Pungitius pungitius (ninespine stickleback): 119228365
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Entry
119228365 CDS
T07626
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119228365 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119228365 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119228365 (si:ch211-269e2.1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
tRNA_bind_3
PDS5
Motif
Other DBs
NCBI-GeneID:
119228365
NCBI-ProteinID:
XP_037343685
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All DBs
Position
10:complement(18244859..18258686)
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AA seq
1184 aa
AA seq
DB search
MGRGCRHLSAVLRSEEMIQDPTAASRPAEQNKNSHDEANTSRAVNQSEDELGIASSRKSV
RQRKRPHEGFENVQSKGAKAGRSSASRAGGRRGKRRHAEAVTLFDVLSMGRSAMQAVIGD
WIEAYGTRRDSSLLDLISFFIQCCGCKGVVTAEMCEGKEDRDVMSKMVEELDEVAGLQYK
KFLAFPWILTVTWPTDIDSAEYPLTQPGPYGRWFHSEFCDFVAALVAQCQRGVMFDGYLM
NSLICLLAELSDSCVRAFRHTCTLAAVKLLSSLVAVALSLSGAIENSHELHRVQKTKTTR
RRSPLKQQRIQGKITELREKRAEVETMMDVVFKGIFLKRYRDVLPEIRSLCMEELGLWMK
LYGSAFLNDSCLKYVGWMMHDKVPDVRLRCVLGLQALYGDPALLPKLDLFTSRFKDRMVS
MTLDKDSEVAVQTMKLLLLVSKTSDGALSDEDYRRLLRLVYSSQRPLAAAAGELLFARLL
NTEAPAPDTKINEEEARERQTSARLRALLHFHQESELRSHVAYLVDSLWDGGGALLKDWP
TLTSILLQEPSSRSPGLTRAEQVVLVEILVASVRQASEGPALAGRSGAKKVMSAREKRSQ
LDDCTKLTEHLLVVLPDLLAKFSGSCDTVASLMKIPQYFLPECPEADTPQAASRLMAEMG
AALDRPAGPALLEAAARTYLSLCGGGAPWRSVARTARDSLVRRWVDNLTALLGDSLQGES
PRFPADEERTADISATLKKLSAFHNCHDLLEWNLFGLLSPLLSAESGEGGAPPEVLLQVL
QCLSYCMLWSLSTSSGTLNSREKAESQRLQLRLFCERSNRCLSHPDHSVQQQAFVGVCDV
LTAHAHQLQRWDPSSFGPLLYTPGPRLQRALVTFVGAHVFVGADCGGQSADSEAGRPEEL
HRRRNLLAAFCKLIVHGVLEMSAAAEVFAYYLKYNDDYGDIIKETMYRTRQMDKLGSAHT
LGLCLQQLFLRLRGEQGSGGGAHPGVQTFTGIKELARRSALTFGDLVKFRECVVVVHRNG
IEFVFQEFSPTPDAPTPPYLSYLTILSEFSSKLLKPDKKIVFAYLQKHTAERVTDLQEEC
WQPLAYYRASLLAAAGAEDAASHASSERSPHRPGHSPSSGQKRKGNKSSGPFSPVDSEVS
KGQKSSFSPSHKDADPSSGRAEPPARRLDFEGSVLGEDTVDVEL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggatgcagacacctgagcgctgtgttgagatctgaggagatgatccaagac
cccactgctgcatccaggcccgcagagcagaataagaattctcacgatgaggcaaacacc
tccagggctgtcaatcaatccgaggacgagttggggattgcgagcagtcggaagagcgtg
agacaaaggaaaaggccacacgagggctttgagaatgtccagagcaaaggtgccaaggcc
ggtcgcagcagcgctagccgggcaggaggccgccgcgggaagcggagacacgcggaggcc
gtcaccctgttcgacgtgctcagcatgggccggagtgccatgcaggcggtgattggtgat
tggatcgaggcctacgggacgcgcagagactcctctctcctcgacctcatcagcttcttc
atccaatgctgcggctgcaaaggtgtggtcacagcagagatgtgtgagggcaaagaagac
cgtgacgtcatgagcaagatggtggaggaactggatgaggtcgctggtctgcagtataag
aagttcttggcctttccgtggatcctcacggtcacgtggcccacggacatagacagtgcc
gagtatcctctgacccaacccggaccgtacggccgctggttccactccgagttctgcgac
tttgtggcggcgctcgtggctcagtgtcagcgcggcgtcatgttcgacggttacctgatg
aacagcctcatctgcctgctcgccgagctgtcggactcctgcgtgcgggctttcagacac
acctgcacgctcgcagcggtgaagctgctgagctcgctggtggccgtggctctgagcctg
agcggcgccatcgaaaacagccacgagttgcaccgggtgcagaagaccaagacgacgaga
