Pungitius pungitius (ninespine stickleback): 119228341
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Entry
119228341 CDS
T07626
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119228341 (stxbp5l)
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119228341 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
119228341 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
WD40_Prp19
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Lgl_C
Beta-prop_DCAF4
Synaptobrevin
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
119228341
NCBI-ProteinID:
XP_037343614
LinkDB
All DBs
Position
10:450303..528425
Genome browser
AA seq
1265 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTIGSPSSGSAAGTPTSAPTPKEIDVQETLVSENFQLCKTVRH
GFPYQPTALAFDPVQKILAVGSRTGGIRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFMSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQWDLRGKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLSMWNLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEFKTSRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDHPIVEFMALCETPY
NNEVQEPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDIIPI
LYSMGAKHKKTGYSHKEWPVAGGLWTLGSNTYPEIILTGHADGSIKFWDASAITLQMLYK
LKTSKAFEKPKPAEGRAAEMVEEDPFAVQMVSWCPHSRIFCVVGISAHIILYRFSKYEAN
AQIVSLEVRLQCETEDMVTPSESENHPCFSEAGSRSPQAHHQHPASPGSATPEGNRDSVP
CIKVKDRMVRVPPGYQAELVIQLLWADGEPPQQITSLDINSAYGLLALGNCNGLAVVDYL
QKTILLCASTLDLYGAADPYQRLTRSPRRNRQSTSEFCMRGLSNFYSDSKKRIRTSYQSL
TELSDNQQSVDMERSKSPTSVHYPTSLHNEPRIHPEPVASLRASHCSPVFYLLDNVKGPG
RKLSLPTDLKTDLDHVNGHCTSPTSQAKPRVPMGPEGPRLTRRGPGRPPFRKAQSAACME
VSLPVSHTEVGYASRRAMLQQFHGVTMYSHDEHPTSAPYCWSERESRENSFSRSRSSSVC
SIDRDTKEAVTTLQFGESYGRKGDAMPTPCLWVGTSLGVVLLIPMSIPTDQEERMDEPVT
IGPSGTVLMLKGSVLRFSFLDCTGALIQSPHEVWRDPNAPEDPERPRRRKLVNFSPSSSQ
DNCGEGHLAVVCSEKQAKVVLMPSQSCLFVHNITESSFVLRADVVSLCSSVCLACFCANG
HVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMCDNL
QEMLGELFTPIETPEAQNRGFLKGFFGGNSHNFDREELFGEASAGKASRSLAQHIPGQVG
MEGMKVAASGVMGDLARARVALDERGQRLGELEDRTALMMTSAETFSKHAHELMLKCKDK
KWYQL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtactggacggtttgacgacctcctctccgggagggactatc
ggatccccatcgagcggcagcgccgccgggactccgacatcggcgccaactcccaaggaa
atcgacgtccaggagacgctggtgtcggaaaactttcagctgtgtaagacggtgcgtcac
ggctttccttaccagccgactgctttggcctttgaccccgtgcagaagatcctggccgtc
ggctcccgaacaggcggcatacggatactgggacgacccggcgtggactgctactgtcag
catgagagcggggcagcagttctccagctacagttcctcatcaacgagggagcgctggtc
acagcctgtgccgatgacacgcttcacctgtggaatctccgtcagaggcgaccggctgtc
ctccattcactgaagttcaatagagagaggatcacgttttgccaccttcccttcatgagt
aaatggctttatgtggggacggagcgcggaaacacgcacatcgtcaacatcgagtccttc
gttctgtccggatacgtcatcatgtggaacaaggccatagaactagcaactaaaacccat
ccgggacccgtggtccatttgagtgacagcccaaaggacgaaggcaagctgctcataggc
tttgaaagcgggacgatcgttcagtgggacctgcggggcaagaaagccgacttcagaatc
tactacgatgaggccatccattccgtcagctggcatcacgaagggaagcagttcatgtgc
agtcactcggacggcagcctgtccatgtggaacctcagaaacaccaccaagccgttccag
gtcaccttccctcatgggaagatacagaaggacgggagaaaggagtcgtgtaaaccgatc
ctcaaagtggagttcaagacctcgaggaacagcgagccttttgttatcttctctgggggg
