Pungitius pungitius (ninespine stickleback): 119228562
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Entry
119228562 CDS
T07626
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119228562 (lcmt2)
Enzymes [BR:
ppug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
119228562 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
119228562 (lcmt2)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119228562 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_6
Kelch_2
Kelch_1
Kelch_3
NANM
RAG2
Motif
Other DBs
NCBI-GeneID:
119228562
NCBI-ProteinID:
XP_037344203
LinkDB
All DBs
Position
10:2020823..2025503
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AA seq
665 aa
AA seq
DB search
MPTSNRKQQGKDSAVQGTNDSSVVSKLSAAARGYFHDDFLRHLVCKEARRAPLVNRGYYV
RWKAVDCCVRRFLHVTKNCPLRQILSLGAGFDSAYFRLHADEALDGAVMFEVDFPDVSRR
KAALIASNATLRDALEPGSPPPAGPVHVSSRQYQLIGVDVREESRVEEALGAAGLDRTAP
TLVLSEVVLTYMETQSSDAVISWASRLLPRSLFVVYEQMRPGDPFGRVMQTHFRKLNSTL
HGLRRYPDAAAQRRRFLDRGWEQCVCLDMNAFYLGMLPEEERRRVESLEPFDEYEEWHQK
CSHYFILTASRGPSMAQTLLTPAPAPSIVPSWSPAALSARPVALGVEGLGMASTPLSPGR
VLLTGGSARGGRGPVTRMLLRDEGGWRSVDVEPTVGLGVRLYHTATPLPGGGVVVFGGRS
SPLNPVRALMRVTPDALGPPATGKLCVEPMVCTGEPPAPRWRHTATAVRHKGKSFLFVFG
GKNESEAALSDSGFLSVDQQHWTQVPVEGAAPEARHSHSACSYRGGVVVFGGLDRRGVPL
GGPAVLRPTDGGFSWERVEVRPPVVPRYSHSAHVVGHRLVVVGGVWLHSDGVPGVAVVDL
SARSSAEFRLDTSSVPWPLMLHSFCSELSDPEEPQLLLVGGGGNCFSFGTHFNLQPVTVD
LRPAT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgtcaaacagaaagcagcagggaaaggactccgcggtacaggggaccaacgac
agcagcgtggtgagcaagctgtccgcggcggcgaggggctacttccacgacgacttcctc
cgacaccttgtgtgcaaggaggcccggagggccccgctcgtcaacaggggttactatgtg
cgctggaaagccgtggactgctgtgtgcgacggttcctgcacgtcaccaagaactgcccc
ctgagacagatcctgtctctgggggcggggttcgactcggcgtatttccgcctgcacgcc
gacgaagccctggacggggcggtcatgtttgaggtggacttccccgacgtcagccgccgc
aaagccgccctgatcgcctccaacgccacgctgagggacgcgctggaacccggctcgcct
ccccccgcgggaccggtccacgtgtccagccgtcagtaccagctgatcggggtggacgtc
cgagaggagtcccgggtggaggaggctctgggtgcggctggtctggaccgcacggccccc
accctcgttctctccgaggtggtgctcacctacatggaaacgcagtcgtcggacgccgtc
atcagctgggcgtcgaggctcctgccgcggtcgctcttcgtcgtgtacgagcagatgcgt
ccgggcgaccccttcggccgggtcatgcaaacccatttccgcaagctgaattcgacgctg
cacggccttcggcggtacccggacgccgcggcgcagaggcggcggttcctggaccggggc
tgggagcagtgcgtgtgtctggacatgaacgccttctacctcgggatgctccccgaggag
gagagacgcagggtggagagcctggagccgtttgacgaatatgaggagtggcaccagaaa
tgttcacactacttcatccttactgcctcccggggcccctcgatggctcagacgttactc
acccctgctccagccccctccattgtcccctcctggagccccgcggcgctcagcgctcgg
cccgtggcgcttggcgtggagggtctggggatggcttccaccccgttgagcccggggcgg
gtcctgctgacgggaggctcggccagaggaggcagggggccggtgacccggatgctcctc
agggacgagggcggctggagatccgtcgacgtggagccaacagtgggtttaggtgtccgg
ctctaccacaccgccacccctctccccgggggaggggtcgtggtcttcgggggccgctcc
tccccacttaacccggtcagggccctcatgagagtaaccccggacgccctcggccccccc
gccacagggaagctgtgtgtggagccgatggtctgtacgggagagccgccggcgccaagg
tggaggcacaccgccaccgccgtccgtcacaagggcaaaagctttctgttcgtgttcggt
ggaaagaatgaatcggaggcagcgctgagtgacagcggcttcctgagtgtagaccagcag
cactggacccaggtcccagtagagggcgcagcgccggaggcccgccattcccactccgcc
tgttcataccgggggggtgtggtggtgttcggagggttagaccgaaggggggtgccgctg
ggcggcccggctgtgctgcggccgactgacggaggcttctcctgggagagggtggaggtg
cggccccccgttgttcccaggtactcccactcggcccacgtggtgggccaccggctggtc
gtggtcggcggcgtctggctgcattcggacggcgtcccgggggtcgccgtggtcgacctc
agcgcgcgcagcagcgccgagttccgactggacacgagctcggtgccgtggcccctgatg
ctgcactcgttctgctccgagctgtcggacccagaggagcctcagctgctcctggtgggc
gggggaggaaactgcttctcttttgggactcacttcaacctgcagcccgtcactgtggac
ctcagacctgcaacctga
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