Pungitius pungitius (ninespine stickleback): 119228637
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Entry
119228637 CDS
T07626
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119228637 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119228637 (nup62l)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119228637 (nup62l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
119228637
NCBI-ProteinID:
XP_037344341
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All DBs
Position
10:6756051..6758683
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AA seq
581 aa
AA seq
DB search
MSGAFNFGQASTGFSFGAQKPAVPGPGTGFGMSSAVPPAAGGGFAFGTPTQATTAPNPAG
SFSFGTPAKSTAAGGGFSFGTPTNTFGMVAPQAAATAAIAAAPQGLTMGTAAAPAAGSGF
TLGSGLSAPTAAVAPAGGGFSFGTPSQAQPQLAVQPQPAAPPPTAAATATTGAGGLSFGG
FSFGATKAQATTTAAPVAAPTAAQGGGFSFGASAPSSLSMGMQPQSAPAAAVAPSQGGGF
AFGIKPSSTPAPPVSTQAATAGGASLFASPIPTAAATATAAAATVTASSTGAGFTLGVAP
TLAASTAAATTAAPGGGLSFMLKPLGAATSASAPVPAPTATVAAAAAAASTGAATAFTLG
LKHSTASSIATASTASTISAAAAPPVMTYAQLEGLINKWSLELEDQERHFLQQATQVNAW
DRMLVENGEKITSLHKEMEKVKLDQRRLNQELDFILSQQKELEDLLCPLEESVKEQSGTI
YMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTSDPLQQICKILNTH
MDSLQWIDQNSVLLQRRVEEVSKLCDNQRKEQEKTFRLTFD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgctttcaactttgggcaagccagcacgggcttctctttcggagctcagaag
cccgcagtcccggggcccggcacgggcttcgggatgtctagcgccgtaccccctgccgct
ggagggggcttcgcatttggcactcccacgcaggccaccaccgcccccaacccggccggc
tccttcagctttggtaccccagcaaagagcacagcagccggcggaggcttctcattcggg
acccccaccaacacattcggcatggtcgcccctcaggccgccgcaacagcagcaatagca
gcggcgccacaggggctgactatgggcaccgcagcagctcccgctgcggggtctgggttc
actctgggatcgggtttgtcagccccgaccgccgctgtcgctcctgcgggagggggcttc
tcctttggcacgccgtctcaagctcaaccccaactcgcggttcaaccccaaccggcggca
ccaccaccgaccgccgcggcgacggcgaccaccggggcgggcggcctctcattcggaggg
ttcagcttcggagcgaccaaggcccaggcgaccaccactgcagcccccgtggctgcacct
actgctgcccagggaggaggcttcagctttggcgccagtgccccgtccagcctcagcatg
ggcatgcagccgcagtcagcacccgctgccgcggtggcgccaagtcagggtggaggattc
gcctttgggatcaaaccctcgtccacgccagctccccccgtctccacccaggcagccaca
gctgggggcgcgtcgctcttcgcttcacccatccccacagccgccgctaccgccaccgct
gctgccgccaccgttaccgcctcttcaacaggtgcgggctttactctgggtgtagctccg
actttagcggcaagcaccgctgccgcgaccactgcagcccccggtggaggtctgtctttt
atgctcaaacccctgggggcagctacctccgcctcggccccggtccctgcccccaccgct
acggtagcagcagcagcagccgccgcctcaacgggggccgcgacggccttcacgctgggg
ctcaagcactcgaccgcctcaagtatcgcgacggcttccacagcctcgacgatctctgca
gccgctgctcctccagtgatgacgtacgcccagctcgagggtctcattaacaagtggagt
ctggagctggaggaccaggagagacatttcttgcagcaggccacccaggtgaatgcgtgg
gaccgcatgctggtggagaacggggagaagatcacatccctgcacaaggagatggagaag
gtgaagctggaccagaggcggctgaaccaggagctggacttcatcctgtcccaacagaag
gagctggaggacctgctgtgcccgctcgaggagtctgtgaaggagcagagtggaaccatc
tacatgcagaacgcggacgaggaacgcgaaaggacgtacaagctggcggagaacgtggac
gcccagctgaagaggatgtcgcaggacctgaaggagatcatcgagcacctgaacacgtcc
agcggcccggccgataccagtgacccgcttcagcagatctgcaaaattctcaacacccac
atggattcacttcagtggatcgatcagaactctgttctcctccagagaagagtggaagaa
gtgtctaaattgtgtgacaaccagcgcaaggagcaggagaaaacctttcgtctgacattt
gactga
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