Pungitius pungitius (ninespine stickleback): 119227787
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Entry
119227787 CDS
T07626
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119227787 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119227787 (mlh3)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119227787 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
119227787
NCBI-ProteinID:
XP_037342778
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Position
14:complement(6059283..6065918)
Genome browser
AA seq
1207 aa
AA seq
DB search
MIKCLPEDVQGKLRSGVAIPSLQQCIEELILNSLDAEATCVGVRMDMEAFKVQVVDNGAG
INAEDMECVGNRYHTSKCGTAEDLDNLRWYGFRGEALASVASLATLVEISTRTRSSVRTH
VKIFKDGKAMGVFEAETARPSSGTTVVICNFLRNMPVRRKRMDAVLEGERIRHRVEAVSL
MHPSVSFTLKNDCTGAMMVQLPKVTDTYHRYAQIHGLGRAQKLGDIRSTRGPFEVTGHVG
REGHYSNSLQFLYVNDRLLLRTRLHKLLNFLLRRLSSSNQKGDSPDGHSTTRSPKHKRSQ
ELHAVYVINIKCPYSEYDICLEPAKTLIEFRDWDGILLCMEEAVKAFLSKEGLVAVLRQD
DVGGDAPNMSCARVTDQGAHSTGNGGPDPHRASSVDCAFGMKLASDAVYRKRKDGRVRED
DVSEECGQTEGQEETEEPERQKRTEKEEEEINNEESLNKTNRYELLYDDAGLKQPSDNTI
PVEEKRSFIGAGENPPLSSVSNSVRQLESEKLETSKENEILWSTSTSSISVIPLESIYQQ
TQPDSSKVEQIVPDCQGAGGHEHTLISNRRISLCDPFIHENLLTQDLAPINKSVLQQQVS
AAKTEERSFASKRKISLYAGRGGTCQKPSEEVIPKKILRVSAGQKLPQCKESGSLEKFRR
ICGPAGELKSLSQEEDTRFPQIQRSHNVSVCQKDHRSGGVPKPETRSDLRRPPTSSALAD
SKPVSGQDRAKLSLAAKLSHLTQHRTERPNVSAHPPRATSQDGTCCRGDGDINNNDEDRR
DVLGRCEGPRLAEGEEEDTASGDWLHHYDASVGKTVYVNRATGLSRYEGPPAEGSRARCT
SDVTNMAVSVISEAGLEYRCYPFQVKLVLPFLPKSRAERVVSSGLDDRGAPHTDHILDDV
ERANSLKSMYSKWNNPVFVCPSKVGVDVSSGRADGLAVKIHNILFPYRFSKAMIHSMKVI
HQVDKKFLACLIDTRDEESAALAESEGNLLVLVDQHAAHERVRLENLLADSYEEDPEAPG
ERRLCSSTILPPLEISVTEEEQRLLRSCEAHLRSLGLEVKFSAAAKPQALVGKVPLCFME
KESNELRRGRPSVIKTVVKEYLQEQIELLRSTGRVRGTLPLTVLKVLASLACHGAIKFND
SLSRDECCSLVASLSSCQLPFQCAHGRPSIAPLVDTLHLDSDEKELQKPNLQRLRRMYKS
WKLHGNG
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatgtttgcccgaagacgtgcaggggaaacttcgctccggcgtcgctattccc
tcactccaacagtgcatagaggagctcatcctcaacagcctggatgccgaggccacctgc
gtgggggtcaggatggacatggaggcgttcaaagttcaggtcgtcgacaacggtgccggc
attaatgccgaggacatggagtgcgtgggaaaccggtaccacacgagcaagtgcggcacc
gccgaagacctggacaacctccggtggtacggtttcaggggagaagccctggcaagtgtg
gcgtcgctagccacgctggttgagatctccacgcggaccagatcgtcggtgagaactcac
gtcaaaatcttcaaggacggcaaggccatgggtgtgtttgaagcagagactgccaggccg
tcttccggcacaaccgtggtcatttgcaacttcctccgcaacatgccggtccggaggaag
aggatggacgccgtgctggagggcgagcggatcagacaccgagtggaggccgtctcgctg
atgcacccctctgtgtctttcaccttgaagaacgactgcacaggagccatgatggtgcag
ctccccaaagtcacagacacctaccacaggtatgcccagatacacggcctcgggcgggca
cagaaactcggagacatccggagcacccgcggaccgtttgaagtgacgggtcacgtgggc
agagaaggccactacagcaacagcctgcagttcctgtatgtgaatgaccgactgctcctg
aggacgcggctacacaagctcctgaactttctcctccgcagactgagcagctcgaatcag
aagggcgacagtccggacgggcattccaccaccaggagcccaaagcacaagcgaagccaa
gaactgcacgcggtgtacgtcatcaacatcaaatgcccttactcggagtacgacatatgc
