Pungitius pungitius (ninespine stickleback): 119227789
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Entry
119227789 CDS
T07626
Name
(RefSeq) transforming acidic coiled-coil-containing protein 3-like
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119227789
03036 Chromosome and associated proteins [BR:
ppug03036
]
119227789
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119227789
mRNA cycle factors
P-body specific factors
119227789
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
119227789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TACC_C
Aurora-A_bind_TACC3
Il13Ra_Ig
Motif
Other DBs
NCBI-GeneID:
119227789
NCBI-ProteinID:
XP_037342781
LinkDB
All DBs
Position
14:complement(6908955..6916670)
Genome browser
AA seq
1199 aa
AA seq
DB search
MSSVDVNDENRGVCPGGKHNSSINDIFALDQPTGRPSILRQTENLPSKTVPKGTKVAFQT
PRRDPVTKRIVSPSKSLKMASVDERTKGTESLNFDKINTLPKEATEQPEPKQEVSSYPDD
DMPIQSKGGYQFDFDNLDSINPFLSSVTTVLSPARPFLENPPEPENNWEEPAKMETALDE
TLPFTQSVESSLVDVSADISSRDSSVVTVAKVHRVEEQDSCTATPDDKQPERVSSNVHQD
KEPGSFLEDAPLTSDGAYTFDFDNLDTINPFQTGGSKIPNSPVPERTVPHGHPPVEETQK
KETEPTDVVDGPELAQATLELVDFSTDCSVVTEGAAPGDEVRDSCTAAPGETRPAQMSPT
VHQDKVSGSFVEDAPLLVKGAYRVDFDNLDAVDPFQTGGSKIPNSPVPERTVPHGHPPVE
ETQKKETEPTDVVDGPELAQATLELVDFSTDGSVVTEGTAPGDEVRDSCTTAPGETRPAQ
TSPTVRQDKDSPLLVKGAYAVDFDNLDAVDPFQTGGSKIPNSPVLERKVPNAHPPVETQK
KEAEPTVAEAPALPQAAPQPIDFPSDGSAVVEGTAPADEVRGVCTATPEEREPAKMSPAV
HQDKASGSFVEEAPLPAKGAYTVDFDNLDAVDPFHTGRSKIQNSPVRTAPGVSPHDEEAQ
IKQNQPTGVVIPGVTQEGPILPVKEPAVAPPADAPIKEGAVKLEFNFDDGREVKRRPPPK
KFGKRPAGVKPVEGKPACDAKPPKGSPARPDAAGVPVPTASYSFDFDKLDEPNYNPFGTK
ASVNDSSMCGKKSGPVLMEASIPEQADRPVQKDAVSSACAAESVQPERAGRQTAEYADTK
TPSQQDSGFLLEAERPSQSLPGVELCQPEQKSHTAMSEFNNEFVPGNLFMANDLDGQIDY
LEQFGSSNFKESALRKQSLYLKFDPLMRESPKKAAGPVAHGDVSRPVAFVSRLETPQVAE
KPASGQQKDDFKLFDAPATFPQPVNTEEAIIEVLKYSQKDMDAAIARVLAEGKEKEEQWS
EKYNKKLHDVQEMRKIIAEFELVMARMQTDHEKEKDLAQVKLDEALLEKEQVSSDLNAME
RSFSDLFKRLEKYKGVVEGYKKNEEILKACAQDYLTRIKKEEHRYHTLKAHAEEKISLAN
EEIAEVRSKNKAEVSALQAQLRREQLKAQSLEKSLDQKVKEAEELTKLCDELITKVQKG
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgttgacgtcaatgatgagaatcgtggggtctgtcctggaggaaagcacaac
agctcaattaacgacatttttgccctggatcagccaactgggagaccctccatcctgcgt
cagaccgagaacctgcccagcaagacggtgccaaagggaacaaaggtggcttttcagact
ccaagaagagaccctgtgactaagagaattgtatctcccagcaagtcgctcaagatggcg
agtgtggacgagcgcacaaaagggacggagtccttaaactttgataaaataaatacttta
ccaaaagaggccactgagcagcctgagcccaaacaagaggtgtcatcttaccctgatgat
gacatgccgatacaaagcaagggaggttatcagtttgatttcgacaacctcgactccatc
aatccatttctgagttcggtaaccacggtgctttctcccgcgaggccctttctcgaaaac
cctccggaaccagagaacaactgggaggagcccgccaaaatggaaacggcgctagacgag
acccttccattcacccagtctgtggaaagctccctggttgacgtctcggccgacatcagc
tccagagatagcagcgtggtcacagtggcgaaggtccaccgcgttgaggaacaagattcc
tgcaccgccacacctgatgataaacaacccgaaagagtgtcctcaaatgtccatcaagac
aaagagcccggcagctttttggaagacgcccctctgacgtccgacggggcttacactttt
gattttgacaaccttgacacgatcaatcctttccaaaccggcggctccaaaatcccaaat
