Pungitius pungitius (ninespine stickleback): 119228194
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Entry
119228194 CDS
T07626
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04020
Calcium signaling pathway
ppug04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119228194 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119228194 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ppug04030
]
119228194 (ptafr)
G protein-coupled receptors [BR:
ppug04030
]
Rhodopsin family
Others
Platelet activating factor
119228194 (ptafr)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
CitMHS
Motif
Other DBs
NCBI-GeneID:
119228194
NCBI-ProteinID:
XP_037343501
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Position
14:complement(9211101..9213576)
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AA seq
379 aa
AA seq
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MDSTTEQVAQNGTPVFLDSEFRYVAFPVVYSIIFILGIIANLYVLFVLRCLRESKAMGEI
RIYMTNLTIADLLFVCALPFWIDYYRRRGHWIYTDFMCRVTGTLFFINTYCSILFLGAIS
INRYWAVSRPLDVATSDHRSRGIIVSVVIWLLTLAISITFLVYPGTNTDDNNVTRCFEGY
HNNTDSGKRVVFAFNLAIVAGFFLVFFVVVVCNFLIAQVLLSKSPLQSSKVRSATVTSRK
SQRAVSFSSKKPKGVKRRALQMLLSVVGVFVVCFLPHHVVQCFWTLAVLQIETDYGHVDW
TPNTRQALNDAHQITLILMSLNCILDPVVYFFATKKFKGFIVAHIKKIAKGEGCSRTLTT
EMSVHSQRLQSEHQEPEKN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggactcaactacggagcaggtggcccaaaacgggacccccgtcttcttggactcagag
ttccgatatgtcgccttcccagtcgtctatagcatcatcttcatcctggggatcatcgct
aacctctacgtgttgttcgtcctgcgctgcctccgagaatccaaggccatgggagaaatc
cgcatctacatgacaaacttgaccatcgctgacctccttttcgtgtgtgcccttcccttc
tggattgactattacagacggcgcggccactggatttacacggacttcatgtgccgggtg
actggcacgttgttcttcatcaacacgtactgctccatccttttcctcggcgccatcagc
atcaaccgctactgggcggtatcgcggcctctggatgtggccacctcagaccacagaagt
cgggggatcatcgtgtccgtggtcatctggcttttgacccttgcgatttctattacattc
cttgtatatccagggaccaatactgatgataacaatgtcacccgctgttttgagggttac
cataacaacactgattcagggaagagagtagtttttgcctttaaccttgcaatagttgca
ggtttttttcttgtcttttttgtggtcgtggtgtgtaatttccttattgcccaagtgttg
ctttccaaaagtcctcttcagagctcaaaagtccggtctgcaacggtcacgtcaagaaag
tctcaacgggcggtgtccttctcatccaaaaagcccaagggagtgaaacggagagctttg
cagatgttgctttcagtggtgggagtgtttgttgtgtgtttcctgcctcatcatgttgtt
caatgcttctggacactggcggtgttgcagatagaaacggactatggccacgtggactgg
accccgaacacccgtcaggcgctcaacgacgcacatcagatcactctgattctaatgagc
ctgaactgcattttggatcctgtggtttatttttttgccactaagaagttcaaagggttc
atcgtggcacacataaaaaaaatagcgaagggagaaggctgctcgaggacgctcaccacc
gagatgtctgtgcacagccaaagactgcagagtgagcaccaggagccggaaaaaaattga
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