Pungitius pungitius (ninespine stickleback): 119228445
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Entry
119228445 CDS
T07626
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
KO
K15188
cyclin T
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119228445 (ccnt2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119228445 (ccnt2a)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
119228445 (ccnt2a)
Brd4/P-TEFb complex
119228445 (ccnt2a)
7SK RNP complex
119228445 (ccnt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
DUF3602
Motif
Other DBs
NCBI-GeneID:
119228445
NCBI-ProteinID:
XP_037343888
LinkDB
All DBs
Position
10:18925113..18932531
Genome browser
AA seq
693 aa
AA seq
DB search
MAACRGSSSKWFFTREQLETTPSRRFGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDT
KSNAYLQQAQELVILESIVLQTLGFEITIDHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVISCVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKGDSSQLTDNPFPGPSMLQDHGDGTLSATTGFSK
AGVAFSVAMPGQSRDAPLSLDALAGTYNPASHSEWPLVNQSQAGYPSTCIKQEPLSIPLQ
DPALSLQTSASSLLQNPPTFKTEKALDFIAVKQEPKGGGGSGAGKQSAYAPSAQPPPPPP
SLAQKLSLDKYREKHAAELAVSGHKRSQDQYLGIMDFDTRGDMLSSSSTYASSTSVSHVD
HRKHSQPPTNSASPLKMKVPSSSTSGQDRRHHGDKRDKGSLKLRLAVPGSGGGPQLDRGG
QPIKDELKMKIKVSSSERHSSSDEGVANIIKSKHSSPVVSKEKHHRAADQSLHRHHKHGH
SHAHSGNGGAGPPLRGPPGLVGMDAILPPGSASLSSARKRAYLEAGHNHHPSSSFSKVSK
ISKGGTGAAGGLRTSQQYPPPSESPHEVGEQRH
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccggggatcctcgtcgaaatggtttttcacccgggagcagctcgaaacc
acgccgtcccgccgatttggagtagaaccggaccgagagctctcctaccgacaacaagct
gcgaatctgatccaagatatgggccagagactcaacgtttctcaattaacaataaataca
gctattgtttacatgcataggttttatatgcaccactctttcaccaaattccataggaat
atcatatctccaaccaccctattcctggccgcgaaagtggaagagcaaccccgaaaactc
gagcatgtcatcaaagttgcacacgcttgcctaaatcctcaagaaccacctctagacacg
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaatccatagtgctg
cagaccctgggctttgaaattactattgatcacccacacactgatgtggtgaaatgttcc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctgcacctcaccaccttctgcctccagtacaaaccaaccgtaatctcctgcgtatgcatc
caccttgcatgcaagtggtccaactgggagatcccagtttccactgatggaaaacactgg
tgggagtacgtggacaactctgtcaccctcgagctgctggatgagttgacccacgagttt
ctgcagattctggagaagacgccgagccgcttaaaaaggatacgcaactggagggcaaca
caagccgccaaaaagccaaagggcgacagctctcagttgacagacaacccgttccctggg
ccttccatgctccaagatcatggtgatggaacactctctgcaaccacaggtttctcaaaa
gccggcgttgctttcagcgtggccatgcccggccagtccagagacgcacccctgtccctg
gacgctctggccgggacgtacaacccggcgagccacagcgagtggcccctggtcaaccag
agccaagcaggttacccttccacctgcattaaacaggaacccctcagcatccctctccaa
gatcccgccctgtccttgcagacctccgcttcctccttgcttcagaatccgccgacattc
aagactgagaaagcgctggacttcatcgctgtcaaacaggaaccaaaggggggcggcggg
agcggagcgggcaagcagtcggcctacgctccatccgctcagcctcccccgcccccgccg
tctctagctcagaagctgtctctggacaaatacagagagaaacatgctgcggagctggca
gtctctgggcacaaacgcagtcaggaccagtatttgggaataatggattttgataccagg
ggagatatgttatcttcctcttctacctatgcatcatccacttctgtgagccacgtagac
catagaaagcattcgcaaccccccaccaactctgcctccccgctgaaaatgaaagtcccc
tcctcctcgacctcagggcaagataggcgccatcacggtgacaagcgggacaaaggctcg
ctcaagctccgcctcgccgtccccgggtctggcggcggcccccagctggatcgaggtggc
caaccgatcaaagatgagcttaagatgaagataaaggtctcatcgtccgagcgccacagc
tcatcggatgagggcgtggccaacattatcaagagtaaacattccagccccgtggtgagt
aaggagaaacaccaccgcgcagcagatcaaagcctccatcgccaccacaagcacggtcac
tcgcacgcgcatagcgggaacggtggggccggcccccctctgcggggccccccgggactg
gtcggcatggacgcgatacttccccccggatccgcctctttgtcttcggcacgcaagagg
gcgtacctcgaggccggccacaaccaccacccttcctcctcattctccaaagtgagcaaa
atctccaagggtggcactggtgctgcaggtgggctgcggacctctcagcagtaccctcct
cctagcgaatcgccacatgaggtgggagagcagagacactga
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