tcaccggtcccggagaggaccgtgccacacggccacccgcctgttgaggagacacagaaa
aaggaaactgaacctaccgatgtggtagacgggcctgagctggctcaagcaactctggaa
ctggtcgacttctccactgactgcagtgtggtcacagagggggcggccccgggagacgag
gtacgagattcatgcaccgccgcaccaggggaaactcgtcctgctcaaatgtctcccacc
gtgcatcaagacaaagtttcaggcagttttgtggaagacgcccctctgctggtgaaaggc
gcttacagggtggattttgacaaccttgacgcggtcgatcctttccaaaccggcggctcc
aaaatcccaaattcaccggtcccggagaggaccgtgccacacggccacccgcctgttgag
gagacacagaaaaaggaaactgaacctaccgatgtggtagacgggcctgagctggctcaa
gcaacactggaactggtcgacttctccactgacggcagtgtggtcacagaggggacggcc
ccgggagacgaggtacgagattcatgcaccaccgcaccaggggaaactcgtcctgctcaa
acgtctcccaccgtgcgtcaagataaagactcccctctgctggtgaaaggcgcttacgcg
gtggattttgacaaccttgacgcggtcgatcctttccaaaccggtggctctaaaatccca
aattcacccgtcctggagaggaaagtgccaaacgctcacccacctgttgagacccagaaa
aaagaagctgaacctaccgtggcggaggcgcctgcgctgcctcaagcggcgccgcaaccg
atcgacttccccagtgacggcagtgcggtcgtggaggggacggccccggcagacgaggtt
cgaggtgtatgcaccgccacgccggaggaaagggagcctgctaaaatgtctcctgctgtc
caccaagacaaagcgtctggcagttttgtggaagaggccccactcccggcgaaaggcgct
tacaccgtggactttgacaacctcgacgcagtcgatcctttccacaccggccgctctaaa
atccagaattcgcctgtgaggacagcgccaggcgtctccccccacgatgaggaggcgcag
attaagcaaaatcaacccaccggtgttgtcatacctggggtgactcaagaggggcctatt
ctgcctgtgaaggaacccgcagtggctccgccagcggatgccccaatcaaggagggagcc
gtcaaactagagtttaatttcgacgacggcagggaggtcaaacggagacccccgcccaag
aaatttggcaaaaggccagcgggggtgaaacccgtagaggggaagccggcgtgtgacgcc
aaaccgccgaagggatcgccggcgcggccggatgccgctggcgttcccgttcccactgcg
tcctactcgtttgactttgacaagttggatgagccaaactacaatccctttgggactaaa
gcaagcgtgaacgactcttcaatgtgcggcaagaaatccggccccgtgctcatggaagct
tccattccagagcaggcggacaggccggttcagaaggacgctgtatcttcagcatgcgct
gcagagagtgtccaacccgagagggcagggaggcagactgccgaatacgcagacactaag
actccttctcagcaagacagcggatttctccttgaagctgaacgaccctcgcagagtctt
cctggtgttgaactgtgtcagccggagcagaagtcgcacaccgccatgtcagagttcaat
aatgagtttgttcctggaaatttgtttatggccaatgacttggatgggcagatcgattac
ctcgaacagtttgggtccagcaatttcaaggaatccgcattgaggaaacaatccttgtac
cttaaatttgaccctctgatgagagagagccccaagaaggctgcaggccccgttgctcac
ggcgacgtctcccgccccgttgcctttgtgtcacggctggaaactccacaggtggcagaa
aagcctgcaagcggacaacaaaaggatgatttcaaactctttgatgcaccagctactttc
ccccagccagtgaacacagaggaggccattatcgaagtgctgaagtacagtcagaaagat
atggacgcagccatcgccagggtcctggcagaaggaaaggaaaaagaggagcaatggagt
gaaaagtataataagaaacttcatgatgttcaagaaatgaggaaaatcattgcggaattt
gagcttgtgatggcgagaatgcagactgatcacgagaaagagaaggatctggcccaggtg
aagcttgacgaggctctgctggagaaggagcaggtgtccagtgacctgaacgccatggag
agatctttctccgacctgttcaagagactggagaagtacaagggtgtcgttgagggctac
aaaaagaatgaagagatcctgaaagcgtgcgctcaggactatttgacaaggatcaagaag
gaagagcaccgctaccatacccttaaagctcatgctgaggagaaaatttctcttgcaaat
gaagagatcgctgaggtgcggtccaagaacaaggcggaggtctctgcgcttcaggctcag
ctgcgacgggagcagctgaaggcgcagtcgctggagaagagcctggatcagaaggtgaag
gaggctgaagagctcaccaaactttgtgacgaactcatcaccaaagtccagaagggttaa
DBGET
integrated database retrieval system
