Pungitius pungitius (ninespine stickleback): 119227996
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Entry
119227996 CDS
T07626
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119227996
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
119227996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
119227996
NCBI-ProteinID:
XP_037343133
LinkDB
All DBs
Position
14:complement(7041518..7043925)
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENSNAGGNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSALMLQGNMNH
PGASAYPMSGLGPPQPVHSMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtccatattaccgtcgttcgggtttacgcaggagcaagtggcgtgcgtttgcgaggtg
ctgcagcagggggggaacctggagaggctcggccgcttcctgtggtcgctgcccgcgtgc
gatcacctccacaagaacgagagtgtcctcaaagccaaggcggtggtggcctttcaccgg
gggaacttcagagagctttacaaaatcctggaaagccaccagttctctccgcacaaccac
ccgaagctgcagcagctgtggctgaaggcgcactacgtggaggcggagaagctgcgcggc
cggccgctcggagccgtggggaagtaccgggtgcggaggaaattcccgctgccccgcacg
atatgggacggcgaggagaccagctactgctttaaggagaagtccaggggcgtcctgagg
gagtggtacacgcacaacccctacccgtccccgcgggagaagagggagctggccgaggcc
acgggactgaccaccacacaggtcagcaactggttcaaaaacagacggcagcgagacaga
gccgcggaggcgaaggagagagaaaacagtgaaaacagcaacgcaggcggcaacaaacag
aaccagctgtccccgctggacggaggaaagtctctcatgtccagctcggaggacgagttt
tctcctcctcagagccccgaccagaactcagcgcttatgcttcagggcaacatgaaccac
cccggggcctccgcgtaccccatgtccggcctggggcccccacagccggtgcacagcatg
cacggacacccgcaccaactgcaggactccttgttgggacctctaacctccagtcttgtg
gatttgggctcttaa
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