Pungitius pungitius (ninespine stickleback): 119227497
Help
Entry
119227497 CDS
T07626
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119227497 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119227497 (myo5aa)
04131 Membrane trafficking [BR:
ppug04131
]
119227497 (myo5aa)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119227497 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119227497 (myo5aa)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119227497 (myo5aa)
mRNA cycle factors
P-body specific factors
119227497 (myo5aa)
Membrane trafficking [BR:
ppug04131
]
Others
Actin-binding proteins
Myosins
119227497 (myo5aa)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119227497 (myo5aa)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119227497 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
DUF5382
HTH_17
AAA_16
nSTAND3
Ac76
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119227497
NCBI-ProteinID:
XP_062417805
LinkDB
All DBs
Position
4:complement(18019194..18058050)
Genome browser
AA seq
1843 aa
AA seq
DB search
MAASELYTKRARVWIPDAEEVWKSAELNKDYKNGDASLQLMLEDGTNIEHKLDPKTKNLP
YLRNPDILVGENDLTALSYLHEPAVLHNLKVRFMDSKLIYTYCGIVLVAINPYETLGIYG
SDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSTSEANVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDTRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKMLKLSSANDFLYTRQGRSPVIDGVD
DTKELSSTRKAFTLLGINESNQMGLFQVLAAILHLGNVEIKDRDSDSSVIPPNNGHLTAF
CDLVGVTYQDMSQWLCHRKLKTATETYIKTLPRLQATNARDALSKHIYAKLFNWIVEHVN
KALITNFKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLFEK
PRMSNRAFIIQHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFPLLVELFHDGEKAIS
PTGQVPGTGGRTRLSIKPEKGREKSSKEHKKTVGCQFRNSLQMLMETLNATTPHYVRCIK
PNDFKLAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLPD
KRLTCRNVLEHLVQDQDKYQFGKTKIFFRAGQVAYLEKLRAEKLRAACIRIQKTIRCWLA
RKKYLRKRSAAVTIQRFTRGYQARCLAKFMRRTQAATTIQKYQRMCVEKKRYRQKQAAAL
VMQTILRAYMARQKYRALLRESKVVIIQKRVRGWLARCWYKRCLVSLVYLQCCFRRMKAR
RELKKLKIEARSVEHFKKLNKGMENKIMQLQRKLDEQNKENRLVNERLVGLENTYTTESE
RMRGELSRLRGAEEDAKNKGHQVTSLLEELEKLRKELSSTQKEKKTIEDWAQTYRSEMEK
MVSELKNQNGSLKKEKDDLNRLIQEQSQQMTEKMARAILEETQQLKTDLNEERSRYQNLL
TEHLRLEEKYDDLKEEMVSSNVSKPGHRRTDSTHSSNGSEYTYNSECTELEDGSRATEDV
TRGIDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFQRARARDDVEFKKARGAELEYES
LKRQELESENKKLRHDLKEIRQSLVGNAATGAGAPGSPAYKVVLEQLNASCEELEVRKEE
VLILRSQLVSQKEAMHHKETMTEPSVYVEDVSKLKDAGELKQAYVGLKDTNRLLEHQLQT
QRRGYDSEVESLRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLEL
LAEDPTASREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQTEGQTS
PGQMVDEPIHPVNIPRREKDFQGMLEYNKEDELKLVKNLILELKPRGVAVNLIPGLPAYI
LFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYS
GDEAFMKHNSQRQNEHCLSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPMIVSGMLEH
ETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIKQVVKQQ
FYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMTFGAKETLEPLIQAAQ
LLQVKKKTDEDADAICSMCLGLTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQTRLRDRC
ESPQLLMDTKMIYPVTFPFSPSSLALETIQIPSSLNLGFLTRV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggagctgtacacaaagagggctcgggtgtggatccccgatgccgaggag
gtgtggaagtccgccgagctcaacaaggactacaaaaatggcgacgcctccctgcagctc
atgctggaggatggaacgaacatcgagcacaagctggaccccaagaccaagaaccttcct
tacctgcgtaaccccgacatcctggtgggcgagaatgacctcacagcactcagctacctc
cacgagccggccgtgctgcacaacctcaaagtccgcttcatggactccaagctcatctac
acttactgtggaatcgtcctggtggccatcaacccgtatgagacgctgggtatctacggc
tcggacatcatcaacgcgtacagcggtcagaacatgggagacatggacccacatatcttt
gctgtggccgaggaggcttacaaacagatggccagggacgagaggaaccagtcgatcatt
gtcagtggggagtccggagcaggaaagacggtgtcggccaaatacgccatgagatacttt
gctacggtcagcggctccaccagcgaggccaacgtggagcagaaggtcttggcttccaac
cccatcatggaggccattggaaatgcaaagaccacccgaaatgacaacagcagtcgcttc
gggaaatacatcgagatcggcttcgacacgcgctaccgtatcatcggcgccaacatgagg
acgtatctgctggagaaatcacgggtggtgtttcaggctgacgaggaaaggaattatcac
atcttctatcagctctgtgcatcatcccatctgcctgagttcaagatgctgaagctgagc
agcgcaaacgacttcttgtacaccaggcagggccggagcccggtgatcgacggcgtggac
gacacaaaggagctgtcctccactcgaaaagccttcacattgctcggtattaatgaatcc
aatcagatgggtttgttccaggtcctggctgcaattcttcatctggggaacgtggagata
aaggacagagactcagacagcagcgtcattccacccaacaatggccacctgacagcattc
tgcgatttggtgggcgtgacctaccaggacatgtctcagtggctgtgccacaggaagctg
aagacggccacggagacgtatatcaagaccctgccccgcctgcaggccaccaacgcccgc
gacgcgctgtccaaacacatctacgctaagctcttcaactggatcgtggagcacgttaac
aaagccctaatcaccaattttaaacaacactccttcatcggggtccttgacatctacggg
tttgagacatttgagatcaacagctttgagcagttctgtatcaactacgccaacgagaaa
ctccagcagcagttcaacatgcacgtgttcaagctggagcaggaggagtacatgaaggag
caaatcccctggactctgattgacttctacgacaatcagccctgcatcaacctcatagag
gccaagatgggcatcctggacctgctggacgaggagtgcaagatgcccaaaggttccgat
gattcttgggctcagaagctctacaacacccacctgaagacctgctcgctcttcgagaag
ccacgcatgtccaaccgcgctttcatcattcaacatttcgccgacaaggtggagtaccaa
tgtgacggcttcctggagaagaacaaggacacagtgaatgaagaacagatcaatgtgctg
aaggccagcaagtttcccctgctggtggagctgttccacgacggggagaaagccatcagt
cccactggtcaggtccccggcaccggaggccgcacgcgcctcagcatcaaacctgagaag
ggccgcgagaagagcagcaaggagcacaagaagactgtcggctgccagtttcgtaactcg
ctgcagatgctgatggagactttgaacgcaacgactccgcactacgtgcgctgcatcaaa
cccaacgacttcaagctggccttctcgtttgatcctaaacgcgcggtgcagcagctcaga
gcctgcggcgtcctggaaaccatccgcatctctgctgcaggtttcccatccagatggacg
taccaggagttcttcagccgatacagagtactgatgaagcagaaggacgtgttacctgac
aagaggttgacctgcagaaatgttctggagcatctggtgcaggaccaggacaaatatcag
tttggaaagaccaagatcttcttccgggctggccaggttgcttacctggagaagttgagg
gcggagaagttgcgcgctgcctgcattcgcatccagaaaaccattcgctgctggctggca
cgcaagaagtacctgcgcaagcgcagcgctgccgtcaccatccagaggttcaccagaggg
taccaggctcgctgcctggccaagttcatgcgtcgcacacaggcggccaccaccatccag
aagtaccagcgcatgtgcgtggagaagaaacgctacagacagaagcaggctgccgctctg
gtcatgcagacaatcctcagagcttacatggcccggcagaagtaccgggcgttactgcgg
gaaagtaaggtggtgatcattcagaaacgcgtccgtggctggttggctcgctgctggtac
aagcgctgcctcgtctccctggtctacctgcagtgctgcttccgcaggatgaaggccagg
