Pungitius pungitius (ninespine stickleback): 119228236
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Entry
119228236 CDS
T07626
Symbol
tpma
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04260
Cardiac muscle contraction
ppug04261
Adrenergic signaling in cardiomyocytes
ppug04814
Motor proteins
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119228236 (tpma)
04820 Cytoskeleton in muscle cells
119228236 (tpma)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119228236 (tpma)
04261 Adrenergic signaling in cardiomyocytes
119228236 (tpma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119228236 (tpma)
04147 Exosome [BR:
ppug04147
]
119228236 (tpma)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
119228236 (tpma)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of microglial cells
119228236 (tpma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
Sec2p
DUF745
Rod_CreS
PUMA_CC
Lebercilin
DUF3450
SlyX
ATG16
HAUS1
DUF16
ERM_helical
TMF_DNA_bd
FKBP15
CENP-F_leu_zip
Laminin_I
Exonuc_VII_L
XhlA
FPP
TMP_N
CC_Bre1
DUF1664
MAD
EzrA
Motif
Other DBs
NCBI-GeneID:
119228236
NCBI-ProteinID:
XP_037343524
LinkDB
All DBs
Position
4:17535649..17543683
Genome browser
AA seq
290 aa
AA seq
DB search
MDAIKKKMQMLKLDKESALDRAEQAESDKKAAEDRSKQLDDDLAGLQKKLKSTEDELDKY
SEALKDAQEKLELAETKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAEMSESKCSELDEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIPSIQAA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaaaaagatgcagatgctgaagctcgacaaggagagcgcattggac
agagctgagcaggccgagtcagacaagaaagcagcggaggacaggagcaaacagcttgat
gatgacctggcaggactgcagaagaagctcaagtcaactgaggatgagttggacaagtac
tccgaagccctgaaggatgcccaggagaaactggagctcgctgagacgaaagccacagat
gctgagggtgatgtagcttccctgaacagacgtattcagctggtcgaggaggagttggac
cgcgctcaggagcgtctggccacagcactcaccaagctggaggaggccgagaaggctgct
gatgagagcgagagaggcatgaaggtcattgagaacagggcaatgaaggacgaggagaag
atggagctgcaggagatccagctgaaggaggccaaacacattgcagaggaggctgaccgc
aaatacgaggaggtggcccgtaagctggtgatcattgagagtgacttggaacgtacagag
gagcgtgctgagatgtcggagagcaaatgctccgagctcgacgaggagctgaaaacggtg
cagaacaacctcaagtctctggaggcccaggcggaaaagtactctcagaaggaggacaag
tacgaggaggagatcaaggttcttacagacaagttgaaggaggccgagacccgcgctgag
tttgctgagagatcagtcgccaagcttgagaagaccatcgacgatctggaagatgagctg
tatgcccagaaactgaaatacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacttccataccatctatacaagcagcttga
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