Pungitius pungitius (ninespine stickleback): 119228635
Help
Entry
119228635 CDS
T07626
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04382
Cornified envelope formation
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04518
Integrin signaling
ppug04810
Regulation of actin cytoskeleton
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119228635 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
119228635 (itga6a)
04518 Integrin signaling
119228635 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119228635 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119228635 (itga6a)
04810 Regulation of actin cytoskeleton
119228635 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119228635 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119228635 (itga6a)
04515 Cell adhesion molecules [BR:
ppug04515
]
119228635 (itga6a)
04090 CD molecules [BR:
ppug04090
]
119228635 (itga6a)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119228635 (itga6a)
Exosomal proteins of breast milk
119228635 (itga6a)
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin alpha subunits
119228635 (itga6a)
CD molecules [BR:
ppug04090
]
Proteins
119228635 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
119228635
NCBI-ProteinID:
XP_037344332
LinkDB
All DBs
Position
10:complement(6758895..6772152)
Genome browser
AA seq
1089 aa
AA seq
DB search
MPPPQPGRAAAAAVCVALLFFSHFLEPTLVLAFNLDTAHVIRKDGEPGSLFGFSLAMHRQ
LNPDKRMLLIGAPRARALGKQTANITGGLYKCEMTQSPNCERVEFDNEEDVSVENKENQW
MGVTVQSQGPGGKIVTCAHRYQKRLYVNTPLEYRDITGRCYVLSQDLTIDPHSDEDGGNW
NFCKGRRRGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLIEMEMY
DDGPYEVGEELVPVPANSYLGFSLDSGHGITRGGGLTVVAGAPRANHSGAVVLLKKKSET
SSRLVVEHTLHGPGLASSFGYDVAVVDLNADGWQDIVVGAPQFYVKDGDVGGAVYVYVNQ
AGRWEQTTPVRLNGTKDSMFGLAVENIGDVNQDSYEDIAIGAPYADGGAGKVFIYHGSAL
GIQTGPAQILSGKAHNTRLFGYSLAGNMDLDSNSYPDVAVGSLSDTALIYRSRPVVSIRR
DVKISPKEIDLTTKTCGQSICFAVEACFTWKSNTASYNPRLTIGYSIEADGDRRKHGLTS
RVTFLNNPRTETDYQLNGTLDLRGQNQKSCIKMTAKLKDNIRDKMRSVPIEVSADIAGTK
PHKARNGLSQLMPILDSSQPSKDVIQVNFVKEGCGRDHVCRSNLKMEYKLYYKQSNLDVY
SPLPMSNRVPVFHLSYERKDLALRVTISNMNEDDAYEAKLVGTFPDTLSYSGVRSHEKTV
EKPIICTANVNGSQADCELGNPFKRDSKATFYIILSTVGMTLDTNKIDITLQLQTTSVQE
DIAPVKVKAKVIIELPLSVSGEASSNQVSFGGVVRGESAMKTEEEIGSLITYTFRINNLW
KSLTPSVKASLHIQWPKWSKDGKWLLYLVKITAAGPEDVRCSPESEINSLQHIQEASASR
TRREIGERKTVGRMSSLSDKKKVLTCDSEIGCVVLKCPLQGLDGTSLELRSRLWNSTFIE
DFASTPNLHIVVKASLVLHTGAKNMILRTPHTDVTVAVSPEGAVAQHTGVPWWIILVAVL
AGVLILALLVFLLWKCGFFKRSKRDDSVPRYHAVRIRKDSPDCQDGNVKLDPFDKKQWMT
NWMDSESYS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcagccgggaagagccgccgccgccgctgtgtgtgtcgctctcctattt
ttttctcactttctggagccgacgctggtgctcgcgttcaacctggacaccgctcacgtc
atcaggaaggacggagagccgggcagcctgttcgggttctccctcgccatgcaccggcag
ctcaacccggataaaagaatgctattgattggagcgcccagagcccgagctttggggaaa
cagacagccaacatcacaggaggcctttataaatgtgaaatgactcagtctcccaattgt
gagcgtgtcgaatttgataatgaagaggacgtaagtgttgagaacaaggagaaccagtgg
atgggggtgacggttcagagccagggacccgggggaaagatcgtgacttgtgctcatcgc
