Pungitius pungitius (ninespine stickleback): 119228505
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Entry
119228505 CDS
T07626
Symbol
fer1l6
Name
(RefSeq) LOW QUALITY PROTEIN: fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119228505 (fer1l6)
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119228505 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
dsRBD2
Motif
Other DBs
NCBI-GeneID:
119228505
NCBI-ProteinID:
XP_062421183
LinkDB
All DBs
Position
10:complement(2808103..2826190)
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AA seq
1751 aa
AA seq
DB search
MHSKMLRSFSVGSFKVDVWTVYRQPGHQFTNKWAVLTNPGDISTGVKGYVKCDISVSAKG
DAVKPGPKASDAEEQIEKNLLVPEGFPSERPWARFFVKVYRAEGLPRNNSSIMANVTKAF
IGDNTALIDPYVEVSFFKQVGRTSTQKSTAEPAWNEQIVFTEMFPPLCQRLKIQVWDEGS
MGDVAIGTHYFDLRRISNEQDGDRGFLPTFGPAWINLYGSARNGSMGDDAVELNEGIGEG
VSFRGRVYMELAVEILSGGSGSESKLSRTLKPLKDAKAGKGGGTGGGGGGAGGGGGGGGG
GAGAAAGGADDEKGKAAAAEVLPVDSPPVLDADNNETFLLFGALFEATMIDRKIGDKPIS
FEFSIGNCGNVLEPPEKTAPRPPSPAVRRRALDVPVGGVAPGSSAPGASPASPLLPREPP
EAPPTSRSTTPPQRPLIVEGNKYYMHLPLEKQKPCVSVLSSWENRAYRLHTSNMLDNIAV
LFEEGVASAAELHRKSEPGAEHLLETVLREFCADARSFVAAAEAKLKAEGKSSYLTQLDR
KRLTLCKQELESMIGEAQFVVERKRKAGGVKEMLQHATKLTLKIRFLVEEPQHTVPDVFV
WLLSNNKRVAYARLRARDLLYSSSREARGIHCGKILTLFLKPPGKRVADLSVQAKVDVYL
WYGPSADSVHMLDDLPEGFSAATGGGAAAASCPPAALLCAEQHTFQLRCHMYQARGLIAA
DASGLSDPFARVTCLSHSQTTNVISQTLSPTWNQCLLMSRLLLSGDLQHIREEPPRVLVE
VYDDDALSKAEYLGATVAVPEVRLASDPYAPPTLQYSPLHCGSQPGGDLLAAFELLQVGG
AAAWFAXGRRGITHLSLSVQVHESAHQSLPPLGKQEGGIYTVPANIRPVLSTFRLEVLFW
GMRELKKVQLLSVDRPQVFIECAGKILRSSVIQKYKSNPNFPTLVDAIELELPENEHLHP
PLSITVVDWRAFGRSTLVGNHVINNLKAFKYTPPPALPAPAPTAPPPKRTEPPGPSAPPE
PGLYPSAGDTTLTAPLTNQDFLITVEGEGPAPPPAPAPPPAPGEDLKKTRGGAAKSTRGR
STKRKKRTIADESAECVIDWWSKYYASREKQDKQDGSPFPEVFDKALPYQGLLSDGIDSL
VGGVSDGDKKKKQKGKGTLDPNLGPATKLATLKLYNKELEAEFGSFNDWVNTYELFRGKA
SEEEGATEERLVGKFKGRFCLYKLNEDNAQDWDGDADAGDFRVSRGIPPNGLVQVLIRVY
IVSASNLHPADPDGKADPYIVLRLGKNEIKDRDNYIPKQLNPVFGRSFEMQATLPRESLL
SVMIYDYDLVGGDDLMGETRIDLENRFYSRHRATCGLPTEYSLDGYNAWRDGLKPSELLS
KLCRDHGLEEPLFRPGRISVADKVFVGKTCFMHEDEPLESYEHLSLKVLHRWAEIPAVGC
KLVPEHIETRTLFNKDRPGMDQGQVQMWVDIFPMDLPPPGPAVDISPRKPKGYELRIIIW
NTEDVILEDSSFLTGQQSSDIYIKGWLKGLEDDRQETDVHYNSLTGEGNFNWRFVFPFSY
LPAEKVIVVSKKEHIFSLDKSEQKLPAILSLQVWDFETLSSDDFLGTVELDLHGFPRGAK
TAKSCKADMLTEGTERISIFQQKRARGWWPFVKSGELTGKVEAEFHLLIAEEAEKNPVGR
ARKEPEPLPKPNRPDTSFSWFVNPFKCFFHLVWRSYKKYIVIALVLLISVLFLALLFYTL
PGAISQKIVNG
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgcactccaaaatgctgaggagtttcagtgtcgggtcctttaaggtggacgtgtggacg
gtctacagacagccaggtcatcagttcaccaacaagtgggcagtgctgaccaatcctggg
gacattagcactggggtcaaaggttatgtcaagtgtgacatcagcgtctcagcgaagggg
