Pungitius pungitius (ninespine stickleback): 119228546
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Entry
119228546 CDS
T07626
Symbol
si:ch211-214p13.3
Name
(RefSeq) nectin-1 isoform X3
KO
K06081
poliovirus receptor-related protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03266
Virion - Herpesvirus
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04517
IgSF CAM signaling
ppug04520
Adherens junction
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
119228546 (si:ch211-214p13.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119228546 (si:ch211-214p13.3)
04517 IgSF CAM signaling
119228546 (si:ch211-214p13.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119228546 (si:ch211-214p13.3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119228546 (si:ch211-214p13.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119228546 (si:ch211-214p13.3)
04090 CD molecules [BR:
ppug04090
]
119228546 (si:ch211-214p13.3)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
Nectin family
119228546 (si:ch211-214p13.3)
CD molecules [BR:
ppug04090
]
Proteins
119228546 (si:ch211-214p13.3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
C2-set_2
V-set
I-set
ig
Ig_2
Ig_VEGFR-1-like_5th
Ig_4
C2-set_3
C1-set
Motif
Other DBs
NCBI-GeneID:
119228546
NCBI-ProteinID:
XP_037344160
LinkDB
All DBs
Position
10:complement(11702646..11729023)
Genome browser
AA seq
376 aa
AA seq
DB search
MDDSRVARFLVWTTSILSTVVEAQQVIGGNVNVVQGGTAILPCKLIDAKDPLTQIAWRKK
PWEDNFILINPTIGMKFINGVDKRFEFFGDVGDYNGSLRFSNITLRDEGTYKCVFTLFPN
GNVQTEILLNLLVPPVTSLEDNRPILGNEEVPLVTCKAAGSKPAAEVRWLKGTLGEEVRE
TTNVTRHDNGTTTTVSSLSGVPSREIHGHFIECIVTNAALSQEERLPFNIQIYFSPIEVN
ISKKSEDAFQCLTEANPHADITWSRSDHSRLQSTVKVEGAMLRFGSMTSDLNGLYQCEAS
NLYGRKHSFIYVHVTSEACSACWTLFGILIIVILVGVPALCYMYKTGKFLRTGEDTHGET
GTVQELEGLEAEGACG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcacgagtcgcgaggtttttagtgtggactacatccatcctgagcacagtt
gtagaagctcaacaggtgattggaggaaacgtgaacgtggtgcaaggagggacggccatc
ttgccgtgcaaactcatcgatgctaaggaccccctcacacagatcgcatggaggaagaaa
ccctgggaggacaatttcattttgattaaccctacaattggaatgaaattcatcaacgga
gtggataaacgatttgaattttttggggacgttggtgactacaatggatcactacgattt
tcgaacatcactttgagagatgaaggcacctacaagtgcgtcttcactttgttccccaac
ggaaatgtccagacggagatacttctaaacttgcttgtgcctccggtcacaagccttgag
gataatcgtcctattttgggtaatgaagaagttcccctcgttacgtgcaaagcagctggt
tccaagcctgctgcagaggttcggtggctcaaaggtactttgggagaagaagtgagggaa
acaactaatgtcacccgtcatgacaacggtacgacaaccacagtcagctcgctgtctgga
gtgccgagcagagaaatacacggtcactttattgagtgtatcgtcactaatgcagccctg
tcacaagaggagaggctgcctttcaacatccagatctacttctcacccattgaagtgaac
atcagcaagaaatcggaggatgcatttcaatgtttgactgaagccaacccacatgcagat
attacctggagcagatccgaccattctaggcttcagtctactgtcaaagtagagggtgca
atgctacggtttgggagcatgacctcggacctgaatggcctctatcagtgtgaagcgtct
aacctatatggaagaaagcacagtttcatctatgtgcatgtgacttctgaagcctgcagt
gcctgttggaccttatttgggattttgatcatcgtgatcctcgttggagtccctgctctg
tgttacatgtacaagacggggaaatttctaaggacaggggaggacacgcatggagagacg
gggacagtccaagaattagagggactggaagctgagggagcttgtggataa
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integrated database retrieval system
