Pungitius pungitius (ninespine stickleback): 119228405
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Entry
119228405 CDS
T07626
Name
(RefSeq) plakophilin-3-like
KO
K28841
plakophilin 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04382
Cornified envelope formation
ppug04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119228405
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119228405
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Motif
Pfam:
Arm
Atx10homo_assoc
ARM_ARMC5
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
119228405
NCBI-ProteinID:
XP_062417982
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Position
4:5423469..5439017
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AA seq
685 aa
AA seq
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MSVSVADSCFLSALQPRTSCTAYVVPPDGPCLDPGARARRVREQVRMRLAENRSSSLPRL
DDTRNGSTDHNYPEAKSFSNTLGFSSRSMIHTPSRVMAMPTAPLRSSGFSSRSAVETSSK
AGYKQTSEVQSSFRSSHRRNTRSKSLCQADQEAPAITVLPPPENASYLITVPPMGTLRRS
LSGTLAQERGYWQEEEQPNQYTYKGPSHRTISRITNRQQHYQQQQPSSTFGQEGWVGTGR
GVPMAGDSWGTQWQQHVSRASHGMGTGQYQTSIHRAPSLRSLRSVGKGVDILDGASIHSN
DPLEDMQSLDMATAVQYLSESDAALQVLGAAYIQHKCYHSNEAKNQVRFLHGVPALVQLL
FSSDNQEVQRFSTGATRNLIYENADNKAALIDAGGVMRLVSILGQPDQELRKTITGVLWN
LSSRDNLKEKLSKEALSELTENVLIPLCSSFPLSASERDIFYNTSGCLRNLSSVNERTRR
KMRDMQGLVDSLVSYIQQEDRGDDKGLENSLCVMRNLSYQLYAELPPSVRLRLEGQTRAS
ASGKGEAIGCFTLYNKKDTQNQTNRAGALKVSIFVLKAKNMVSVLVSKLPSDGLQKTPSS
EVVINICGALNNLVTCSSLAARNISYFHGLPKLIGIKTMHDNSSGSVKAARAASTVLCNM
FQYNKLHKDYKQKGFARRDFADVTI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtcggtggccgatagctgctttctgtccgctcttcagcccagaacctcgtgc
accgcgtacgtggttcccccggacggcccgtgtctggaccccggggccagagcccggagg
gtccgggagcaggtccggatgcggctggcggagaacaggtcctcgtctctgcccagactg
gacgacacgcgcaatggatcaacagaccacaactatcctgaggcgaagagtttttccaac
acccttggtttcagttccagatccatgatccacacacccagccgtgtcatggctatgccc
acagcaccccttcgctcctctggtttctcgtctcgctctgctgtggaaaccagttctaaa
gctggttacaaacaaaccagcgaggtccagagcagcttccggtcctcacaccgcaggaac
actcgctccaagtcgctgtgccaagcggaccaggaggcccctgctatcactgtgttgcct
cctccagagaacgcctcctacctgatcacagtgccccccatggggaccctaaggcgcagc
ctaagcgggacactcgcccaggaaagaggctactggcaggaggaggagcagccaaaccaa
tacacctacaagggcccctctcaccgcaccatcagccgtatcaccaaccgacaacagcac
taccagcaacagcagccgagctccacttttggccaggagggttgggtgggcacagggaga
ggggtccccatggcgggggacagctgggggacacagtggcagcagcacgtgtccagggcc
agccacggcatggggacagggcagtaccagacgtccatccaccgggccccctcactgcgc
agtttgaggagtgtcgggaaaggagtggacatcttggatggagcatcgatacacagcaac
gacccgctggaagatatgcagagtctggacatggcgacagccgtccaatatctgtctgaa
tcagacgctgccttgcaagttcttggagctgcatacatacaacataagtgttaccatagc
aacgaagccaagaaccaggttcgttttctacatggcgttccagctctagttcagcttctt
ttctccagcgacaatcaagaagtgcagcgtttctccaccggcgccacgcggaacctcatc
tacgagaacgctgacaataaggcggctctcatcgacgccggtggagtgatgcgccttgtc
agcatccttggccaacctgaccaggagcttcggaagaccatcacaggtgtcctgtggaat
ctgtcctccagagacaacctgaaggagaagctttccaaagaagctttgtcagagctaacg
gagaatgtactgattcctctgtgtagcagcttccctctgagtgcatctgagagggacatc
ttctacaacaccagcggctgcctcagaaacttgagctcagtgaacgagaggacaaggcgt
aagatgagagacatgcaaggcctggtagactctctggtgtcctacatccaacaagaggac
aggggagatgacaagggtttagagaattccctgtgtgtgatgaggaatctgtcctaccag
ctgtacgcggagcttcccccctcagtcagactccgcctggagggccagacgagagcatct
gcttctgggaagggcgaggccatcggctgctttactctgtataacaaaaaagacacgcag
aaccaaaccaacagagctggagctttaaaggtctcgatctttgttctgaaagctaagaac
atggtcagtgttctggtctccaagctgcccagcgatggccttcagaaaacgccatcttcc
gaggtggtgatcaacatctgtggagccctcaataacctggtcacctgcagttccttggca
gcccgcaacatctcatactttcacggcctgccaaaattgatcggcataaagacgatgcat
gataacagctccgggagtgtgaaggctgccagagcggcctcaactgtcctctgcaacatg
ttccagtacaacaaactgcacaaagactacaagcagaaaggatttgccagacgagacttc
gccgatgtcaccatctag
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