Pungitius pungitius (ninespine stickleback): 119227555
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Entry
119227555 CDS
T07626
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119227555 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119227555 (lrfn5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
Ig_3
I-set
LRR_4
ig
LRR_1
LRR_9
Ig_2
C2-set_2
fn3
LRR_14
C2-set_3
LRRCT
Ig_DSCAM-DSCAML_C
Ig_5
Motif
Other DBs
NCBI-GeneID:
119227555
NCBI-ProteinID:
XP_037342315
LinkDB
All DBs
Position
14:complement(13858229..13945054)
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AA seq
847 aa
AA seq
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MERLLLCVMLAVAMAVRAQNCPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISYITPQAFTDLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDTIPWEAIQRMISLHTLSLD
HNMLDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTSSSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQQLSGRYFWSITEEEFICEPPLITRYSHEMRVL
EGQRVTLRCKARGDPEPAIHWISPEGKLVSNSSRTLAYSNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTIDLLIIKLPHISNNTNNIQEPDPGSSDISTSTRGGVNGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRTVPGIRMFQIQYNGSQDDSLVYRMIPPSSKTFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGDGGKGVSLSMTNVHSQTNGQQSQGCSVTPSSSKHGAIGSD
DVSAGSKKRSGAAGGGGGGGVCKDSITQSSDSSLPDCSTTTSVLSQPWGDEERARAAVSS
PTAATGSLTKTKRKPGSSAAESLASPSPRPPSSSVSTASSALLPSTPLENLNTNRNNSTS
LNQSPSSFPPPTFSCSGASQSPSTSNRFRETPILRRAPRAGSSASAKYQTLPAEEAGRNR
ARRRYSLSEGGSKTHLSHKGAGGAPKIGRTVRNKRSQSMSGILLHKDGDGDSEKGRCDSD
WILESTV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctgtgtgtgatgctagcggttgccatggcggtgagggcgcaaaac
tgcccaaagcgctgcgtgtgtcagatcctgtcgcccaacctggcaaccctgtgcgccaag
aaaggtctcctgtttgtaccgccaaacattgacaggcacaccgtggagctgcgactggct
gacaacttcgtcacaagtgtgaagaggaaagatttcgcaaacatgacacggctggtggac
ctgacattatccaggaacaccatctcctacatcacacctcaggccttcaccgatttggag
aacctccgagctctacacctcaacagcaaccggctgacgaggataggcaacgatacgttc
agcgggatgtcgaagctgcaccacctgattctgaacaacaaccagttggtgctgatccac
cagggagcgttcaacgacctgctggcactggaagaattggacctgagttacaataacctg
gacactattccttgggaggccatccagagaatgattagcctccacacgctgagtttagat
cacaacatgttggactatattccagaggggacgttttccctgctacagaaactcaaccgg
ctggacgtcacctctaataaactccaaaagctgccaccggaccctctttttcaacgagca
caggtcctggccacgtcaggcatcatgacctcctcctcatttgccctgtccttcggtggg
aaccctctccactgtaactgcgagttactgtggctgcggagactgaacagggaggacgac
ctggagacgtgtgcgtccccccagcagctctctggccgatacttctggtccatcactgag
gaggagttcatctgcgaacccccactcatcaccagatactcccatgagatgagggtgctt
gaagggcagagagttacgctcaggtgtaaggcgagaggtgacccagagccagccatccac
tggatctctcctgagggcaaactggtgtctaactcctccagaacattggcctactccaac
ggtaccctggacatcctcatcagtacagtcaaagacacgggctccttcacttgcatctcc
tccaaccctgcgggcgaagcccaccaaacaatagacctgctcatcataaaactcccccac
atctccaacaacaccaacaacatccaggagcccgacccggggtcgtcggacatttccact
tcgacccgaggcggagtcaacgggagcaacgtgacgggtgacgtgaaaggcggagtggac
aagagggtggtgacggccgaggccacgtcctcaacggcgctgataaagttcaacttccag
aggactgttccaggcatcaggatgttccagattcagtacaacgggagccaagatgactct
ctggtctacagaatgatcccgccatccagcaagacttttctggtcaacaacctcgcagcg
gggacccagtacgacctttgcgttctggccatctacgatgacgtcatcacctctctgaca
gcgacgcgagtcgttggctgtgtgcagttcaccaccgagtcggagtacatgaggtgtcat
ttcatgcagtctcagttcctcggcgggacgatgatcatcatcatcggcgggataatagta
gcttcggtgctggttttcatcatcatcctaatgatacggtacaaggtctgtaaccccggc
gatggtgggaaaggcgtctcactgtcgatgaccaacgttcactcacagaccaatgggcag
cagtcgcagggctgcagcgtgactcccagctcctctaaacacggcgccattggatcagac
gacgtctccgcgggctcaaagaaaaggagcggggcggcaggaggaggaggaggtggggga
gtgtgcaaggattcgataactcagtcgtccgactcgtccctgcctgactgctccacgacc
acgtcggtcctcagccagccgtggggagacgaggagagagctcgagccgccgtttcgtcg
cccaccgccgccaccggctccctgaccaagacaaagaggaagcccggctcgtccgccgct
gaaagcctcgcctcgccctcccctcggcctccttcctcctccgtatccacggcctcctct
gctctcctgccctcaacccctctggagaacctcaacaccaaccgcaacaactccacctcg
cttaaccaaagcccatcttccttcccccctcccactttctcctgctccggggcctcccag
agcccctccacctccaaccgatttagagagacccctatcctgcgccgggctccccgcgcc
ggctcctcggcctccgccaagtaccagactctccccgcggaggaggcagggaggaacagg
gcgaggaggaggtactccctcagtgaaggaggctcaaagacccacttgtcccataagggg
gccgggggagcacccaaaatagggcgcaccgtgcggaacaaaaggagccaatccatgagc
gggattctgctccacaaagacggggatggagactcagaaaaagggcgctgcgattcggat
tggatcttagaaagcacggtttga
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