Pungitius pungitius (ninespine stickleback): 119227547
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Entry
119227547 CDS
T07626
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
ppug03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119227547 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
119227547 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119227547 (mnat1)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119227547 (mnat1)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119227547 (mnat1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119227547 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
zf-RING_2
zf-P11
TcdA1_RBD_2
Motif
Other DBs
NCBI-GeneID:
119227547
NCBI-ProteinID:
XP_037342303
LinkDB
All DBs
Position
14:7055715..7086694
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKREFDFPSLREYNDYLELVEDVVSNLTNNIDVENTKL
QMEQYQRDNRDLIQKNKVKLTREQEEVEELLLLEQQGNEQRRLELLQEEQRQLQAKRKNK
QALLDELEHSQLPATMLLAQHKVRAAKLETQIEQQKQAVKPASLFSTGINMRQTVSLQPP
PRIEEVLYQYKPVHVETYGPPVPELELLSRLGYLNHVRAAMPQDTAGGYTSALACHRAVQ
DAFSGLFPLKR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagggatgtccgagatgcaaaaccaccaaatacaggaatccttcgctgaag
ctgatggtgaacgtgtgcggacacacgctatgcgagaactgtgtggagatgctgtttgtg
cgcggctcgggtaactgcgtgcagtgtgacacgccgctgaggaagagcaacttccgcgtg
cagctcttcgaagacccgaccgtggataaggaggtggagattcgcaagaaggtgctgaag
atatacaacaagagagagtttgacttcccgagcctgagagagtacaacgactacctcgag
ctggtggaggacgtagtgtccaacctgacaaacaacatcgatgtggagaacacaaagctg
cagatggagcagtaccagagggataacagagatctcatccagaagaataaggttaaactg
acaagagagcaggaggaagtggaggagctgctgctgctggagcagcagggcaacgagcag
cggaggctggagctgctgcaggaggagcagaggcagctgcaggctaagaggaagaacaag
caggctctgctggatgaactggagcattctcaacttcctgccaccatgctgctcgcccaa
cacaaggtccgtgctgccaagctggagacccagatagagcagcagaaacaggccgtcaaa
cctgccagcctcttctcaactggaatcaatatgcgccagacggtgtctcttcagcctcct
ccccggatagaagaagtcttgtatcagtacaagcctgttcacgttgagacatacggaccc
ccagtaccggaactggagctgctgagcagactcgggtatctgaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcagctttggcgtgtcatcgagctgttcag
gatgctttcagtgggctgttccctctgaagcgctga
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