cggagaagccctctgaaacagcagaggatacaggggaagatcacagagctgcgggagaag
agggcggaggtggagaccatgatggatgtcgtcttcaaaggaatcttcctgaaaagatat
cgcgatgtgcttccagaaatccgctccctctgtatggaggagttgggtttgtggatgaag
ctctacggctccgcatttctcaacgacagctgccttaagtacgtgggctggatgatgcac
gacaaggtgcctgatgtgcgtctcaggtgtgtgttgggcctccaggctttgtatggcgat
cctgcgctcctccccaaactggacctgttcaccagccgcttcaaggaccggatggtctcc
atgaccttggacaaggacagcgaggtggcggtgcagaccatgaaactgctgctgctcgtc
tccaagacgtctgacggcgctctcagtgacgaggactaccggcggctgctgcggctcgtc
tactcttcgcagcggcctctcgctgccgctgcgggggagctgctcttcgcgcggcttctg
aacactgaagcccccgcgcctgacaccaaaatcaacgaggaggaggcacgtgagcgacag
acatccgcccgcctccgggctctgctgcacttccaccaggagtccgagctgcggagccac
gtggcgtacctcgtggacagtctgtgggacggcggcggcgccctgctgaaggactggccc
acgctcacgtcgattctgctgcaggagccctcctcacgcagccccggtctcacccgggca
gagcaggtggtgcttgtggagatccttgtagcttcggtgcgtcaggcctccgaggggccg
gcgctggcaggaaggagcggagccaagaaggtgatgagtgccagggaaaagagaagccag
ctggatgactgtactaagctcactgagcatcttctcgtggtgcttcctgacttactggct
aagttttccggtagctgtgacacggttgcctccctgatgaagattcctcagtacttcctc
ccggagtgtcccgaggccgacacccctcaggcagcgtccaggctgatggcagagatggga
gcagctttggaccgccccgcgggccccgcccttctggaggcggcagcccgcacgtacctc
agtctgtgtggggggggggcgccctggcgctccgtggcccggaccgcacgagactccctg
gtccggcgctgggtggacaacctgaccgctctgctgggggactcgctccagggggagagt
ccgcgtttccctgctgacgaagagagaactgcagacatttcagccacgttgaagaaactc
agcgctttccacaactgccacgacctcctggagtggaacctgtttgggctgttgtccccc
ctcctgtcggcggagagcggcgagggaggagccccccccgaggtgctgctgcaggtcctg
cagtgcctgtcctactgcatgctgtggtccctcagcaccagcagtggcactttaaactcc
agagagaaagccgagtcccagagactccagctgcgtctcttctgtgagaggagtaatcgc
tgtctctcccaccccgaccacagcgtgcagcagcaggccttcgttggagtgtgtgacgtt
ctgacggcgcacgcccaccagctgcagcggtgggatccctcctccttcggccctctgctc
tacacccccggccccaggctgcagagggcgctggtgaccttcgtcggcgcccacgtcttc
gtgggagccgactgtggcggccagagcgccgactctgaagcgggaaggccggaggaactt
cacagacggagaaatctgctcgcggctttctgcaaactgatagtgcacggggtgctggag
atgagcgcagccgccgaggtcttcgcgtactacctgaagtacaacgacgactatggagac
atcatcaaggagacaatgtacaggacgagacagatggacaagctgggcagcgctcacaca
ctggggctctgtctgcagcagctgtttctccgcctgaggggggagcaggggagcggcggc
ggggcccacccgggggtgcagaccttcaccggcatcaaggagctcgccaggcggtccgcc
ctcacctttggggacctggtcaagttccgcgagtgcgtcgttgtggtccacaggaacggc
atcgagtttgtgttccaggagttcagtccgaccccggacgcccctacgccgccgtacctc
tcctacctgaccatcctcagcgagttctccagcaaactcctcaaaccggacaagaagata
gtcttcgcgtacctgcagaagcacacggcggagcgcgtcacggacctgcaggaggagtgc
tggcagccgctggcctactaccgcgcgtccctgctggctgcggcgggagcagaggacgcg
gcgtctcacgcgagctccgagaggtcgccgcaccggcccggccactcgccctcctccgga
cagaaacgcaaaggaaacaagtcgtccggccccttcagccccgttgactccgaagtcagc
aaaggtcagaagtcaagcttcagtccaagccacaaggacgcggatccctcctccggccgc
gccgagcctcctgcgagacggttggactttgagggctccgtcctcggcgaggacacagtg
gacgttgagctgtaa
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integrated database retrieval system