gacgccgtgaagccgggacccaaagcgagtgacgcagaggagcagatagaaaagaacctg
ctggtgccggaaggtttcccctccgagcgtccctgggctcgcttctttgtgaaggtgtac
cgagctgaaggccttcctcggaacaactccagcatcatggccaacgtcaccaaggccttc
atcggagacaacacggccctcatagacccgtacgtggaggtcagcttcttcaaacaagtg
ggtcgcacctccacccagaagtctacagcagagccggcgtggaacgagcagatcgtcttc
acggagatgttcccgccactgtgtcagaggctgaagatccaggtctgggatgaaggaagc
atgggcgacgttgccataggaacccattactttgacctcaggcgcatctccaatgaacag
gatggcgacagagggtttttacctacttttggccccgcgtggatcaacctgtacggctca
gcacgaaacgggtccatgggtgatgacgcggtggagctcaatgagggcatcggagagggc
gtgtccttcaggggtcgcgtctacatggagctggcagtggagatcctgtccggggggtcg
ggttcagagtccaaactcagcagaacgctgaagccgttgaaggacgccaaagcaggtaaa
ggtggagggacgggtggtggtggaggaggagcaggcggaggcggaggcggaggaggagga
ggagcgggagcagcagccggaggagccgacgacgagaagggaaaagccgcggctgcagag
gtgctgcctgtggactctcctcctgtgctcgatgccgacaacaacgagaccttcctcctc
ttcggagccttgtttgaagccaccatgatcgaccggaagatcggagacaagccaatcagc
ttcgagttctccatcggtaactgcggcaacgtcttggagcctccggagaaaaccgccccc
cggcccccgagccctgctgtcaggaggagagcgctggacgtgccggtcggcggcgtcgcg
ccgggctcctcggctcccggcgcctccccggcctccccgctcctccccagggagcctccg
gaggcgccccccacctcccggtccaccacgcctccccagaggccgctcatcgtcgagggg
aacaagtactacatgcacctgcccctggagaagcagaagccgtgcgtcagtgtgctgagc
agctgggagaaccgggcctaccgactccacacctccaacatgctggacaacatcgccgtg
ctgtttgaggagggtgtcgccagcgctgccgagctgcacaggaagtccgaaccgggggcg
gagcatttgctggagaccgtcctcagagaattctgtgcggacgccaggagcttcgtagca
gcagcggaggccaagctgaaagctgaggggaagtcgagctacctgacgcagctggacagg
aaacgcctcactctgtgcaaacaggaactggagagtatgataggagaggcccagtttgtg
gtggagaggaagagaaaagctggtggcgtgaaggagatgctgcagcatgcgaccaaactc
acactgaaaatacgcttcctcgtggaggagccccagcacacggttcccgacgtgtttgtg
tggttgctaagcaacaacaagcgcgttgcgtacgcccgcctccgtgccagagacctgttg
tactccagcagccgggaggcccgagggatccactgtggcaagatactgacactgttccta
aagcctccggggaagcgggtggcagacttgtcggtccaagccaaggtggacgtgtatctg
tggtacggacccagcgccgactccgtccacatgctggacgacctgcccgaagggttcagt
gcggccacaggggggggcgccgccgccgccagctgccctccagcagctctgctgtgtgcg
gagcagcacaccttccagttgcggtgccacatgtatcaggcccgcggcctcatcgccgcc
gacgcctccggcctctctgaccccttcgcccgggtcacctgtctgtcacacagccaaacc
accaacgtgatcagtcagactctcagtcccacctggaaccagtgtttgctgatgagccgc
ctgctgctgagcggagatctgcagcacatccgggaggagccgccgcgcgtcctcgtcgag
gtgtacgacgacgacgctctgagtaaggcggagtatctgggagccacggtggcggtgccc
gaggtccgcttggcctccgacccctacgcccccccgaccctgcagtacagcccgctgcac
tgcggcagccagccggggggagacctgctggccgccttcgaactgctgcaggtgggcgga
gcggccgcttggtttgcctgagggcggcgtggaatcactcacctgtctctctctgtgcag
gtgcacgagtccgcacaccagagtctgccgccgctggggaaacaggaaggaggcatctac
acggttcctgccaacatcagacctgttcttagcaccttcaggctggaggtgttattctgg
ggtatgagggagctgaagaaggttcagctgctatctgttgatcgcccacaggtcttcatc
