Pungitius pungitius (ninespine stickleback): 119227778
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Entry
119227778 CDS
T07626
Symbol
psen1
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04310
Wnt signaling pathway
ppug04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119227778 (psen1)
04330 Notch signaling pathway
119227778 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119227778 (psen1)
Peptidases and inhibitors [BR:
ppug01002
]
Aspartic peptidases
Family A22: presenilin family
119227778 (psen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF3377
Motif
Other DBs
NCBI-GeneID:
119227778
NCBI-ProteinID:
XP_037342757
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Position
14:complement(3427767..3434466)
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AA seq
489 aa
AA seq
DB search
MANHVEDIENNMDEQEPNVASEPSQQPQEAAGTRVRSRGVSGAAGGAAGGGGGDDDLGGG
NGGSPEQNGQLRAARPPRVVETDEDEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSV
SFFTQKDGQRLIYTPFSEDTDTVGQRAVNSILNASIMITVIIVMTLVLVLLYKYRFYKVI
QGWLFLASLLMLFSFSFIYLKEVFKTYNLATDYFTVAIIIWNFGVVGMLCIHWTGPLRLQ
QAYLIMISALMALVFVKYLPEWTGWLILGAISVYDLLAVLCPKGPLRILVETAQERNEPI
FPALIYSSTMVWLVNMADTEWPPKRNSTDAAPPQQEAPDAAGSPPPSSPSGDDGGFSSSW
VDQQQHQLGPLQSTDQTRREVQELPSARPPVDDDDEEERGVKLGLGDFIFYSMLVGKASA
TASGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVQPFMD
RLALHQFYI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccatgtagaagatatagaaaacaatatggacgagcaggagcccaatgtggcc
tctgaacccagccagcagccacaggaggccgcggggaccagagtccgctccagaggagtc
tcaggagctgcaggaggagctgcaggaggaggaggaggagatgatgatttaggaggaggc
aatggtggcagcccggagcagaacggacagctccgcgctgcccggcctccgcgagtggtg
gagacggacgaggacgaggacgaagagttgaccttgaaatacggggcgaagcacgtcatc
atgctgttcgttcccgtgaccctgtgcatggtggttgtcgtggcaaccataaagtccgtc
agcttctttacccagaaggacggccagagattgatctacaccccgttctccgaggacacg
gacacagtgggacagagagccgtcaactccatcctgaacgcctccatcatgatcaccgtg
atcatcgtcatgactctggtgctggtgctgttgtacaagtaccgcttctacaaggtcatc
caaggctggctcttcctcgcctctctcctcatgctgttcagcttctccttcatctacctc
aaagaggttttcaagacctacaacttggccacggactacttcaccgtggccataataatt
tggaacttcggagtggtgggcatgttgtgcatccactggaccgggccgctgcggctccag
caggcctacctcatcatgatcagcgccctcatggccctggttttcgtcaagtacctgccg
gagtggaccggctggctcatattaggcgccatatccgtctacgatctgttggcggtgctc
tgccccaaagggcccctgaggatcctggtggagacggcccaggagaggaacgagcccatc
ttccccgctctcatctactcgtctacgatggtgtggctcgtcaacatggccgacaccgag
tggccgccgaagaggaactccacggacgctgcgccgcctcaacaagaagctccagatgcc
gcggggtccccgcccccctccagcccctcgggcgatgacggaggcttcagctcctcgtgg
gtggaccagcagcagcaccagctggggccgctccagtccaccgaccagacccggcgggag
gtccaggagctgccctccgcccgcccccccgtcgacgacgacgacgaggaggagaggggc
gtcaagctgggcctcggggacttcatcttctacagcatgctggtgggaaaggcctcggcc
acggccagcggcgactggaacaccacgctcgcctgcttcgtggccatcctcatcggcctg
tgtctgaccctgctcctcctcgccatcttcaagaaagcgctccccgctctgcccatctcc
attttcttcggcctggtgttctacttcgccacagacaacttggtgcagcccttcatggac
cggctggcgctacaccagttctacatttag
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