcagaacagtgatgactaagggagtggct
ggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagac
caccaggacatacagttcacatttccattcaccttcagagagctgaatgtgctgagagag
aagaagttcagcttggtgggacttgttcatcacttcttcagtgaaacaggaatctgcagg
tttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctg
gacttccacaacaatgagatcctgactgatgtcacagagacctcctcagtggatgtgctc
ctcacaaacctcatcagggggaagctgctcccctctgctcgcctctggataaccacacga
cctgcagcagcctatcagatccctcctgagtgtgttggcatggtgacggaggtcagaggg
ttcactgacccccagaagaaagagtacttcaggaagaggttcagagatgaggagcaggcc
agcaggatcatctctcacatcaatacctcacaaagcctccacatcatgtgccacatccca
gtcttctgctggatcactgctacagttctggaggacgtgttgaagaccagagaggaagga
gagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtg
aagaaggtcaagtacgatgaaggagctgagacggatccacactggagtccagagaacagg
aagatgatcgagtctctgggaaaactggcctttgatcagctgcagaaaggccacctgatc
ttctatgaatccgacctgacagagtgtggcatcgatatcagagcagcctcagtgtactca
ggagtgttcactcagatcttcagagaggagagaggactgtaccaggacaaggtgttctgc
ttcgtccatctgagtgttcaggagtttctggctgcttttcatgtccatctgaccttcttc
agctctggtgtcaatctgctgtcaggagaacctggaccaatgcgtctctaccagagtgct
gtggaccaggccttacagagtcataatggacacctggacttgttcctccgcttcctcctg
ggtctttccctggagaccaatcagagtctcctacgaggtctgctgacacagacaggaagt
acctcacagaccaatcaggagacagtccagtacatcaaggagaagatcagtgagaatgtg
tctccagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatggttctcta
gtgaagaagatccaatggtccattagatcaggacgtctctccacagataaactgtctcct
gctcagtggtcagctctggtcttcatcttactgtcatcacaagaagatctggaggtgttt
gacctgaagaaattctcagcttcagaggaggctcttctgaggctgctgccagtggtcaaa
gcctccaacaaagttctactcagtggctgtaacctctcagagagaagctgtgaagttctg
tcctcagtcctcagctcccagtcctctagtctgagagaactggatctgagtaacaaccac
ctgcaggattcaggagtgaagctgctgtgtgatggactgaagagtccacactgtgacctg
gagactctcagactgagtggctgtaacctctcagagagaagctgtgaagttctgtcctca
gtcctcagctcccagtcctctagtctgagagaactggatctgagtaacaaccacctgcag
gattcaggagtgaagctgctgtgtgatggactgaagagtccacactgtgacctggagact
ctcagggtggagcctgctggagtccgatggatgacaccaggtctgaggaagtattcctgt
gaactcacaatcgacacaaacacagttcacagagaactcaaactgtctgacaacaacagg
aaggtgacacgtgtgaaggaggttcagtcacatcctgatcatccagacagatttgactac
tatcgtcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcgagtgg
agaggaaaagtttgtgtatcagtgagttacagaggaatcaagaggaaaggaaacagtgga
ggctgtttgtttggatatgatgatcagtcctggtgtctctggtgctctgataaaggttac
tctgtctgtcacaataatacagaaacacgcatcatcacctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctctcatagagtagcagtgtatgtg
gactgtcctgctggctctctgtccttctacagagtctcctctgactcactgatccacctc
cacaccttcagcaccacattcactgaacctctttatcctgggtttgggttctggtccttt
ggttcctcagtgtctttgtgtcctcttcaggacggagagactcctcctggtggagaacct
tcctctctgctcaccacatag
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