Pungitius pungitius (ninespine stickleback): 119228550
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Entry
119228550 CDS
T07626
Symbol
celf6
Name
(RefSeq) CUGBP Elav-like family member 3-B isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119228550 (celf6)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119228550 (celf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Peripla_BP_4
Motif
Other DBs
NCBI-GeneID:
119228550
NCBI-ProteinID:
XP_037344178
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Position
4:18990573..19102357
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AA seq
492 aa
AA seq
DB search
MATVTANGVQQENGFSTTNSAGRMNGLTIGQNTIPMKDHDAIKLFIGQIPRNLEEKDLKP
LFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKP
ADSEGRGEDRKLFVGMLGKQQGEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSH
AEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFSPMTIQFGAYG
AYSHAVSLSPAGEETQMMQQQAALMAATQGSYLNPMAAIAAAQMQQMAAFNVNGLVATPM
TPSSGTSTPPGISATAVPSIATPIGVNGFSTLPPQSNGQPNSEPIYTNGIHPYPAQSPTV
ADPLQQAYAGVQHYAAAYPAAYAPISQAFPQQPTIIPQQQREGPEGCNLFIYHLPQEFGD
AELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQIGMKRLKV
QLKRPKDANRPY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtcactgcaaacggagtgcagcaagagaatggattcagcaccacgaacagc
gccggcaggatgaacgggctcaccatcggccagaacaccattccgatgaaggaccacgac
gccatcaagcttttcatcgggcagattcccagaaacctggaggaaaaagacctgaaaccc
ctgtttgaggaattcggaaagatatacgaactcactgtactgaaagacagatttacggga
atgcataaaggatgtgcctttctaacatactgtgccagagagtcagcactgaaggcccag
agcgccctccatgaacagaagactctgccagggatgaaccgacccatccaggtaaagcca
gccgacagcgaaggacgaggagaagacaggaagctgtttgtcggaatgcttggcaagcag
cagggtgaggacgacgtccggcggctgtttgagaccttcggccagatcgaggagtgcacc
gtcctgcgagggcctgatggggccagtaagggctgcgccttcgtcaagttctccagccac
gcagaagcgcaggccgccatcaacagcctgcacggtggacagactatgcctggtgcctcg
tccagtctggtggtcaaatttgcagacactgataaggaaaggaccctgcgcaggatgcac
cagatggcaggccagcttggcatcttcagtcccatgactatccagtttggggcctatggc
gcctactctcatgctgtaagtctcagcccggcgggggaggagacgcagatgatgcaacag
caagcagccctgatggcagcaacacaaggctcctacctgaaccccatggcagcaattgct
gctgcgcaaatgcaacaaatggcagctttcaatgtcaacggcctggtggctactcccatg
acaccgtcctcaggcaccagcacaccccctggcatctctgccacagctgtgccaagcata
gccacccctattggggtcaacggattcagcactctccctcctcagagcaacgggcagccc
aactctgagcccatctacaccaatggtattcacccttacccagcacagagtccaacagtg
gccgaccctctccaacaggcttacgctggcgtccaacactacgcagcagcctaccctgcc
gcctatgcgccaatcagccaagcgttcccccagcaaccaaccatcattccccagcaacag
agggaagggccagagggttgcaacctgtttatttatcacctgccgcaggagttcggggat
gcagagctcatgcaaatgttcctgccttttggtaacgtcatctcggccaaagtctttgtg
gaccgagcgaccaatcagagcaaatgtttcggctttgtgagttttgataacccgtccagt
gctcaagccgcaatccaggccatgaacggctttcagataggcatgaagaggctgaaggtg
cagctaaagcggccaaaggatgccaaccgaccttactga
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