cgcgagttgaagaagctgaagatcgaggctcgctcggtggagcacttcaagaagctcaac
aaaggcatggagaacaagatcatgcagctgcagaggaaactcgacgagcagaacaaagaa
aaccgactggtcaacgagaggctagtcggtctggagaacacctacacaacggagagcgag
cggatgcgtggcgagctgagccggctccgaggggcggaggaggacgccaagaacaaaggc
caccaagtgacctcgctcctggaggagctggagaagctgaggaaggagctgagttccaca
cagaaggagaagaagaccatcgaggactgggcgcagacctacaggagcgaaatggagaaa
atggtctcggagctgaagaatcagaatggctcgttgaagaaagagaaggacgacttgaac
aggttgattcaggaacagagtcagcagatgacagagaaaatggcccgtgcgatactagag
gagactcagcagctgaagaccgatctgaacgaggagcgatctcgctaccagaatctcctg
acggagcacctccgtctggaggagaaatacgacgacctgaaggaggagatggtttcctcg
aacgtctccaagcccggtcacaggagaacagattccacccacagcagcaacggatcagag
tacacgtacaactccgagtgcaccgagttggaagatggttcccgtgccaccgaggatgtg
acacgaggaatcgacacctcgctgaccctcaagctgcagaagcgtttaaccgaactggag
caagaaaagcagtcgctgcgcaacgaactggaaaacaaagaggaccagttccagcgggct
agagccagggatgacgtagaatttaaaaaggctcgtggggcagagctggagtacgagtcc
ctgaagcgtcaggagctggagtcagagaacaagaaactgagacatgacctgaaggagatc
aggcaaagcctggtgggtaacgcagccacgggcgctggggctccgggctccccggcctac
aaggtggttctggagcagctcaacgcctcctgtgaggagcttgaggtccgtaaggaggag
gtgctgatcctgcgctcccagctggtcagccagaaggaagccatgcaccacaaggagacc
atgaccgagccgtccgtctacgtcgaggatgtgtcgaagctgaaggacgcgggtgaactc
aagcaagcttacgtgggcctcaaagacaccaacaggctactggagcaccagctgcagact
cagcggagaggttacgacagcgaggtggagtcactgcgcggcgagctgcagaatgtcaag
gaggagaacaaccggcagcagcagctcctggcccaaaacctgcagctgccaccggaggcc
cgaatcgaagccagtctgcagcacgagatcacccggctcaccaacgagaacctggaactc
ctggctgaagaccccacagcatcccgagaagctcgagtcatcattttacgacggatggtt
gatctgatggagcagctggagaagcaggaccgaaccatccgcaagctcaagaagcagctg
aaggtttactccaagaggatcggcgagatgggggcgggtcaaaccgagggacagacgtct
ccgggacagatggtggacgagccgattcacccggtcaacattcctcgcagggagaaagat
ttccaagggatgctagagtacaacaaggaggatgagctcaagctggtcaagaacctcatc
ctggagctgaagcctcgcggtgtggctgtgaatctgatcccaggtctgccggcctacatc
ctgttcatgtgtctgagacatgcagactacgtcaacgatgaccagaaggtccgcaccctg
ctcacctcaaccatcaacagtattaagaagatcctcaagaaacgaggagacgactttgag
acggtctccttctggctgtcgaacacatgtcgctttttacactgtctgaaacaatacagc
ggagacgaggctttcatgaagcacaactcgcagaggcagaatgagcactgtctgtccaac
ttcgacctggcagagtaccgacaggtgatcagcgacctggccatccagatctaccagcag
ctgatcaaatgcatggagaacatcctccagcccatgatagtttctggcatgctggaacac
gagaccatccagggggtgtctggggtgaagcccacgggcctccgcaagcgtacgtctagc
atcgcggacgagggaacctacaccctggactccatcctgcggcagctcagcgccttccac
tctaccatgtgccagcacggcaccgaccccgagctcatcaagcaggtggtgaagcagcag
ttctacatcatcggagcagtcaccctcaacaacctgctgctacgcaaggacatgtgctcc
tggagcaaaggcatgcagatcaggtacaatgtgagtcagctggaggagtggctcagagac
aaaggtctgatgactttcggagccaaggagactctggagcctctgatccaggccgctcag
ctgctgcaggtgaagaaaaagactgacgaggacgctgacgccatctgctccatgtgcctg
gggctcaccacagctcagattgtgaaggtcttgaacctctacactccagtcaacgaattt
gaggagagagtatcagtgtcattcatacgaaccatacagactcgcttgcgagatcgttgt
gagagtccccagttgttgatggacacaaagatgatttacccggtcaccttcccgttcagc
ccttcatccctcgccctggagaccatccagatccccagctcgctcaacctgggcttcctc
acccgcgtctaa
DBGET
integrated database retrieval system
