Pungitius pungitius (ninespine stickleback): 119227981
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Entry
119227981 CDS
T07626
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227981 (rin3)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
119227981 (rin3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
DUF5736
Motif
Other DBs
NCBI-GeneID:
119227981
NCBI-ProteinID:
XP_037343115
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All DBs
Position
14:complement(15511619..15521812)
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AA seq
1116 aa
AA seq
DB search
MMEPSVVCKETSHASPGTGSLDTISTTPPASVLPSPPTSAPSLPSSNPPIRPCRPKPPPP
LVKSSSSPLCAPAPVSTLPTLPPHLPPISKLKPSSALSIPPPSTVAPPVPHFPPPLSLPP
PLSPTLVSPAPLASLKPTVSSDLTPSLTPLPTASLPAISPPSSSSSLPPPPPPPNPVIPP
SPPAPLLLNPIDRLLASISVWQPKGLSQDQTTSILEKEMAGAFLLHGTQDEVTALSVRLP
DEEGASPVHNLMVKKHKTYLHLDGSSLVFDDIFKLILFYIASRDILAIPLRLPHAITTAS
QREELEVISAMGADFWMSDLNQPAKDRDLALDQTLDSLYLKVNPVTVEESDLKDLTPPQP
HKVSTQTPPSSMQNGEVPQNISTEVKGQAQTTTTQDIKYKRPPPRPPSLSSGSGMGLLFS
SPPSLHTSPSPAERKEEGKGGASKREERKSMSTSLTPSRPPVPPQSRSAPPLPPAPLRRT
SSKRSTNTEEGEGTEREKGQNPALKTEQEVGEEGGDDKTGSKPGQMDEGVEQQNGSQCQE
NEVTDGREKGEREEKEEKEEKMEKAEHEQKSSPHSAPLMKKPSRPVPPPRRKPSSPDAPV
CPKQAGGGSANQTAGIRGPPPSPARRPDVSLYSPQGGSVLVTDPDSRSTSSTEEEGEPNQ
EQEQSPNRSAESRSPKAAGRRTPTTVMLGRARYRLSTVLTGLISHDRRLTQRLVELARDP
LSYFGNLVKEHRMFTLETMSKHSSSTELLQEIRQMMTQLKSYLLQSTELQAMLEPQHQYT
EDKLESLAEAALCKSVLKPLREPIYECLKKLHTNDGSMKQLAQNQSGVLGSTTTALGITT
AVPEASSLEKINIKLNNLHLEYSPQKKIELMLKACKLIYDSMSVSSPGRAHGADDFLPVM
MYVLARSNLSSLQLDVEYMMELMDPSLALGEGSYYLTTTFGALEHIKTFDQQRSATRQLS
REVQDSIHRWERRRTLNQERMVQGSVRDFLTVCCPEIGASPKTLGVLPTTTMQQLAEQCA
ARFEQDSYMLSVYMDGVHQPMAPTELALTVKNSSQPGAYCLVFHPIDQPVEQRQPGRSCP
ADPPPAPPAGSAPSADFAAADSVEPEGKEEESLISL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacccagcgtcgtttgcaaggagacaagccacgcaagccctgggacaggatca
cttgacactatatccaccaccccccctgcctctgtccttccatctcctcccacctctgcg
ccctccttgccctcctccaatcctccgatccggccatgtcgaccaaaacccccccctccc
ttggtgaagtcctcctcatcccccctgtgtgctcccgcacctgtgtccactcttcctacc
ctccctccccatctacctcctatctcaaagctgaaaccttcttccgccctctccattcct
cccccttccaccgttgctccccctgtcccccacttccctcctcccttgtctcttcctccc
cccctctctcctactctagtctctcctgctccgctggcttctctaaagccaactgtctcc
tctgatcttactccatccttaactcctcttcccactgcttcattgccagcgatctcaccc
ccctcttcctcatcatctcttcctcctcctcctcctcctccaaaccctgtcatcccacca
tcacctccagctcctctattactaaatcctatagatcggctgcttgcaagcatttccgta
tggcagccaaagggactcagccaagaccaaacaacgagtatattggagaaagagatggct
ggggccttcctgcttcacggcacacaggacgaggtcacagcgctgtcagtgcgcctgcct
gatgaagagggggcgtcgcccgtacacaatctgatggtcaaaaaacacaagacatatctt
cacttggatggctcctctttggtctttgatgacatcttcaaattgatcttgttctacatt
