Pungitius pungitius (ninespine stickleback): 119227632
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Entry
119227632 CDS
T07626
Symbol
syne3
Name
(RefSeq) nesprin-3
KO
K21761
nesprin-3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119227632 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119227632 (syne3)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
119227632 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KASH
Spectrin_SYNE1_2
SYNE3
Spectrin
Spectrin_SYNE1
SR_desmoplakin_3
Motif
Other DBs
NCBI-GeneID:
119227632
NCBI-ProteinID:
XP_037342496
LinkDB
All DBs
Position
14:complement(16351407..16376783)
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AA seq
1119 aa
AA seq
DB search
MTQQEQQEFTESLEAALSWMRAIQERLKANDNTHGPLDALEGRLRETEKIHQSAHEGRVK
MDMALVAADNLLQNGDDEVRNHTHAKLKDLKNLWEETSTYIIHCHSRIEWVWLHWGEYLK
AYGEFELWLMSRQRSLDVVVELQLGAKEKLWQVDQQRVVVSDIHGQAALLERLLDEAAAL
HNRTQDPSVDPQAQERMQEAYNDIRDRAEERLSLLQRMAEEHQTYQGCVQRFQSWLRSKN
KELTDLMDREDTAENKLKALQALDDSIAGEEKTLQHIEGVAEAVRGNTSPSGAEVVMEEA
EDLRLGWQRLRQRLFESEEGLRSSLDSHSQYVARCQRLGEDIGQLRVLLQGLDLELEEGR
EGRGNTDRTEEEMVGQWKKYTGVRNTLAGEESQVELLKAQLKELFRFSEDSRHLSDDVLA
VVKEHQSVKCRATRLCSESESGLRSVLQDPLLVYTHWAHMVSQLLEASAEVTDFSHSDML
VQSIEHLLMASIQLQERLSLLQVKGHLLDSVFGPEGSDNLQGELEAAVRNRELMHAQLLQ
RKSRLQGLISRSKDFGDAHESICSRLAALQDQLVAADGLQPDILAKKSQSDQFRVILKDL
EDCEAPITALETLVSSSQSNQTQYERLHAEWKHLHMAARVKVHDSEESISAHESFHDSLL
NLEKWLMIMKQRLESFHSPPAEWSVEGRQHEAERALGEFPEKELQLQQMEVQGKGVLERT
SEEGRVHILRDIRRLQESWFALSDTSLNLHRLLDRSTEQTQSVSWGDAGLSRTTELCVGE
GGGQGGASRGQLGGKPAGMYGAMVGFGSGGGGSLEGEAGQGTATGERGRIQGHGGGHLCL
DEQDAIAEDGLRSFKGDHVDSSTWRICSRAGQRGSTGSPDSDTSPGGGSSILAGNREATS
LSSRVGAEAGDGLSPGGGAFMLYRREPTQHQPGGTAEYKSRRREFEAWLSQENELLSGVC
SSQGTTLSAKELRSQQGTLKALRAAVGRGQEQFQLLLQERPASDAGAEPAEDVSLEELRY
RWMLYKSKLKDVGELRSRAKTKRIQAEPEEPASTAKVQKKAGLCQRVCRLALPLWLLLLA
LLLLAFLLPLMDEGNSCSLSNNFARSFNIMLRYEGPPPT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcaggagcagcaggagttcacggagagcctggaagcggccctttcctggatg
cgggccatccaggagagactgaaggccaatgacaacacccatggacctctggatgccctg
gagggccgactcagggagacagagaagattcatcaatcggcgcatgagggtcgtgtgaag
atggatatggcgctggtggcagctgataaccttttgcaaaacggagacgacgaagtgagg
aaccacacccatgctaagcttaaagacctgaagaacctgtgggaggagaccagcacctac
atcatccactgtcacagtcgcatagagtgggtgtggctccactggggcgagtacctgaag
gcctacggggagtttgagttgtggctgatgagccggcagcgcagcctcgatgttgtggtg
gagctgcagctgggggcaaaggagaagctctggcaggtggaccagcagagggtggtggtg
agcgacatccacggccaggcagcacttctggagaggctgctggacgaggccgccgccctg
cacaacagaacccaggaccccagtgtggatccccaggcccaggagcgcatgcaggaggcc
tacaacgatatcagagacagagctgaggagcgtctgtcgctgctccagaggatggcggag
gagcaccagacgtaccaaggctgcgttcagaggttccagtcgtggctgcggtcgaaaaac
aaggagctcactgatctcatggacagggaggatactgctgagaacaagctcaaagcctta
