Pungitius pungitius (ninespine stickleback): 119227394
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Entry
119227394 CDS
T07626
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227394 (scfd1)
Membrane trafficking [BR:
ppug04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
119227394 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119227394 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
119227394
NCBI-ProteinID:
XP_037342045
LinkDB
All DBs
Position
14:615834..624697
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AA seq
632 aa
AA seq
DB search
MAASVREKQTVALKRMLNFNAPPLKSTATEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFIMPTEENIDRICQDLRNQLHESYFLNFISAISRSKLEDV
ASAALAANAVAQVTKVYDQYLNFITLEDDMFTLCHQNKELISYHAINRADIQDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMAAGQ
FSFQRPLFVLADRNVDMATPLHHTWTYQALIHDVLDYQLNRVVMEEGLGAEPSPAGARPK
KKNRKAYDLTAADRFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKCIMGLEGEDEG
AISMLSDNTAKLTSAMSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KLTLDKSLLDIISDPDAGTPEDKMRLFLIYYITAQQAPSEGDLDQYRTALLDAGCDLSPL
NYIKQWKAFTKMAATPANYGNSGVKPMGLFSRVMNSGSQLVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
AKVKPGKKVVYGCSELSNAAQFTKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccgtccgggagaagcagacagtggctctgaagcggatgctgaacttcaac
gctcctcctctgaagagcacggcaactgagcccgtatggaaggtgttgatatacgaccgg
ttcggccaggacatcatctcccctctgctgtccgtcaaagagctcagggacatgggcatc
acgctgcaccttttacttcactcagacagagatccaattccagatgttccagccatctac
ttcatcatgcccacagaggagaacatcgacaggatatgccaggacctgaggaaccagctg
cacgagtcctacttcctgaacttcatctctgccatcagcagaagtaaactggaggacgtc
gctagcgccgctctggccgccaacgctgtggcccaagtcaccaaggtctatgatcagtac
ctgaacttcatcactctggaagacgacatgttcaccctctgccatcagaacaaggagctc
atctcctaccatgccatcaaccgagcagacatccaggacacagacatggaggccatcatg
gacaccatcgtggacagtctcttctgcttcttcgtcactctgggcgccgtgccgatcatt
cgctgtccccgtggcaacgcagcagagatggttgccgtgaagttggacaagaagctccgt
gagaacctgcgggacgccagaaacagcctcttcaccggagacaacatggccgccggacag
ttcagtttccagaggcctctcttcgtcctggctgatcgtaacgtggacatggccacgccc
ctccaccacacctggacctatcaggcgctgatccacgacgtcctggactaccagctgaac
agggtggtgatggaggaggggctgggggcggagccatctcccgccggtgccaggccaaag
aagaagaacaggaaggcctacgacctgaccgccgccgaccggttctggcagaagcacaaa
ggaagtcccttcccggaggtggccgagtcggtgcaggaggagctggacacctacagagcc
caggaggacgaggtcaaacgcctcaagtgcatcatgggcttagagggagaagacgaagga
gccatcagcatgttgtcagacaacacagccaagctcacctccgccatgagctctctgcct
gagctgctggagaagaagaggctgatcgatctgcacaccaacgtcgccacggccgtcctg
gaccacatcaagagtcgtaaactggacgtttactttgagtatgaagagaaactgatgagc
aagttgactttagacaaatctctactggacatcatcagtgaccccgacgctggaacccct
gaagacaaaatgaggctgttcctcatctactacatcactgctcagcaagctccttcagag
ggcgacctggaccagtaccgcacggctctgctggacgccggctgcgacctttcacccctc
aactacatcaagcagtggaaggccttcaccaagatggccgccacgccggctaactacggc
aacagtggcgtcaaacccatggggttgttctccagagtgatgaacagcggctcccagctg
gtgatggagggagtgaagaacctggtgctcaaacaacataaccttccagtgacccgtatc
cttgacaacctgatggagatgaagtccaacccggaaaccgatgactaccggtactttgac
ccaaagatgctgcgaggcagcgagagctccattcccaggaacaagaacccgtttcaggag
gccatcgtgttcgttgtgggaggaggaaactacatcgagtaccagaacctggtggactac
gccaaggtgaaaccggggaagaaggtcgtgtacggctgcagtgaactgtccaacgccgct
cagttcaccaaacagctctcccagctgggccagaagtga
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