ctctcatacgacaaggcggggcgccggcccaccttgaccatcatgcacggcaaggccatc
actgtgcttgagatggaccatcccatcgtggagttcatggccctctgcgagactccgtac
aacaacgaggtccaagagccttacgcggtggtggtgcttttggagaaggacttaattgtg
gtggatctgacccagagcaacttcccagtctttgagaacccttaccccatggacatccac
gagtctccagtgacttgcacagcctattttgcagactgtccgcccgacatcatccccatc
ctctattcgatgggggccaaacacaagaagactggctacagccataaggagtggccagtc
gccggaggactgtggacgttaggctccaacacctacccagagatcatccttacgggacac
gctgacggatcgattaagttttgggacgcttctgcaatcacactacagatgttgtacaag
ctgaagacctccaaagcctttgagaagccgaagccagcggaaggccgggcggccgagatg
gtggaagaagacccctttgctgttcagatggtcagctggtgcccccacagtcgcatcttc
tgcgtggttggcatctcggcccacatcatcctgtaccgcttcagcaaatacgaggccaac
gctcagatagtgtcactagaggtccgcctacaatgtgagacggaggacatggtcactccg
tctgagagtgaaaaccatccctgcttctccgaggccggctcccgctcacctcaagcccac
caccaacacccggccagcccgggcagcgccacgccggaggggaacagagacagcgtgccg
tgcatcaaggtgaaggaccggatggttcgggtccctccgggttaccaggcggagctggtc
atccagctgctgtgggcagacggagaacctccacaacagataaccagcctggacatcaac
tcggcctacggccttttggcgttggggaactgtaacggcctcgccgtggtggactacttg
cagaagaccatcctgttgtgcgcgtcgacgctggatctgtacggagctgccgatccgtac
caacgccttacccgctcgccccgcaggaacagacagtccacctcagagttttgcatgcgc
ggcctgtctaacttttattcagattcaaagaaaaggatccgcacatcctatcagagcctc
accgagctctccgacaaccagcagtccgtagacatggagagaagcaagtcgcccacctca
gttcattacccaacctcccttcacaatgagccccgcatccacccagagcccgtggccagt
ctgagagccagccactgcagtccagtcttttacttgctggacaatgtaaagggacccggc
agaaaattaagtctgccaacagatcttaagactgatcttgatcatgtcaatggacattgc
actagccccacctcccaggccaagccccgcgtcccgatgggccccgaggggccacggctt
acccgcagaggccctggccgaccgcccttccgcaaggcccagtccgctgcttgcatggag
gtctctttgcctgtgtcccacactgaagtaggctatgcgtccaggagggcaatgcttcag
cagtttcacggagtcactatgtactcccacgacgagcaccccaccagcgccccctactgc
tggagtgagagagagagccgcgagaactccttcagccgctcgcgcagctccagcgtttgc
agcatcgaccgggacaccaaggaggccgtcaccacgctgcagttcggcgagtcctatggg
cgcaagggtgacgcaatgcccaccccgtgcctgtgggtgggcaccagcctaggcgtggtc
cttctcattcccatgtccattcctaccgaccaggaggaaaggatggatgagcccgtgaca
atcggacccagcggcacggtcctgatgctgaagggctcggtgttgcgcttcagcttcctg
gactgcacgggagcgctcatccagagcccccacgaggtttggcgcgaccccaacgccccc
gaggaccccgagcggccgcggaggcgtaagctggtcaacttctcgccgtcgtcctcgcag
gacaactgcggggagggacacctggccgtggtgtgctccgagaagcaggccaaagtagtg
ctgatgccctcgcagtcctgcctcttcgtccacaacatcaccgagtcatcctttgtgctg
cgagccgacgtggtgtcgctgtgcagcagcgtgtgcctggcctgcttctgtgctaacgga
cacgtcatgacactcagtttgcccagtctgaggccgctgatggatgtgaattacctgcct
ctgacagacatgcgcatcgctagaaccttttgcttcaccaacggggggcaggccctatac
ctcagctccccgacagagatccagagaattacatacagccaggagatgtgtgacaacctg
caggagatgctcggggagctgttcacgccaatagaaacaccagaggcccagaacagaggc
ttcctaaagggcttctttggagggaattctcataacttcgacagagaggagctttttggc
gaggcgtcggctgggaaggcttctcggagtctggcccagcacatccccggccaggtgggg
atggagggcatgaaggtggcagctagcggggtcatgggtgatctggcgagggcccgcgtc
gctctggacgagaggggccagaggctcggggagctggaggaccgcaccgcgctgatgatg
accagcgcagagaccttctccaaacacgcccacgagctgatgctgaagtgcaaagacaag
aagtggtaccagttgtaa
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integrated database retrieval system
