Pungitius pungitius (ninespine stickleback): 119227400
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Entry
119227400 CDS
T07626
Symbol
caprin1a
Name
(RefSeq) caprin-1a
KO
K18743
caprin-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119227400 (caprin1a)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119227400 (caprin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
CMAS
Motif
Other DBs
NCBI-GeneID:
119227400
NCBI-ProteinID:
XP_037342057
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All DBs
Position
4:11852601..11860935
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AA seq
632 aa
AA seq
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MPSVMVGNNAAQSAIPDLGNGSNSEAMKQVLAVIDKKVRNMEKKKSKLDDCQTRKSNGEQ
LNQDQLDALTKYQEIANNLDFARELQKSFLSLGQEIQKTVKKMARREQLQREELDQQRLK
AVLELQFLLDQLGDDNVRQDLKRPDASGSPLLTDADLTSLDELYKLVGPDRNYDVRLTGQ
YEEASAHLLELLEGRDKPVAGTTYKSLKDALDKVLHSGYFDRAQTHQNGTYVEEEEQQEP
EEHTVVTESSSVQQPSEPEETTTEKYTEPIPVETTEFVNRQFIPESMYSSGDKDQVEEWT
VEAQMVNSLQLQPQAQLATEPTVTVNHGVAPPEADPVVRKQVVQDLMAQMQGTYNFMQDS
MLEFDGQALDPAIVSAQPMKPVQMGGPSTHSESRLPPTCAVSGQPESSPVSMSLSSEQSP
TPCPLSSAFPPVSKSTHTGGINVNAAPFQSVQAVFNLNAPVPPATDGQADPLKPPGQFPG
GYGHGCSSRSESTVDQQDVPQETLQSVVGGFQPQDHVMPSGGSHEESPPGATLGQSGQSF
YNSRAVPRGGARNSRGMMNGYRGSNGFRGGYEGYRPPFSNAPSSGYGQTQFNTSRDYSNN
TYQRDGYQQNYKRGPAQGPRSLPRGNAQAMRS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagtgatggttggcaacaatgctgcccagtctgccattccagacctgggaaat
ggaagtaattctgaggcaatgaagcaggttcttgctgtgattgacaagaaggttcgcaat
atggaaaagaaaaagtcaaaactcgatgactgtcagacaaggaagagtaatggagaacaa
cttaatcaggatcagctggacgccttgacgaagtaccaagagattgccaacaaccttgac
tttgctcgagaattgcagaagagcttcctgtctttgggtcaagagattcaaaagacagtg
aagaagatggctagacgggagcagctgcagcgggaggagctggatcagcagcggttgaag
gcggttttggagctccagtttttactggaccagttgggagacgacaatgtacggcaggac
cttaaacggcccgacgcctctggttcccctctgctcactgacgctgacctcacgtccctg
gatgagttgtacaaactagtgggacctgataggaactacgatgtcaggttgactggccaa
tatgaagaggcctcagcacacttgttggaactactcgagggccgagacaagccggtggca
gggaccacatacaagtcactaaaggacgctctggacaaagtgctgcacagtggttacttt
gaccgagcacaaactcatcagaatgggacgtatgtggaggaagaggaacaacaggaacca
gaggagcacactgtggttacggagtcttcgtctgtgcagcagccatcagaacctgaagaa
acaactacggaaaaatacaccgagccaattccagtggaaaccacagagtttgtaaacaga
caattcattccagaaagtatgtacagtagtggagacaaagaccaagtggaggagtggaca
gtggaggctcagatggtgaattccctccagcttcagccccaagcccagctggctacagag
ccaacagttactgtgaaccatggcgttgccccgcctgaagcggacccagttgtcaggaag
caagttgtgcaagacctcatggcccaaatgcaagggacgtacaacttcatgcaggactct
atgttggagtttgacggccaggctctggacccggccatcgtgtccgcccagcccatgaag
cctgtgcagatgggcggcccttcaacccactcagagtcaagacttccgccaacatgtgca
gtgtccggacaaccagaatcctcaccagtctcaatgtcgctctcatctgagcagtccccc
accccatgtcccctgtcctctgctttcccaccggtctccaaatctacccatactggaggc
atcaatgtcaacgctgcacccttccagtcagtgcaagcggtattcaatctgaatgcacct
gtaccaccagccactgatgggcaagcagaccctctgaagccacctggccagttccctggg
ggctatgggcacggctgtagcagccggtcagagagtactgtagaccagcaggacgtcccg
caggagacattacagtccgttgttggagggttccagccccaagaccatgtcatgccctca
ggaggaagccatgaagagtctcccccgggcgctacgcttggacagtcaggccagtccttc
tacaacagcagggctgtgcccagaggaggagccaggaacagccggggcatgatgaacgga
tatcggggctccaacggatttagagggggttatgaaggttatcgccctcctttctcaaat
gctcccagcagtggttatggtcaaacccaatttaacacctctcgtgactattccaataac
acctaccagcgggacggatatcagcaaaactacaagcggggacctgcccaaggacctcga
agtttgccaagaggaaatgctcaagcaatgaggtcctga
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