cttgagcctgccaaaactctaatagagttcagagattgggacgggattttgctatgcatg
gaagaggccgttaaagctttcttgagcaaggagggcctggtggctgtgcttcgtcaggat
gacgtgggcggcgacgctccaaatatgtcatgtgctcgtgtgacagaccaaggggcacac
agcacgggcaacggtggtccagacccccacagagcttcctctgtagattgtgcttttggc
atgaaactggcatctgatgctgtttatcgaaagcgcaaggatggccgcgtgcgtgaggac
gacgttagcgaggagtgtggtcagaccgagggccaggaagagactgaagaaccagagagg
caaaagagaactgaaaaagaggaggaggagataaataatgaagaaagtttaaacaaaacg
aatagatatgagctgctgtatgatgatgctgggctcaaacaaccctctgataatacaatt
ccagtggaagagaagagaagctttattggagctggggaaaaccctccattgtcgtctgtg
tcgaattcagtcagacaactagaaagtgaaaaactggaaacctcaaaggaaaacgagata
ttgtggagcacaagtacctcaagcatcagtgtgattccactagaaagcatctatcaacaa
actcaacccgattcaagcaaagttgagcaaatagtacccgactgccagggtgctggaggg
catgaacacactttaatcagtaaccgaaggatcagcctgtgtgatcctttcattcatgaa
aatctgctgactcaggacctggccccaatcaacaagtcggtactgcagcaacaggtttca
gcggcgaaaaccgaagagagatcctttgcatcaaaacgcaaaatctccctgtacgcgggc
cgtggcggaacctgtcagaaaccatcggaagaagttattcccaaaaagattctccgggtc
tctgctggtcaaaagttgcctcaatgtaaggagtctggatcccttgagaagtttagaaga
atttgtggtccagctggtgaactgaaatctctctctcaagaggaggataccagatttccc
caaattcagcgttcacacaatgtgtctgtgtgccagaaggaccatcggagcggcggcgtt
cccaaaccggagacgcggagcgacctgcggcgcccgccgacctcctcggccctcgccgac
tcaaaacccgtctccgggcaggatagagctaagttgtctttggcggctaaactttcccac
ttgacacaacacaggacagagaggccaaacgtttcagcacacccgccgcgggcgacctcc
caggatggtacctgttgccgtggtgacggcgacatcaacaacaacgacgaggaccgccgc
gacgtcctcggccggtgtgaaggccctcgactggccgagggggaggaggaggacacggcg
tcgggcgactggcttcatcactacgatgcaagcgtcggaaagacggtttacgtcaacaga
gcgaccgggctcagccggtacgaagggccgcctgccgaaggaagccgggcgcgctgcacc
tcggatgtcaccaacatggcggtcagcgtcatctctgaagcggggctggaatacagatgt
tacccatttcaggtgaagctagtgttgcccttcctccctaaatccagggcagaaagagtg
gttagctcagggcttgatgacagaggtgccccacacacagatcacatcctggatgacgtc
gagagggccaactcgctgaagtcgatgtactcaaaatggaataatcctgtttttgtctgc
ccttctaaggtcggcgtggacgtctccagtgggcgagccgacggactcgctgtcaagatc
cacaacatcctgtttccgtaccgtttctctaaggccatgattcattcaatgaaggttatt
catcaggtggataagaaatttcttgcgtgtcttattgatacgagggatgaggagtctgca
gcactcgctgaatctgaaggaaacctcctggtgctggtagaccaacacgctgcgcacgaa
agagttcgactcgaaaatctactcgcagattcttatgaggaggacccagaggcgcctggg
gagagacgtctgtgttcatccaccattttgccgcctctcgagatcagcgtaacggaggaa
gagcaaaggctgctgaggtcttgtgaagcacatttgcgtagtttgggcctggaagtgaag
ttctcggcggcagcgaaaccacaagctctcgtgggaaaggtaccgctgtgcttcatggaa
aaggaaagtaatgagctcaggcggggccgaccgtccgtaatcaagactgttgttaaggaa
tatcttcaagagcagattgagttgcttcgctcaactgggagagtgagaggaactctgcct
ctcactgtgctgaaggtgctagcctcgttagcatgccacggtgccatcaaattcaatgac
tccctgagtagagacgaatgctgcagcttggtggcttccttgtcctcctgtcagttgccc
ttccagtgtgcccatggccgaccatccattgctcccttagtagacaccctccatttggac
agcgacgagaaggaattacagaaacccaaccttcaaaggctcagaagaatgtataaatca
tggaaactccatggaaatggataa
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