Pungitius pungitius (ninespine stickleback): 119228567
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Entry
119228567 CDS
T07626
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
ppug04144
Endocytosis
ppug04145
Phagosome
ppug04148
Efferocytosis
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119228567 (rab5b)
04145 Phagosome
119228567 (rab5b)
04137 Mitophagy - animal
119228567 (rab5b)
04148 Efferocytosis
119228567 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119228567 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119228567 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119228567 (rab5b)
04031 GTP-binding proteins [BR:
ppug04031
]
119228567 (rab5b)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
119228567 (rab5b)
Endosome - Lysosome transport
119228567 (rab5b)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119228567 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
119228567 (rab5b)
Exosomal proteins of colorectal cancer cells
119228567 (rab5b)
Exosomal proteins of melanoma cells
119228567 (rab5b)
GTP-binding proteins [BR:
ppug04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
119228567 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
119228567
NCBI-ProteinID:
XP_037344212
LinkDB
All DBs
Position
10:complement(2016523..2020662)
Genome browser
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGALPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETLERAKAWVKELQ
RQASPNIVIALAGNKADLSERRLVDYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggggagtgggggccgctccaacggcgcgctgccgcagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaagggacagttcgacgagttccaggagacgaccataggagccgcgttcctggct
cagtcggtgtgtctggacgacaccacggtgaagtttgagatctgggacacggcgggacag
gagcgctaccacagcctggctcccatgtactaccgaggcgcccaggccgccatcgtcgtc
tttgacatcaccaagccggagaccttggagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacatcgttatcgctctggccgggaacaaagccgacctgtcggag
aggcgactcgtggattacgaggaagcccagacgtatgcggaggacaccggcttgctcttc
atggagacctccgccaagacggccatgaacgtcaacgagctcttcctggccatcgcaaaa
aagatgccaaaaaccgacacccagaacccgacacacgcagcgcggcaccggggggtcaac
ctccaggaccccgacgcccactccacccgagcctgctgcggtggaaactaa
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integrated database retrieval system
