Pungitius pungitius (ninespine stickleback): 119227506
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Entry
119227506 CDS
T07626
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227506 (trip11)
Membrane trafficking [BR:
ppug04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
119227506 (trip11)
Retrieval pathways
119227506 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
Taxilin
DUF4407
Mod_r
TMF_TATA_bd
DUF6317
SlyX
Motif
Other DBs
NCBI-GeneID:
119227506
NCBI-ProteinID:
XP_037342223
LinkDB
All DBs
Position
14:13481366..13500189
Genome browser
AA seq
1962 aa
AA seq
DB search
MSSWLGGIGSGLGQSLGQVGGSLSSFTGQISNFTKDMLLEGVEEVGDAATELQVSNNKLA
DIESALTSQKSEYDRIRKLNAELEEKLEASEIQIKGQSAEYRSLLQQKDVEISHLKARQS
GLMEEVQNLPAMLPVTTSASTATSSSISSYMSQPSGSHQGFHGDEMDLSDVIWSQQEINR
LSAEVMRLEAEAAHWRRMSQASTAAAAGNGDQGEVLKLQRTIKELREEMSREVDEHQHEL
AALQDAQRQKLADITRRHREDLAEYEERIEELEDKNHSGGPSTSPSDASKVQQLQKAISS
LQETADQREKQLAELSAGLEEAQAKQASLQLEKDEVQEENTELLQNYTRLQASVTELQTR
VQEQEGKSLQKAQLDHEIQVLRKSLAAAEKEIEGLKSMAGAESKEEVEHADILELNTIIE
TLRQEKEVLEQEKLSIQEQRVSNDAAESGDTESLEDLKAELERRDNALRNMEEERDTLMS
ELEELDRQNQEATQHMISVKEQLSGQLREAEAELTGLTAELNTTKDQKRTLEQELESQKE
KASQSAFTLNDLHMGKQELELRVKDLKDKLGHAQEQSREARREITELKSTLEEQFSFAKT
QLDQSRERGSEAQGTEEKLAGKEGELSELRRELDEIRSSHNKALSEDYELKMENRRLKVE
TEQAVGNAEELAKQIKESQAALNRTLREKETRIEALKLEKSQLEGELEQAERTLAEQGKQ
FQQTIEELTRARSLDASALQTEHERAIKLNQEKDMEIAQLKRDVEQVASDHRDTNEMLSI
TVAGQKQLTDLLQEKDVFVDTLKQNALDLQKEMEDSILVLTKESDALKQALEEKDKQLGC
MKEKNSHLKEEIDRLRDQQSRPQPLSEPRTLDIITELETEITQLRSSRNCLEEEVQTLRR
TMEELQASLLLSQQSLQAQQTELEQTHARHQQTTLNYDRLIHARDEEISSLQRTVDQLSG
SRVRDSPPVQGEVILQEEKTQTLSQENGNEKHDLSKVDIERLVRGIKEKETEISLLNEKN
LSLTRQLDQLVVSRDEVGKLSQMILQKDLEIQALHARMSLVGGGGHSQDVMFLQQQLQAY
AVEREQVLGVLNEKTRENSQLRSDYHRLMDIMAGKEAALSKLQQENQRLSNMSDPSGSQE
MFKETIQNLSRIIREKDIEIDALTQKCQTLVTVLQSSAGESGGGSGGVSSNQFEELLQER
DTLKQQVKKMEEWKQQVITTVKNMQHESAQLQEELIKLQGQVSADSDCSSKLSVDYAGLI
QSYERKESRLGSLSQELAQVQQTITQLSTTKDVLLVKLDSVAQAPEVAGAPATGASLAAA
PVDQTSQGLNHEKLREEIVQLRIELAEKENAIKTLQENNHRLSNAASATESEQRSQAGEA
RLVRERLEALQRSVREKDLLIKTKGDQLSHVSETLRNRESDNEVLKQAVTNLKERALILE
MDGKKLKEENELVASRSREKESEFRALQETNMQVSLLLREKEFELSAVSEKSATVERMLK
DKEQGKSGELNQLLNELKSMQEKAFAFQQERDQMMMALKQKQMETTAVHTELQHVRDKEQ
RLNLELDRLRNHLMEIEDSYTREAVSAEDRETELRRRVALLEEKLATSSSAVENASQQAS
MQVESLQEQLTGVVKQRDETLIRLRTSQEQVNQYAVSLSNLQMVLEQFQQEEKAMYSAEL
DMYKKERDEWKRKALRLEDQASALQINLDEANAALESASRLTDQLDLNEEQIQELKHQVE
IRQEMLEEAQKKLMNLLNSTEGKIDKVLMRNLFLGYFHTPKTKRADVLRLMGSVLGLSRE
DVDKMLGEDGGHGVTGWVSSWLGGRGAQSVPNTPQRPTSGQGLNSSFSEMFVKFLEIEST
PSLPAAKLPAHDIKALGAPPPRRTGSASGAAGGAALAKRPGESNPFLAPRSAAVPLVAGS
SSGGSGSHLLMKPICEALPTFTPVPVSSEASAGSVLKDLLKQ
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctggctggggggaatcgggtccggcctcggccagtctctgggccaggtcggc
gggagcctgtcctctttcaccgggcagatatcaaacttcaccaaagacatgctactggaa
ggagtggaagaagtaggggatgctgccacagaactgcaggtatccaataacaagttggct
gacatcgagtccgctttgacttctcagaaatctgagtacgaccggataagaaagctcaat
