Pungitius pungitius (ninespine stickleback): 119227511
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Entry
119227511 CDS
T07626
Name
(RefSeq) RNA-binding protein 25-like
KO
K12822
RNA-binding protein 25
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119227511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119227511
Spliceosome [BR:
ppug03041
]
Complex A
U1 snRNP components
U1 related factors
119227511
Complex B
119227511
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
TCTP
Motif
Other DBs
NCBI-GeneID:
119227511
NCBI-ProteinID:
XP_037342242
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All DBs
Position
14:13574103..13583466
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AA seq
879 aa
AA seq
DB search
MSYPPPLNRQQIGIPQLPPRIPPPQYAGFAPGVPPGTPMIPVHMGVVTPTTTVLVPTTVS
VTHKPMLPKKEPNVRAKDTDDCSGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQ
GASGKLQAFGFCEYKEPESTLRALRLLHELLLGDKKLLVKVDAKTKAQLDEWKAKRRSAN
GEASDGSKNGEDDDDEEEVVDEETLRRDQVVKGAIEVLIREYASELNAPSQDPDSQPRNK
KRKEKKEEEDINAMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEKERLEVERERRERD
KERERERERRDREKEKERERERDKERERDRDRDRDRERERDRERERTKERERERERERSR
DVSEGRSRSRERTREEKKRDREEDEEDVYERRRLERRLRDKEAAYQERLKNWEIRERKKA
RDYSKETEREDERRREMMKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKETELD
ERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEEEAERRRQPPLKLEPEEDVSQEKAHK
ERERERERERERERERERERERERERERERDRERERERDRERERDRDRERDRDRDREKRG
SGRPAEPMPRVPQQHSEDDEEDVGEEEDYRDGEDSQETKPPLKPIITIAPSVSSASGNAT
PNTPGNDSPCGIIIPGENTPEVQPLEEHRPKIGLSLKLGATNSPSQLSIGKRKKLPTGKS
VFNQFDHEEADEQPRKRKLVPLDYGDDDKSLGLDGAEMPGAKGSVNTEEKRKHIKSLIEK
IPTARPELFTYPLDWTMVDSTLMDRRIKPWINKKIIEYIGEEEATLVDFVCSKVMAHSTP
QGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccctcctccgctcaatcgccagcagattggcatcccgcagttacctcccagg
atcccacctcctcagtatgcgggattcgccccgggtgtcccgccaggtactccgatgatc
ccggttcatatgggtgtcgttacccctacaaccacagttctggtcccgacaacagtctct
gtaacacataagccgatgcttccaaagaaggagcccaacgtcagagcaaaggacacagac
gactgcagtggccccaccaccactgtttttgtggggaacatctctgaaaaagcatctgac
atgttagtcagacagcttctagcgaaatgtggtattgttcttagctggaaaagggttcaa
ggtgcctctgggaagcttcaagcttttggattctgtgagtacaaggagcctgaatccaca
ctacgggccctcagacttctgcacgagttgctcctgggtgataagaagctgctggtgaag
gtagatgccaagaccaaggcccagctcgacgagtggaaggcaaagaggcgcagtgccaat
ggggaggccagtgatgggtctaagaacggggaagacgacgacgatgaggaggaggttgtt
gatgaagagactctgcgtcgtgatcaggttgtgaagggcgcaatagaagtcctcatccga
gagtatgctagtgagctcaatgctccctcacaggaccctgacagtcaacctcgcaacaag
aagcggaaggagaagaaagaggaggaggatatcaatgccatggagatggaggatgacaag
agagacctgatttccagagagatcagtaaattccgggacacgcacaagaaacttgaggag
gaaaaaggcaagaaagaaaaggagcgactggaggtcgagagggagaggagagaaagggac
aaggagcgggagcgtgagagggaacgccgcgatcgcgagaaagagaaggagagggagaga
gagagagacaaggagcgggaaagagacagagacagagaccgggaccgcgagcgggagagg
gatcgggagcgggagaggacgaaggagcgagaaagggagcgtgaaagggagaggagtcga
gacgtcagtgaaggtcgaagcagatcgagagagaggactagagaagaaaaaaaacgagac
cgcgaggaagacgaggaggacgtttatgaacgaaggagactcgagaggaggcttagagac
aaggaggcggcctaccaagagcgcctgaaaaactgggagatccgtgagaggaagaaggct
cgtgactacagcaaagagactgagcgggaggatgagaggcgtcgggaaatgatgaaagaa
gccaaaaggctgaaagaattccttgaagattatgacgatgaccgagacgacccaaaatac
tacaggggcagcgctttgcagaagcggctccgtgaccgggaaaaggaaacggaattggac
gagcgcgaccggaagagggagaaggaggagctggaggagatcagacagaggcttctggct
gaaggtcaccctgaccccgatgccgagctgcagaggatggaggaggaggcagagcgcaga
cggcagcctcctctgaaactcgaacccgaagaggacgtgagccaggagaaggctcacaag
gaacgggaacgagaacgagagcgggaacgagagcgggaacgagagcgggaacgagagcgg
gaacgggaacgggagcgggaacgagaacgggatcgggaacgggaacgagaacgggatcga
gaacgagaacgggatcgtgatcgagaacgagaccgggaccgcgaccgggagaagagaggg
tcagggagacccgctgagccgatgcctcgggtcccccagcagcactcagaggatgacgag
gaggatgttggcgaggaggaagactaccgtgatggcgaggactcgcaagagaccaagccg
ccgctcaaacccatcatcaccattgccccatcagtgtcctccgccagtgggaacgcgact
ccaaacacacctggcaacgattctccctgcggcatcatcattcccggtgaaaacaccccc
gaggtccaacccctggaggagcatcggcccaagattggccttagtctcaaactgggtgcc
accaacagtcccagccagctcagcatcggaaagcggaagaagctgccgaccggaaaaagt
gtcttcaaccagttcgaccatgaggaggccgacgagcagcctcgcaagaggaaacttgtc
cctctggactatggcgatgacgacaagagcctggggctggatggggcagaaatgccaggg
gccaaaggtagcgtcaacacagaagagaaacgcaagcacataaagagccttatcgagaag
atccccacggccaggccggagctcttcacctatcctctggactggaccatggttgactcg
accctgatggatcgtcgcattaaaccatggataaataagaagattatagagtatatcggc
gaggaagaagctacactggttgattttgtctgttcaaaggtgatggcacatagcacccct
cagggtattcttgatgatgttgccatggttcttgacgaagaagcagaagtcttcatagta
aagatgtggaggctgttgatatatgaaactgaagcaaagaagatcggtctggtgaaataa
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