Pungitius pungitius (ninespine stickleback): 119227463
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Entry
119227463 CDS
T07626
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119227463 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119227463 (stag1a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119227463 (stag1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
119227463
NCBI-ProteinID:
XP_037342152
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Position
14:11155036..11185439
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AA seq
1260 aa
AA seq
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MITSELPVLQDTSNESGATDAVALSMSIGEIEDPEVKGKKKRGRPGKQAPASNKKPRKAP
AEKAVGVARGRGKANGVAQHNGDGGDPVTLFEVVKLGKSAMQSVVDEWIESYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPLWKKFRYN
FCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIAGKRANDKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPLAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLTEEPVQGEEVLLDRQESALIELMVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPQ
FFDLDVYSAGRMEKHLDALLKQIRLVVEKHIEVDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSVEELLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
RLLKAGIEQGSMPEQIAVQALQCSHYSVLWQLVKITEGAPSKDDLVALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLVSGGRDGLQPLVFNPESTLQNELLNFVLDHV
FIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGPELPPINLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKAGSVRSK
KGRPPAHKKRIEEESSVESSWMLRNDTLQTPAALQTPQLTSTVLRENRPAEHLPDPDSEP
GSENDFVHNPQMQMSWLGQQKMEEVNRKDRTGLNYIKARSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagctccctgtcctacaggacacttccaatgagtctggggcaacagac
gccgttgctttgagtatgagcatcggcgagatcgaagatccagaggtgaaaggcaagaag
aagagaggcaggcctggaaaacaagcaccggcatccaataagaaaccgaggaaagcaccg
gcggaaaaggccgtgggcgtagcgagagggcgcgggaaagccaacggcgtcgctcaacac
aatggagacggcggcgaccccgtcactctgtttgaggttgtcaaactgggcaagagcgcc
atgcagtctgtggtggatgagtggatcgagtcatacaaacaggacagagacttggcgctg
ctggatctcatcaactttttcatccagtgctcaggctgcaaaggcactgtgaggattgag
atgttcaggaacatgcagaatgcagagatcatccgcaagatgaccgaggagttcgacgag
gacagcggggattacccgctcaccatgccggggcccctgtggaagaagttccgctacaac
ttctgcgagttcatcagcgtgttgatccgccagtgtcagtacagcatcatctacgacgag
tacatgatggacacagtgatctccctcctcaccgggctgtcggactctcaagtgcgcgcc
ttcagacacacgtccacgctagcagccatgaagctgatgacggcgctggtgaacgtggcg
ctgaacctgagcattcaccaggacaacacgcagaggcagtacgaggccgagaggaacaag
atagccggcaagcgggccaacgacaagctggagctgctgctacagaagaggaaggagctt
caggaaaaccaagatgaaatagagaacatgatgaactccatcttcaagggaatctttgtg
catcgctatagggacgccattgctgaaattcgagccatctgtattgaggagattggcgtg
tggatgaagatgtacagcgatgcttttcttaatgatagttacctgaaatatgttggctgg
acactacacgaccggcaaggagaggtgcgtctgaagtgcctgaaggctctgcagaacctg
tacacaaaccgagaactcttcccaaagctagagctgttcaccaaccgcttcaaggaccgt
atcgtatccatgacgctggataaggagtacgatgtggccgtggaggccatccgactggtc
acgctcatcctgcagggcagtgaagacgccttatccaatgaggactgtgagaacgtttac
cacctggtttactctgcccaccgacccgtggccgtcgctgcaggagagttcctgcacaga
aaattgttcagtcgtcatgaccccctggcagaggaagcgctggcgaagcggcgagggagg
agcagtcccaacgggaatctcattcgcatgctggtgctcttctttctggagagtgagcta
catgagcatgcggcctacctggtggactccttgtgggaaagctcccaagagctgctgaaa
gactgggagtgtatgactgaactcctgacggaggaacctgtgcagggggaggaggtgttg
ttagacagacaggagagcgctctgattgagctgatggtgtgcaccatccgacaggcagca
gaggcacacccacccgttggcagaggtaccggcaaacgggtgctgacagcaaaggagagg
aagacccagatagatgacaagaacaaactgacagagcacttcatcatggctctgcccatg
ctgctgtccaagtaccaagctgactcggagaaggtcgccaacttgctgcagatccctcag
ttctttgacctggacgtgtacagcgccgggcgcatggagaagcacctggacgccctgctg
aagcagatccggctggtggtggagaagcacatcgaggtggacgtgctggaggcctgcagc
aagacctacagcatcctctgctccgaagagtacaccatcatgaaccgcgtggacatcgcc
cgctcgcagctcatcgacgagatgacggatcgcttcgcgcactccgtcgaagagcttctt
caggaggcggaggaggccgatgatgacgatatctacaacgtgctatccacgctcaaaaga
ctcaccgccttccacaatgcgcacgacttgacgcggtgggacttgtttgggaactgctac
cggctgctgaaggcgggcattgagcagggctccatgccggagcagatagccgtccaggcc
ctgcagtgctcccactactcggtcctgtggcagctggttaagatcacggagggggctccc
agcaaggatgacctggtggctctcagaagagtggtgaagtctttcttggctgtgtgccag
cagtgcctgtcaaacgtcaacacacctgtcaaagaacaggccttcatgcttctctgcgac
ctgctgatgatcttcagtcaccagctggtttccggcggcagagatggcctccagccactt
gtcttcaacccagagagcactctgcagaacgagctgctcaactttgtcctggaccatgtc
ttcatcgaccaggacgacgagaatcagagcatggaaggagacgaggaagacgaggccaac
aagatcgaggctctccacaaaaggagaaacctgctcgctgctttctgcaagctcatcatt
tacgacatcgtagacatgcccgctgctgccgacatcttcaaacactacatgaagtattac
aatgattacggcgacatcatcaaggagactctgagtaaaacccgacagacggacaagatt
ctttgtgccaagacgcttatcctcagtctgcagcagctgttcaacgagctgctgcaggac
caggggcccaacctggaccggacgtcttcccacgtcagcggcatcaaggagctggcccgc
cgcttcgccctcacctttggcctggatcagatcaagacccgggaggcggtggccacgctg
cacaaggatggaatcgagtttgcatttaagtaccagaatcctcgaggaccagagcttcct
cccatcaacttggccttcctggaggttctgagcgagttttcttcaaaactcatccgccaa
gacaagaaaacggtccactcgtacctggagaagttcatgtcggagtcgatgtcggagcgc
cgggaggacgtgtggctgccgctgatctcctacaggaacagcctgctgacggggggagac
gaggaccacatgtcagtcacgtcgggctccagcagcaaggccggctcggtccgcagcaag
aagggccgaccgccggcccacaagaagcgcatcgaggaagagagcagcgtagagagctcg
tggatgttgcgtaacgacactcttcagacgccggcagctctgcagacgcctcagctgacc
tccaccgtcctccgagagaacagaccagcagaacacctgcccgacccggactcagagccg
gggtcggagaacgactttgtgcacaatcctcagatgcagatgtcgtggctcgggcagcag
aagatggaggaggtgaacaggaaggaccggacgggcttgaactacatcaaagcacgcagc
aaccagggcgtccgacagactgtgcgtgggttgatggaggacgacgcagagcccatcttt
gaggatgtgatgatgtcatcgcgaggccaacttgaggacatgaatgaggagtttgaagac
acaatggtaatcgacttgccaccatcgagaaacagacgggaaagagcagaattaagacca
gacttctttgactctgcagcgatgattgaggatgagtcgggattcagcatgcccatgttc
tga
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