KEGG   Pungitius pungitius (ninespine stickleback): 119227611
Entry
119227611         CDS       T07626                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppug03019]
    119227611 (larp1b)
Messenger RNA biogenesis [BR:ppug03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119227611 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La Phage_XkdX
Other DBs
NCBI-GeneID: 119227611
NCBI-ProteinID: XP_037342436
LinkDB
Position
14:complement(2999753..3014261)
AA seq 1070 aa
MSTEVERSQLGSGLTAEEQPKNQNKSDGPRDPEEKPQRGSDRQDDHHHRGSEESKSPADT
HKNRKENDKENDQSGNAADASPAAEVVKRQVVEAPPPKVNPWTKRTTGRVPGGTTTTTTT
ISSSSPGPQEKDQQNTLKVVRASKPRTRKSSKSGDFSDITNWPTPGELAKEQQQNVLNNT
GKKPPAARRDKEPSGHDGEESKENQEALPGTPGESPKDGGESKAGQQDAKSAGLKKRGGE
GNKRKWVSLPMEEASRDDGEKAPCGGPPGAASTGDSADPASPNHALPSNRAHDGSRSWRR
EPRDFGDDGAGLRGGARGRGKGRGRGRGRGRGRYENSQGFRDFQSDGSAQGSSEFGSNMV
YYYDDGSKVQMYSVDEKLLKEYIKRQIEYYFSLHNLERDFFLRRKMDVQGFLPVSLIASF
HRVQALTMDVSLILEALKSSKEVEVVDNKVRCKTDPERWPIPAPLVVGSPRTDFSQLINC
PEFVPRQSLSSSNSASSPEKKTPPESDEPEDSAGPSSSSQESPPARDAPPPPDAEVWIQV
EKRHRQPAAKERSDASTRGPQPPHQALPDQEELDFLFDEEMEQMAPRKNRFTDWSDDDDD
SDYELDDQDVNKILIVTQTPPSLRKHPGGDRTGNHESRAKLTTDLAKAINDGLFYYEQDL
WKGEETVEVTKQEVENFKKINIISQDEFETLTPKVSVDLKQEATPPLTPGVLSVDSGAEL
ARSLPTTVPESPVSQTPRTPRTPRTPGRQDPSKTPRFYPVMKESGTIDGQTPRKKKTRHS
SNPPQEAHIGWVMDSREHRPRSSSISSSNASPSEGAPLSGSYGCTPHSLPKFWHPSHDLL
RDNGFTQQGYHKYLRRCLNERKRSGIGQSQEMNTLFRFWSFFLRDNFNRKMYEEFKLRAL
EDAKENYRYGLECLFRYYSYGLEKRFRLDLFKDFQEETLKDFERGQLYGLEKFWAFLKYS
KMKKQPIDPKLQEHLSQFKNLEDFRVVPPMGEEGGRRRRHSSSAGDEGRRRRHPSNTTSK
PAQAPKPSAASGAQAAPKDHAQKTAAAAVASKGKKAETGAAKKESVAPNK
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgtccactgaggtcgagcggagtcagctcggctcgggtttgacagcggaggagcagccg
aagaaccaaaacaagtctgacgggcctcgcgatcccgaagagaagccacagaggggctcc
gacaggcaggacgaccaccaccaccgcggctccgaggagtcgaagagcccggcggacacg
cacaagaaccgcaaggagaacgacaaggagaacgaccagagcggcaacgccgccgacgcg
tccccggccgcggaggtggtgaagcggcaagtggtcgaggctcctccgccgaaagtcaac
ccgtggacgaagaggacgacgggcagggtgccggggggcaccaccaccaccaccaccacc
atcagcagcagcagccccgggccgcaggagaaagatcaacaaaacaccctgaaagttgtt
cgtgccagcaaacccagaacgagaaaatccagcaagtcaggagacttcagtgacatcaca
aactggcccacacccggggagctcgccaaagagcagcagcaaaacgtgctcaacaacacg
gggaagaagccgcccgccgcgcgccgggacaaggagccgagcggccatgacggcgaagag
agcaaagagaaccaggaggctctgcccggcacgccgggggagtcgcccaaagacggcggg
gagtccaaggcgggacagcaggacgccaagagcgccggcctgaagaagagggggggcgaa
ggtaacaaacgtaagtgggtttctctgccgatggaggaggcgtcccgggacgacggcgag
aaggcgccctgcgggggtcctccaggtgcggcgtccaccggcgactcggccgaccccgcg