caagctctggacgacagcatagccggcgaggaaaagaccctgcagcacatcgagggagtg
gcggaggcggtgaggggcaacacctctccctctggggcggaggtggtgatggaggaggca
gaggacctgaggctgggctggcagaggctgaggcagcgcctgtttgagtctgaggagggc
ctgcgctccagccttgactcccacagtcagtacgtggccaggtgccagcggctgggagag
gacatcggccagctcagggtgctgctgcaggggctggacctggaactggaggagggccgc
gaggggaggggcaacactgacaggaccgaggaggagatggtggggcagtggaaaaaatac
acgggtgtgaggaatactctggcaggcgaggagtcccaagtggaactactcaaggctcag
ctcaaggagctcttcaggttctcagaggactcgcgtcacctttctgatgacgtcctagct
gttgttaaagaacatcagagtgtgaagtgcagagcgacgaggctgtgttcagagtcggag
tcggggctgaggagcgttctccaggacccgttgctggtctacacacactgggcccacatg
gtctctcagcttctggaggcctccgctgaggtcactgacttctcccacagcgacatgctg
gtacagagcatcgagcatctgctgatggccagcatccagctgcaagagcgcctcagcttg
ctgcaggtgaagggccacctgctggactcggttttcggccccgaggggtccgacaacctg
cagggagagctggaggccgccgtcaggaacagagagctgatgcacgctcagctgctgcag
aggaagagcaggctgcagggcttaatctcaagaagtaaggactttggcgacgcccatgag
tcgatttgctccaggctggcggctctgcaggaccagctggtagcagccgacggcctgcag
cctgatatcctggccaagaagagccagtcagaccagttcagggtgatcctgaaggacctg
gaggactgtgaggcccccatcacagcgctggagactctggtctcgtccagtcagagcaac
cagactcagtacgagaggctccatgccgagtggaaacacctgcacatggccgccagggtg
aaggtgcacgacagcgaggagagcatctcggcccatgagagcttccacgacagcttgctg
aacctggagaagtggctgatgatcatgaagcagaggctggagtccttccacagcccccca
gcagagtggagcgtggagggccgtcagcatgaagctgagagagcactaggagagttccct
gagaaggaactccagctgcagcagatggaggtccagggtaagggcgttttggagaggacc
tcagaggagggacgggtccacattctgcgagacattcgccgcctccaagagtcctggttc
gctctgtccgataccagcctcaatcttcacaggctgctggaccgctccacagagcagaca
cagtccgtctcatggggggatgcaggcctgtcccggaccacagagctctgtgtaggggag
ggaggtggtcagggcggggcctcgagaggccaactaggaggcaagcctgctggcatgtat
ggcgccatggtcggctttggatctggaggaggaggaagcctagagggagaggcgggacag
gggacagcgactggagagcgcggtcggatccagggccacggcggaggtcatctctgcctg
gacgaacaagacgcgatagccgaggacggcctgcgctcctttaaaggagaccacgtggac
tcctccacttggagaatttgcagcagagcaggccagagaggctccactggaagccctgac
agtgacacatcaccggggggcggcagcagcatcctagcaggaaacagagaggcaacgtcg
ctatcctcaagggtcggcgcggaggcaggggacggcctgagcccgggaggaggagccttc
atgctgtacagaagggagcccactcagcaccaaccggggggcacggcagagtacaagtcg
aggaggagggagtttgaggcctggctgtcacaagagaatgagctgctctcaggggtctgc
agcagccagggaacaacactcagtgccaaagaactcaggagccagcagggaaccctcaag
gctctgagggccgcagtgggacggggccaggagcagttccagctgttactccaggagaga
ccggccagtgacgctggtgctgaaccagcagaagatgtgagtctggaggagctccgctac
cgctggatgctctacaagtccaaactgaaggacgtgggggagctcaggtccagggccaag
accaagagaatccaagccgaaccagaggagccggcctccacagctaaagtgcaaaagaag
gccggcctgtgtcagcgcgtgtgtcgcctggctcttcctctgtggctcctcctcctggcg
ctgctgctcctggccttcctgctgcccctcatggacgaaggcaacagttgctccctctcc
aacaactttgcccgttccttcaacatcatgctccgttatgaaggaccgccccccacataa
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integrated database retrieval system
