Pungitius pungitius (ninespine stickleback): 119228518
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Entry
119228518 CDS
T07626
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04217
Necroptosis
ppug04622
RIG-I-like receptor signaling pathway
ppug04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119228518 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119228518 (cylda)
04625 C-type lectin receptor signaling pathway
119228518 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119228518 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119228518 (cylda)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119228518 (cylda)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C67
119228518 (cylda)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119228518 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
119228518
NCBI-ProteinID:
XP_037344068
LinkDB
All DBs
Position
4:complement(20224468..20239815)
Genome browser
AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYIVIKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDVEDFGELEVDHINLVEDDQDFPPLEINSRVLVQTR
DGPERGTTIFCDLLPGNESLGYYVGVDMDNPIGDWDGLFGGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLQKHSFAPRGTNSEKSSSGQSKPKSKGLGHHCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSTSLSSDNKFHSLPFSL
NRKTGPVDNMNHGPLSLSVQSVMGEQAEPPSPAAPSSPRPSTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILENVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKTHRHGKLSV
PKELQDGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMSPEELHTLDPKSIQGQARRLLCDAYMCMYQSSTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacattgtcataaaggagtgtacggtggagaagcctccccagaagaccctgaggatc
ccccgcggcagtcttggccaggcctgccaggagcgcaacagcctcggcagaactctgccc
ccgtgcaagggcaaaaagagtctccgcgtcctggaccagaccaatgtggtgctgagcctg
gacgagcgggacgtcctggagctggacgagaagctggccgagctgctgttccccatcacc
aactgtgaggagcggtacgccctcctctgcaacaagtcgcggctggagcgcgtccgtgac
attgactgcggttcgaaggtgcgcgtccagctgcgctcgggcgatgaacctctgcccggt
gtggttcgcttcaagggctcgctgctccccgacagggccctctctgggatctggtttgga
gtggagctgctggaggagggccggggccagggcttcacggagggctcctaccagggccga
caacttttccgctgcgaggatgagtgcggcgtgttcgtggccctggacaagctcgaactg
tgggaggatgatgacgtggaagactttggcgagctggaggtggaccacatcaatctggtg
gaagatgaccaggacttccccccactggagatcaactccagggtcctggtgcagaccagg
gacgggccggagagaggcaccaccattttttgtgacctgttgccgggcaacgagagcctg
ggctactatgtgggagttgacatggacaatcctatcggagactgggacggtttgtttggt
gggaagttgctgtgtaattttgcaagtttggagcacacacgactcgtccccatctgcgac
gtaatgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgctcccaga
ggcaccaacagtgaaaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcattgtggaagtagaagcaagtctgaattttactatactttaaatggcagctctgtt
gatccccccgcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcccttaccgacacgccccctgacttcaaccagtcctccccgccctccaga
gccccgccctccacctcgctgtccagtgacaacaagttccactccctgcccttcagcctg
aacaggaagacggggcccgttgacaacatgaaccatgggcctctctccctttctgtccag
tcggtgatgggagagcaggccgagcccccgtcaccggccgccccttcctcgccgcgtcct
tcgacgccgccccgaggccagccgggtctggaggtgggctctctggtggaggtgaaggag
aacccacctctgtgtggtgtcatccgctgggtgggtcttcctcctggcctgctggagcct
ttggctgggctggagctggaagaagaatgccccggttgcactgacggcaccttcaaagga
acgcgctacttcacctgccccccaaagaaggccctgttcgttaagctgaagtgctgccgg
cccgactcccgcttcccgtccctgcatcactcctccaaccccatcgaacggtgcaactcc
atcgcatttggagggtacctaagtgaggtagtacacgagaacacgcctccccgcacagag
aacgacggtctggatgtcatggtaggaaaaaagaaaggcatccagggccactacaactcc
tgctacctggattcaaccctcttctgtctgttctccttcagctcggtactggacacggtt
ctgttgagaccacgctcaaagacagatgtggagtattacagagagacccaagagcttcta
cgcacagagatcgtcaacccgctgcgcatacatggttatgtgtgtgctactaaagtgatg
aagctgaggaggatcctggagaatgtagaagctgcctctgggtttacgtctgaagagaaa
gatccggaggagttccttaacatccttttccatcacatactgagggtggatccattgctg
aagctaaggtcagcaggacagaaggtccaggactgttacttctaccagatcttcatggac
aagaaggacaaagtgggagtccccaccatccagcagctcctcgagtggtcgttcatcaac
agcgacctaaagtttgcagaggctccctcctgccttatcatccagatgccccgctttggc
aaggacttcaaaatgttcaacaagatcttcccctcactagagttggacatcacagacctt
ctcgaagacacgccacgggagtgtcggatctgcggaggcctggcgctctacgagtgccga
gactgttacgaggacggggatatcacggcgggcaagattaaacagttctgtgaaaagtgc
aatacacaggttcacctccacccgaggaggaaaacccaccggcacggcaaactgtccgtc
cccaaggagctgcaagacggtacggggcggcagggcagtttcccccgccagaggatggag
ctgttcgccgtgctgtgcatcgaaaccagtcactacgtggccttcgtaaagtacggcagc
gcagactccgcctggctcttctttgacagcatggccgatcgtgacggggggcagaacggt
ttcaacatcccgcaggtgtctccctgtccggaggtggaggcctacctgaaaatgagccca
gaggagctgcacaccttggaccccaagagcatccagggccaggcccgacgcctgctgtgt
gacgcgtacatgtgcatgtaccagagctcgaccatgagcctgtacaagtag
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