tcgcccaatcacgcgctgcctagtaacagggcgcatgacggcagcaggagttggagaaga
gagccgcgggactttggggacgacggcgcgggcctccgcggaggtgcgcggggccgcggg
aaaggtcgcggccgcggcagaggtcgcgggcgaggccgctacgagaactctcagggcttc
cgggacttccagtccgacggctctgctcagggctcctcggagtttggctccaacatggtt
tactactacgacgacggcagcaaggtgcagatgtactcggtggacgaaaagctgctgaag
gaatacatcaaacggcaaatagaatactacttcagcctccacaacctggagagagacttc
ttcctcaggaggaagatggacgttcagggcttcctccccgtctccctcatcgccagcttc
caccgcgtccaggccctcaccatggacgtcagcctcatcctcgaggcgctgaagagcagc
aaggaggtggaggtggtggacaacaaggtccgctgtaaaaccgacccggagcgctggccc
atccccgccccgctcgtggtgggatccccccggaccgacttctcccagctcatcaactgc
cccgagttcgtcccccgacagagtctcagctcctccaactctgcttcgtctcccgagaag
aagaccccccccgagtccgacgagcccgaggactccgccggtcccagctcctccagccag
gagtcgccgccggccagggacgccccccccccgcccgacgccgaggtctggatccaggtg
gagaaacgccaccgacagcccgccgccaaggagcgcagcgacgcttccacgcgaggcccc
cagccgcctcaccaggccctccccgaccaggaggagctggacttcctgttcgacgaggag
atggagcagatggcgccgcggaagaaccgcttcaccgactggtcggacgacgacgacgac
tcggactacgagctggacgaccaggacgtcaacaagatcctcatcgtcacgcagaccccg
ccctctctgcgcaagcaccccggcggcgaccggaccggcaaccacgagtcgcgcgccaag
ctgaccaccgacctcgccaaagccatcaacgacgggctgttctactacgagcaggacctg
tggaagggggaggagaccgtggaggtcaccaagcaggaagtggagaactttaagaagata
aacatcatcagtcaagacgagtttgaaactctgacccccaaagtgtctgttgacctgaaa
caggaagccacgcctcctctcacgccaggtgtgctctcagtggacagcggagcagagttg
gctcgctcgctgcccacaacggtcccggagtcgcccgtctcacagacgcctcggaccccc
cggacgccgcgcaccccgggacgccaggaccccagcaagacgccgcgcttctaccccgtc
atgaaggagagcggcaccatcgacggacagacgccgaggaagaagaagacccgccacagt
tcaaaccctccccaggaggcccacatcggctgggtgatggactccagagagcaccgcccg
cgctcctcgtccatcagcagctccaacgcctccccctcagaaggagctccgctctcgggg
agttacggctgcaccccccactcgctgcccaaattctggcacccctcccacgacctgctg
agggacaacggcttcacccagcagggctaccacaagtacctgcggcgctgcctcaacgag
aggaagcggtcaggcatcggccagtcgcaggagatgaacactctgttcaggttctggtcc
ttcttcctgagggacaacttcaacaggaagatgtacgaggagttcaaactgcgtgcgctg
gaagacgccaaagaaaactacaggtacggcctggaatgtctcttcagatactacagttac
ggtttggagaagagattcaggttggatctgttcaaggactttcaagaggagacgctcaag
gactttgagagaggtcagctgtatggacttgagaagttctgggccttcctgaaatactcg
aagatgaagaagcagccgatcgacccgaagctgcaggaacacctctcccagttcaagaac
ctggaggacttcagggtggtgccccccatgggagaggagggcggcaggaggagacgtcac
tcatcctcggccggggatgaaggccggcgtcggcgacatccttccaacactacctcaaag
cccgcgcaggcccccaagccctccgccgccagcggcgcccaggccgcgcccaaagaccac
gcccagaaaaccgccgccgccgccgtcgccagcaaggggaagaaggccgagaccggcgcc
gcaaagaaggagagtgtcgcgcccaacaaatga

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