Pungitius pungitius (ninespine stickleback): 119227422
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Entry
119227422 CDS
T07626
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119227422
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119227422
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
LRR_1
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
119227422
NCBI-ProteinID:
XP_062413440
LinkDB
All DBs
Position
14:1708188..1766298
Genome browser
AA seq
1102 aa
AA seq
DB search
MNQAEDPEDSVPPSEAPLWGGHDRQTKAQRIYQGPEPGPGPSCVSMKSNQSMEPPLVFKD
ARPSADASSHQKRRKSPEPRCVSMKSHHSKGHFINFKDGGRSYDPQEDQESSEVPTESAQ
QHQTHLDSIFMLLEENILTFVKNELKKIQKVLSSDYPECLEKQDEEVLDEEQRRSREAFV
KISVHFLRRMKQEDLAERLQSRLPAAVCQRELKSNLKKKFQSVFEGIAKAGNPTLLNEIY
TELYITEGGTAEVNEEHEVRQIEAASRRPGRPETTIRQEDLLKASAGGEEPIRTVMTKGV
AGIGKTVLTQKFTLDWAEDKDHQDIQFTFPFTFRELNVLREKKFSLVGLVHHFFSETRAA
GICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTETSSVDVLLTNLIRGKLLPSARLW
ITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQASMIISHIKTSQSLHIM
CHIPVFCWITAGVLEDVLKTRERRDLPKTLTEMYIHFLVVQSKVKKVKYDGGAETDPHWS
PESRKMIESLGKLAFDQLQKGHLIFYESDLTECGIDIRAASVCSGVFTQIFREERGLYQD
KVFCFVHLSVQEFLAALHVHLTFFSSGVNLLSGEPGPMRLYQRAVDQALQSPNGHLDLFL
RFLLGLSLETNQSLLRGLLTQTGSTSQTNQKTVQYIKEKISENVSPEKSINLFHCLNELN
DGSLVEEIQQSLSSGRLSTDKLSPAQWSALVFILLSSQEDLEVFDLKKYSASEEALLRLL
PVVKASNKVLLSGCNLSERSCEVLSSVLSSQSSSLRELDLSNNHLQDSGVKLLCDGLKSP
HCDLETLRLSGCNLSERSCEVLSSVLSSQSSSLRELDLSNNHLQDSGVKLLCDGLKSPHC
DLETLRVEPAGVRWMTPGLKKYSCELTIDTNTVNRDLKLSDNNRKVTCVKKEEVQSYPDH
PDRFDFYPQQLCRTGLTGRCYWEVEFRGSVFVSVSYRGIKRKGGSRDCLFGHNDQSWSLR
CSNEGYYVCHNETQTPIISSSSSSSGRVAVYVDCPAGSLSFYRVSSDSLIHLHTFSTTFT
EPLYPGFGSWSGSGSSVSLCPL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggctgaggacccagaggacagtgtccctccctctgaagcccctctgtggggg
ggacatgacagacagaccaaagctcagaggatttaccagggaccagaaccaggacctgga
cccagctgtgtgtccatgaagagtaaccagtccatggagcctcctctagtcttcaaagat
gcccgtccctctgctgatgcaagttcacatcagaaaagaagaaagtctcctgaacccaga
tgtgtgtccatgaagagtcatcattctaaaggtcatttcattaacttcaaagatggaggc
cgttcttatgacccacaagaggaccaggagagctcagaggttcccacagagtctgcccag
cagcatcaaacccacctggactccatcttcatgctgctggaggagaacatcctcaccttt
gtgaagaacgagctgaagaagatccagaaggttttgagttcagattacccagaatgctta
gagaagcaggatgaggaggtgctggatgaagagcagaggaggagcagagaggcatttgtg
aagatctcagtgcacttcctgaggagaatgaagcaggaggatctggctgagcgtctgcag
agcagacttcctgctgcagtttgtcagcgtgaactcaaatccaacctgaagaagaagttc
cagtctgtgtttgagggcatcgctaaagcaggaaacccaacccttctgaatgagatctac
acagagctctacatcacagagggagggactgcagaggtcaatgaagaacatgaggtcaga
cagattgaagcagcatccaggagaccaggcagaccagaaacaaccatcagacaagaagac
ctcctcaaagcctcagctggaggagaagaaccaatcagaacagtgatgactaagggagtg