taccagaagcgcttgtatgtgaacacgcccctggagtacagggacatcacggggcgctgt
tacgtcctgagccaggacctgaccatcgacccgcactccgacgaggacggagggaactgg
aacttctgcaagggcagacgcagaggccacgaaatgtttggatcttgccaacaaggtttg
gccgccacctttaccaaggactaccattacgtggtgtttggggcaccgggagcgtacaac
tggaaaggcatcgttcgagtggagcaaaagaacaacactttgatagagatggagatgtat
gacgacggcccgtatgaagttggagaggagctcgtgcctgtgcccgccaacagctacctg
ggattctccctcgattcgggacacggcatcacgaggggcggaggcctgacggtggtggct
ggagctcccagagccaatcacagcggagctgtggtcctgttgaagaagaagagcgaaacc
tcctccaggctggtggtggagcacacgctgcacgggccgggactggcgtcctcgtttggc
tacgacgtggccgtggttgacctgaacgctgacggatggcaagacatcgtcgtgggagcc
ccccagttctacgtgaaggacggagacgtcggaggcgctgtttacgtctacgtcaaccag
gcaggaaggtgggaacagaccacacctgtccgtctcaacgggaccaaggactccatgttt
ggactggccgtggaaaacatcggagacgtcaatcaagactcgtacgaagacatcgccatt
ggagctccttatgctgacggcggcgcagggaaagtcttcatataccacggctctgcactg
gggatccaaaccggccctgcacagatcctttcaggaaaagcgcacaacacgcggctcttt
ggatattccctggcagggaacatggacttggacagtaactcgtatccagatgtggccgtg
ggctccctgtcggacacagctctgatctacaggtcacggcctgtcgttagcatcaggagg
gacgtcaaaatatcgccaaaggaaatagaccttacaaccaaaacctgtggtcaaagcatt
tgcttcgcggtggaagcgtgcttcacctggaagtcaaacacggcgtcttacaaccccaga
ctaactatcggctactccatcgaggcggacggagatcgcaggaaacacgggctgacctcc
agagtgacgttcctcaacaacccccgcaccgagacagactaccagctgaacggcaccttg
gacctccgcggccaaaaccagaagtcctgcatcaagatgaccgccaaactaaaagacaac
atcagggacaagatgcgcagcgtccccatcgaggtgtctgcagacatcgcggggaccaaa
ccacacaaggcgaggaacggcctctcgcagctgatgcccatattagactcctctcaacca
agcaaagacgtcattcaggtgaactttgtgaaagagggatgtggaagggatcatgtttgc
cggagtaacctgaagatggagtacaagctgtactacaaacaaagcaacctggacgtgtac
tccccactgcccatgagtaacagggtcccggttttccatctgagttacgagaggaaggac
ttggctctgcgagtgacgatcagcaacatgaacgaagatgatgcttacgaggcaaagctg
gtggggacgttcccggacacgctgtcttattctggggtccgctcgcatgagaaaacggtg
gaaaagccaatcatctgtacagccaatgtgaacggctctcaggcagactgcgagctggga
aatccttttaagagagactcaaaggctacattttacatcatcctcagcactgtgggcatg
actctcgacactaacaagattgacatcaccctgcagctccaaacgacaagtgtgcaagaa
gacatcgcccctgttaaagtgaaggctaaagtaatcattgaattgccgttgtcagtcagt
ggggaagccagctcgaaccaggtttcctttggaggtgtcgtgagaggggaaagtgccatg
aagacagaagaagagattggaagtttgattacttacacattcagaataaacaatctgtgg
aagtctttgacgccttctgtcaaagcctcacttcacatccagtggcccaaatggagcaaa
gacggtaaatggctcctgtacctggtgaagatcaccgctgcagggcccgaggacgtccgc
tgctctcctgagtctgaaatcaactccctccaacacatccaggaggcctccgcgtccaga
acaaggcgggaaattggagagagaaagactgttggcagaatgtcgtcgctgtccgacaag
aagaaggtgttgacatgtgacagtgagatcggatgcgtggtgctcaagtgccccctacag
ggcctcgacggaacatcactggaactcaggtcccgtctgtggaactcgacctttattgag
gatttcgcctccaccccaaacctgcacatcgtggtgaaggcctccctcgtcctccacacg
ggggctaagaacatgatcctgagaactccccacacggatgtgacggtggccgtgtcccct
gaaggtgcagtggcgcagcacactggagttccctggtggatcatactggtggccgtgctc
gcaggcgtcttgatcctggctttgttggtgtttctgctctggaagtgtggattcttcaaa
cgctccaagcgagacgacagcgtcccgcgttaccacgcagtgcggatcaggaaggactcc
cccgactgccaggacgggaacgtcaagctcgatccctttgataagaagcagtggatgacg
aattggatggacagcgaaagttactcgtga
DBGET
integrated database retrieval system