gcagagctcgaggagaagctggaggcctcagagatccagattaaaggacagtctgcggag
tacagatccctcctgcagcagaaagatgtggagatcagtcacctgaaagctcggcagagt
ggactcatggaggaagtccagaatctgccggccatgctgccggtcaccacttccgcctca
accgctacctcctcttctatttcgtcctacatgtcacagccctcagggtcccaccagggt
ttccacggtgatgaaatggacctcagcgacgttatctggtcgcaacaggagatcaatcgg
ctgtctgcagaagtaatgcgtctggaggcagaggcggcccactggaggcgaatgtctcag
gcatcaacagcagcagcagctggtaatggcgaccagggagaggttctcaaactccaaaga
actataaaggagctgagggaggagatgagccgggaggtggatgaacaccagcatgaactg
gcagctctgcaggacgctcagcggcagaagttggccgacatcacgcggcgacacagagag
gacctagcagagtacgaggagaggatagaggagctggaggacaaaaatcatagtggtggt
ccatccacttctccatcagatgcctccaaggtgcagcaacttcagaaggccataagctcc
ctgcaggaaacggcggatcagcgggagaagcagctggccgagctctctgccggtctggag
gaggcacaggcgaagcaggcgtcgctgcagcttgagaaagacgaggtccaggaagaaaac
accgagctgctgcagaactacacgcggctgcaggcctcagtcaccgagcttcagacccgg
gtacaagagcaggagggcaagtctctgcagaaagcccagctggatcacgagatccaggtg
ttgaggaaaagccttgcagctgcagaaaaagaaatagaaggactgaaaagcatggctggg
gctgaatccaaggaagaagttgagcatgcagacatcttagaactgaacaccattattgag
acgttgagacaagaaaaggaagtcctagaacaagaaaagctcagtatccaagaacaaaga
gttagcaatgatgcagctgagtctggtgacacagagtctctggaggatctgaaggcagag
ctggagaggagggacaatgcactacgaaacatggaggaggaacgagacactctgatgtct
gaactggaggaactggaccggcaaaaccaagaagcaacacagcacatgatctcagtgaag
gagcagctctctggacagctgagggaggccgaggcagaactcacgggactgactgcagag
ctgaacacaaccaaagaccagaaaaggacactggagcaagagctggagagccaaaaagag
aaggccagccagagcgctttcacccttaacgacctgcatatgggcaaacaggagctggaa
ctgagagtgaaggacctgaaagacaaactgggacatgcacaggagcagagcagggaggca
cgaagagaaatcacagagctgaaaagcactcttgaggagcagttttcttttgccaaaaca
cagctggatcagtcacgggagagaggaagtgaggcacagggaaccgaagagaagctagcc
gggaaggagggcgagctgtcagagctcaggagagaattggatgagataagaagctctcac
aataaggcgctgtcagaggactatgagttgaagatggagaacaggaggttgaaggtggag
actgagcaggctgtgggtaatgctgaggaactagccaagcagataaaggaaagccaggcg
gctctgaacaggacattgcgggaaaaggaaactcgaatcgaagctctgaagctggagaaa
agtcaactcgagggtgaattggagcaggctgagcggacgctagcggaacaggggaaacag
ttccagcagaccatcgaggagttgactcgagcccggtccttggacgcgtccgctttacag
acggagcacgagcgcgccatcaaactcaaccaggagaaagacatggagatagctcagctg
aagagagacgtggagcaggtggcgtccgaccacagagacaccaacgagatgctctccatc
acagtcgcggggcagaagcagctgacagacctgctgcaggagaaggatgtctttgtggac
acgctaaagcaaaacgctttggatttgcagaaggagatggaggacagcattttagttctg
acaaaggaatctgatgccctcaaacaggcactagaggagaaggataaacagctgggctgt
atgaaggagaagaacagtcatttgaaggaagagatcgaccggctcagggatcagcagagc
agacctcagcctctgtccgagcccaggaccttggacatcatcacagagctggagacagag
atcacccagctcaggtcctccaggaactgtctggaagaggaggtccagactctgaggaga
accatggaagagcttcaggcctctctcctcctgtcgcagcagtccctgcaggctcagcag
actgagcttgagcagactcacgctcgccaccagcagacgaccctgaactacgaccggctc
atccacgccagagacgaggagatatcctcgctccagcggaccgtagatcagctcagtggg
agtcgagtccgcgactcgccacctgtgcagggcgaggtaatcctgcaggaggagaagacc
cagaccctgagtcaggagaacggcaacgagaaacacgacctgtctaaggtagacatagaa
agactggtgaggggcatcaaggagaaagaaaccgagatcagcctgctgaacgagaagaac
ctctcactgacccgacagctggatcagctggtggtgtcccgtgatgaggtgggaaagctg