gagtgtgcaggtaaaatattgcgttcctccgtcattcagaagtacaagtccaacccaaac
ttccccacgctggtggacgccatagagctggagctgccggagaacgaacacctccacccc
cctctcagcatcaccgtcgttgactggcgggccttcggtcgcagcacgttggtcggaaac
cacgtcatcaacaacctcaaggccttcaagtacaccccccctccggccctgcccgccccc
gcaccgacggcccccccgccaaagcgcacagagccaccgggaccctccgcacccccagag
ccaggactgtacccgtctgccggagacaccactttgactgccccgctaaccaatcaagac
ttcctcatcactgtggagggcgaaggccccgcgcctccgcctgcacccgcacctccaccc
gcacccggggaggacctcaagaagaccaggggcggcgcggcgaagagcacccgggggcgc
tccaccaagcggaagaagcggaccatcgctgacgagtcggcggagtgtgtcatcgactgg
tggtcaaagtactacgcctcgagggagaaacaggacaaacaggacggctctcccttcccg
gaggtctttgataaagctctgccgtatcagggcttgctcagcgatggaattgactcctta
gtcggcggcgtctcggatggagacaagaagaagaaacaaaagggaaaaggaaccctggat
ccaaacctcggcccggcgaccaaattagccacactgaagctgtacaacaaggagctggag
gcagagttcggctctttcaatgattgggtgaacacgtacgagctgttcagggggaaggcc
agcgaggaagaaggggcgactgaggagagattggttggcaaattcaagggacgattctgc
ctctataagctgaacgaggacaacgcgcaggactgggacggagacgcggacgccggggac
ttcagagtcagcagaggaatcccccccaacggcctggtccaggtcctcatccgggtctac
atcgtctctgcgtctaaccttcaccctgccgatccggacgggaaggcggacccttacatt
gtcctccggctcggcaagaacgaaatcaaagaccgggacaactacatccccaagcagctg
aaccccgtgtttgggaggtcctttgagatgcaggcgacgctgcctcgggagtccctgctg
tcggtgatgatctacgactacgacctggtggggggggacgacctgatgggagagactcgc
atcgacctggagaaccgattctacagccgacacagagccacctgcggactccccaccgag
tacagcctagacggctacaacgcctggagagacggcctgaagccctcggagctgctgtcc
aagctgtgcagagaccacggcctggaggagcctctcttcagaccgggccgcatcagcgtg
gccgacaaggtgttcgtgggaaagacgtgcttcatgcacgaagacgagcccctggagtcc
tatgagcacctgtcgctgaaggttctgcatcgatgggctgagattccggccgtgggatgc
aagctggtcccggaacacatcgagaccagaaccctgttcaacaaggatcgtcctggcatg
gaccagggtcaggtccagatgtgggtcgacattttcccgatggacttgcctcccccggga
cctgcagtggacatttcccctcgtaaacccaaagggtacgagctgagaatcatcatctgg
aacacagaggacgtgatcctggaggacagcagcttcctgaccggccagcagtccagcgac
atctacatcaagggctggctgaagggtttggaggacgaccggcaggagaccgacgtccac
tacaactctctgaccggcgaggggaacttcaactggcgcttcgtgttccccttcagctac
ctgcccgccgagaaggtgatagtggtgagcaagaaagagcacattttctctctggataaa
tcggagcagaagcttcccgccatcctcagcctgcaggtgtgggacttcgagacgctctcc
tccgacgacttcctgggcacggtggagttggacctccacggtttcccaagaggggcgaag
acggcaaagtcgtgcaaggcggacatgttgactgaggggacggagaggatctccatcttc
cagcagaagagagcgagaggctggtggcccttcgtcaagtctggagagctgacggggaaa
gtggaggcggagttccatcttctaattgctgaggaggccgagaaaaatcccgtgggtcga
gctcgcaaggagccggagccgctgccgaagccaaatcgaccggacacgtccttctcctgg
ttcgtcaacccgttcaagtgtttcttccacttggtgtggcggagctacaagaagtacatc
gtcatcgcgctggtgctgctcatcagcgtgctgttcctcgcgctgctcttctacacgctg
ccgggagccatttctcagaagatagtcaacggctga
DBGET
integrated database retrieval system
