KEGG   Pungitius pungitius (ninespine stickleback): 119227843
Entry
119227843         CDS       T07626                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03082  ATP-dependent chromatin remodeling
ppug03083  Polycomb repressive complex
ppug04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119227843
   03083 Polycomb repressive complex
    119227843
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    119227843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppug03036]
    119227843
Chromosome and associated proteins [BR:ppug03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     119227843
  Histone modification proteins
   HAT complexes
    HATB complex
     119227843
   HDAC complexes
    Sin3A-HDAC complex
     119227843
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     119227843
    PRC2.2
     119227843
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     119227843
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119227843
  Chromatin remodeling factors
   NuRD complex
    119227843
   NuRF complex
    119227843
   NuRF complex (fruit fly)
    119227843
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 119227843
NCBI-ProteinID: XP_037342902
LinkDB
Position
14:complement(3330991..3334780)
AA seq 424 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHIVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQT
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggccgacaaagacgctgcgtttgacgatgctgtggaagaacgggtgatcaatgaggag
tacaagatctggaagaagaacacccctttcctctatgacctggtcatgactcacgccctg
gagtggcccagcctcactgcccagtggctgcccgacgtcaccaggcccgaggggaaggac
tacagcgtacaccggctggtcttgggaacgcacacttcggacgagcagaatcacatcgtg
atcgcgagcgtccagctccccaacgatgacgcccagttcgacgcgtcgcactacgacagc
gagaaaggagagttcggaggcttcggatctgtaagcgggaagattgagatcgagatcaag
atcaaccatgagggtgaagtgaaccgagcccgctacatgccccagaacccctgcatcatc
gccacaaagacccccaccagcgacgtgctggtcttcgattacacgaagcacccgtcaaag
cccgacccctctggagaatgcaccccagatctgcggttgcgaggccaccagaaggagggc
tacggcctctcctggaaccccaacctcagcggctgcctcctcagtgcctccgatgaccac
acgatctgcctgtgggacatcagcgccgtgccaaaggagggaaagatcgtggacgccaag
accatcttcacgggccacaccgccgtggtggaggacgtctcctggcacctgctccacgag
tcgctctttggctccgtggccgatgaccagaaactcatgatctgggacacgcggtccaac
aacacctccaagcccagccacgccgtggacgcccacaccgctgaggtcaactgcttgtcc
ttcaacccctacagcgaattcatcctggccagtggatctgcagataagactgtggctctt
tgggacctcaggaatttgaaactgaagctgcactcgtttgagtctcacaaggacgagatc
ttccaggtgcagtggtcccctcacaacgaaaccatcctggcgtccagcggcaccgaccgg
aggctcaacgtctgggacctcagtaagatcggagaggagcagtcccccgaggacgccgag
gacggcccccccgagctgctgttcattcatggcggacacacggccaagatctccgacttc
tcctggaaccccaacgagccgtgggtcatctgctctgtatcagaggacaacatcatgcag
gtctggcaaatggccgaaaacatctacaacgacgaagacccggaaggtgccgcagacagc
gaggtgcagacatga

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