tcccagatgatcctgcagaaggatctggagattcaggcgctacacgccagaatgtccttg
gtcggagggggtggacacagccaggatgtcatgttcctgcagcagcagctgcaggcgtac
gccgtggagagagagcaagtgctgggcgtgctcaacgagaagaccagagagaacagccag
cttcgctccgactaccaccgcctcatggatatcatggcggggaaggaggcggccctgtcg
aagcttcagcaggagaaccaacgcctctccaacatgagcgatccctcgggaagccaagag
atgttcaaggagaccatccagaacctgtcccgcatcatcagggagaaggacatagagatc
gacgctttgacccagaagtgccagaccctggtgacggtcctgcagtcctcagcaggagag
tccggcggcggctccggaggcgtcagcagcaaccagttcgaggagctgctgcaggagagg
gacacactgaagcagcaggtgaagaagatggaggagtggaagcagcaggtgatcaccacg
gtcaagaacatgcagcacgagtcggctcagctgcaggaggagctgatcaaactgcagggc
caggtctccgccgacagcgactgcagctccaagctgtcggtggactacgccggactgatc
cagagctacgagcgcaaggagagcaggctgggaagtctgagtcaggaactcgcgcaggtc
cagcagaccatcacccagctcagcaccaccaaggacgtcctgctggttaagctggacagc
gtggcgcaggctcccgaggtcgcaggcgctccggctaccggagcctcgctcgccgccgct
ccagtcgaccagacgtctcagggtctgaaccacgagaaactccgggaagaaattgtccag
ttgcgaattgagttggctgagaaggaaaacgcaatcaagacccttcaggaaaacaaccac
cggctctccaacgcggcgtccgccacagagagcgagcagaggagtcaggccggggaggcc
cgtctggtccgagagaggctggaggccctgcagaggtccgttagggagaaggacctgctc
atcaagaccaaaggcgaccagctgagtcacgtcagcgagacgctgcgcaaccgagagagc
gacaacgaggtgctgaagcaggccgtgaccaacctgaaggagcgcgctctcattctggaa
atggacgggaagaagctgaaggaggagaacgagctggtggcgtcacgctctcgagagaag
gagtccgagttccgagcgctgcaggaaaccaacatgcaggtttccctcctgctccgggag
aaggagtttgagctgagtgcagtgagcgagaagtctgcgacagtagagaggatgctcaag
gacaaagagcagggaaagtcgggtgagctgaatcaactcctgaatgaactgaagtccatg
caggagaaagcttttgcgttccaacaggagagggatcagatgatgatggcactcaagcaa
aaacaaatggagaccactgcagtacacactgagctgcagcacgtgagggacaaagaacag
cgcctcaacctggagctggacaggttgcgtaatcaccttatggagattgaggactcgtac
acgagagaagccgtctccgctgaggacagggagacggagctacgcaggagggtggcgctg
ctggaggagaaactggccacatcctcgagtgccgtggagaatgccagccaacaggccagc
atgcaggtggagtctctgcaggagcagctgactggagtggtgaagcagagggacgagact
ctcatccgtctcaggacctcccaggagcaggtcaaccagtatgcagtgtcgctgtccaac
ctgcagatggtgctagagcagtttcaacaagaagagaaagccatgtactctgcagagctc
gacatgtacaagaaggagagggacgagtggaaaagaaaagcactgaggctggaggaccaa
gcatcggccttgcagattaacctcgatgaagccaacgctgctctggaatcagcttctcgc
ctcaccgatcagctcgatctaaacgaggagcaaattcaagagctgaaacatcaagtggaa
attagacaggagatgttggaggaggcacagaagaaactgatgaaccttctaaacagcacc
gaggggaagatagacaaagtcttgatgcgtaacctgttcttgggatacttccacacacct
aaaaccaagcgtgccgatgtgctgaggctcatgggaagtgttctgggactgagcagagaa
gatgttgacaaaatgttgggggaggacggagggcacggtgttaccggatgggtgtcgagc
tggctgggaggcagaggagcgcagagcgtcccaaacacgccgcagaggcccaccagcggc
caagggctgaactcgtccttctcagagatgtttgtaaagttcctggagatcgagtcgacg
ccttcgctgcccgcagccaagctcccagcccatgacatcaaggctctgggcgcgcctccc
ccgagacgaaccggcagtgccagcggcgccgcaggaggtgcggcgctcgccaagcgaccc
ggcgagtccaaccctttcctggcccctcgctctgccgccgttcccctggtggcgggctcc
agctctggcggctcaggaagtcacctgctgatgaagcccatctgcgaagccctgcccacc
ttcacacctgtgccggtctcatcggaggccagtgctggatccgtgctcaaggacttgttg
aagcagtga
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integrated database retrieval system