gctggcattgggaaaacagtcttgacacagaagttcactctggactgggctgaagacaaa
gaccatcaggacatacagttcacatttccattcaccttcagagagctgaatgtgctgaga
gagaagaagttcagcttggtgggacttgttcatcacttcttcagtgaaaccagagcagca
ggaatctgcaggtttgaagagttccaggtcgtgttcatctttgacggtctggatgagtgt
cgacttcctctggacttccacaacaatgagatcctgactgatgtcacagagacctcctca
gtggatgtgctcctcacaaacctcatcagggggaagctgcttccctctgctcgcctctgg
ataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttggcatggtgaca
gaggtcagagggttcactgacccccagaaggaggagtacttcaggaagaggttcagagat
gaggagcaggccagcatgatcatctctcacatcaagacctcacaaagcctccacatcatg
tgtcacatcccagtcttctgctggatcactgctggagttctggaggacgtgttgaagacc
agagagagaagagatctgcccaagaccctgactgagatgtacatccacttcctggtggtt
cagtccaaagtgaagaaggtcaagtacgatggaggagctgagacggatccacactggagt
ccagagagcaggaagatgatcgagtctctgggaaaactggcctttgatcagctgcagaaa
ggccacctgatcttctatgaatctgacctgacagagtgtggcatcgatatcagagcagcc
tcagtgtgctcaggagtgttcactcagatcttcagagaggagagaggactgtaccaggac
aaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccat
ctgaccttcttcagctctggtgtcaatctgctgtcaggagaacctggaccaatgcgtctc
taccagagagctgtggaccaggccttacagagtcctaatggacacctggacttgttcctc
cgcttcctcctgggtctttctctggagaccaatcagagtctcctacgaggtctgctgaca
cagacaggaagtacctcacagaccaatcagaagacagtccagtacatcaaggagaagatc
agtgagaatgtgtctccagagaaaagcatcaatctgttccactgtctgaatgaactgaat
gatggttctctagtggaggagatccaacagtcccttagttcaggacgtctctccacagat
aaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcacaagaagat
ctagaggtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctg
ccagtggtcaaagcctccaacaaagttctactcagtggctgtaacctctcagagagaagc
tgtgaagttctgtcctcagtcctcagctcccagtcctctagtctgagagaactggatctg
agtaacaaccacctgcaggattcaggagtgaagctgctgtgtgatggactgaagagtcca
cactgtgacctggagactctcagactcagtggctgtaacctctcagagagaagctgtgaa
gttctgtcctcagtcctcagctcccagtcctctagtctgagagaactggatctgagtaac
aaccacctgcaggattcaggagtgaagctgctgtgtgatggactgaagagtccacactgt
gacctggagactctcagggtggagcctgctggagtccgatggatgacaccaggtctgaag
aagtattcctgtgaactcacaatcgacacaaacacagtaaacagagacctcaaactgtct
gacaacaacaggaaggtgacatgtgtgaagaaggaggaggttcagtcatatcctgatcat
ccagacagatttgacttctatcctcagcagctgtgtagaactggtctgactggtcgctgt
tactgggaggtcgagttcagaggaagtgtttttgtatcagtgagttacagaggaatcaag
aggaaaggaggcagtagagactgtttgtttggacacaatgatcagtcctggagtctgaga
tgctctaatgaaggttactatgtctgtcacaatgagacacaaacacccatcatctcctcc
tcctcctcctcctctggtagagtagcagtgtatgtggactgtcctgctggctctctgtcc
ttctacagagtctcatctgactcactgatccacctccacaccttcagcaccacatttact
gaacctctttatcctgggtttgggtcctggtccggttctggttcctcagtgtctttgtgt
cctctgtag
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integrated database retrieval system