gccagcagggacattctggccatcccattgaggttaccccacgctattaccacggcatct
cagagagaagagttggaggtcatctctgcaatgggtgcagatttctggatgtccgatctc
aaccagccggcgaaggaccgggacctggctttggatcagacccttgacagtctgtacttg
aaagttaacccagtcactgtggaggagagtgacctcaaagacctaacccccccccagcct
cacaaagtcagcactcaaacacctccctcctccatgcagaatggagaagtcccacagaac
atcagtacagaagtcaaaggtcaggcccaaaccacgaccacccaggacattaaatacaaa
cgccctccaccacgacccccgagcctgagctcagggtcagggatgggcctcctcttttcc
tcccccccctcgcttcacacttcaccatcaccagctgagagaaaagaggaaggaaagggc
ggagcaagcaagagagaagagaggaagtcaatgtccacatcactcactccatcgaggcct
cctgttcccccacagagccgtagcgctcccccgctgcctcccgctcctctccgccgcacc
tcctccaagagaagcactaacacagaggagggagaggggacggagagagagaagggacaa
aatcctgcattgaaaactgagcaagaggtgggagaagagggaggggatgacaaaacggga
agtaaaccaggtcagatggatgagggggttgaacaacagaacggtagccagtgtcaagag
aatgaggtaacggatggccgagaaaagggagagagagaagagaaggaggaaaaggaggag
aaaatggaaaaagcagagcatgaacaaaaatccagcccccacagtgcgccattaatgaaa
aagccgtcccgtccagtccctccaccccggaggaaaccgtcttccccagatgcacctgtg
tgccccaaacaggcagggggaggatcggccaatcagactgctgggatcagagggccccct
ccctcaccggcgaggcgtcccgacgtgtctctgtactcgccacaggggggtagtgtgctg
gtgaccgatcccgactcccgctctaccagcagcacggaggaagagggagagcccaaccag
gaacaggagcagagccccaatcgctctgcagagagccgcagccccaaagcagcagggagg
agaacccccaccacggtaatgttgggccgagcccgctaccgcctgtccaccgtcctcaca
ggcctcatcagccacgaccgccgcctcacacagcgcctcgtggagctggccagggaccct
ctgagctacttcggtaacctggtaaaagagcaccgcatgttcaccttggagaccatgtcg
aagcactcatcctccacggagctgttacaagagatcagacagatgatgactcagctgaag
agttacctgttgcagagcacagagctgcaggccatgctggagccacagcatcagtacaca
gaagacaaactggagagcctagcagaagccgctctatgtaagagcgtactgaagccactg
agggagccgatttacgagtgtctcaagaagctgcacaccaacgacggcagcatgaagcag
ctggcccagaaccagtctggcgtcctgggcagcaccaccacggcgttggggataaccact
gccgtccctgaggcctcatctttggagaagatcaacatcaagctgaacaacctccatctg
gagtactctccccagaaaaagattgagctcatgttgaaggcctgcaagctcatctacgac
tccatgtctgtcagcagtccagggcgggcccatggcgctgacgacttcctgcctgtaatg
atgtatgtcctggccagatccaatctgtccagcctgcagctggacgttgaatacatgatg
gaactgatggacccatcgttggcactaggagaaggttcctattatctgaccaccaccttc
ggcgccctggagcacatcaagacttttgaccagcagaggtcagcaacacggcagctcagc
agagaggttcaggactccatccaccgctgggagagacgacgcacgctgaaccaggaacgc
atggtccaaggatctgtgcgggactttctgacagtgtgctgtcccgagattggagccagt
ccaaaaactctgggtgtcctcccaaccaccacaatgcagcagctagctgagcagtgtgct
gcacgctttgaacaagactcctacatgctcagtgtgtacatggatggcgtccaccagcca
atggctcccaccgagctggccctcacggtgaagaacagctcccagcccggagcctactgc
ctcgtctttcaccctatcgaccaacccgttgagcagcgccagccgggacgcagctgcccc
gctgacccgcctccagctccccctgcagggagcgcgccctcagcggactttgcagctgcg
gacagcgtggagccggaggggaaagaggaggagagtctgattagcttgtag
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integrated database retrieval system
