Pungitius pungitius (ninespine stickleback): 119228722
Help
Entry
119228722 CDS
T07626
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04517
IgSF CAM signaling
ppug04518
Integrin signaling
ppug04672
Intestinal immune network for IgA production
ppug04810
Regulation of actin cytoskeleton
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119228722 (itga4)
04514 Cell adhesion molecule (CAM) interaction
119228722 (itga4)
04517 IgSF CAM signaling
119228722 (itga4)
04518 Integrin signaling
119228722 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119228722 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119228722 (itga4)
04810 Regulation of actin cytoskeleton
119228722 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
119228722 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119228722 (itga4)
04515 Cell adhesion molecules [BR:
ppug04515
]
119228722 (itga4)
04090 CD molecules [BR:
ppug04090
]
119228722 (itga4)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119228722 (itga4)
Exosomal proteins of other cancer cells
119228722 (itga4)
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin alpha subunits
119228722 (itga4)
CD molecules [BR:
ppug04090
]
Proteins
119228722 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF11
DUF1820
ARM_KNTC1_2nd
Motif
Other DBs
NCBI-GeneID:
119228722
NCBI-ProteinID:
XP_037344507
LinkDB
All DBs
Position
10:18331000..18354762
Genome browser
AA seq
1029 aa
AA seq
DB search
MHPFACSSLVLVLVLLLVQVLKHPAAGYNLDMEHSLEFSGPSSSMFGYSVLLHRHGAHRW
LVVGAPVANSSSSPSVQSPGALYRCNVTDVSRRCHPMRADVRQCGKTCDAESDHQWLGVS
LSRQPGVDGGHILACAHRWKNVFYSKKDSQNHKLPNGVCYRYGNDLGHARPIIPCYRDHQ
RKFGEDYGSCQAGISNFLTEDLIIMGAPGSSYWTGSVLVFNTSSRAMSVYLDDEAGAVSF
GSYLGYAVGAGSFLGPGTKEVVGGAPQYNQKGKVFIFTVETNMLRVVSEVSGRELGSYFG
SSVCAVDLNADGLSDLLVGAPMATGATREEGRVHVYINQGNAKLLEAGFQLSGSDAYAAR
FGETIADLGDLDDDGYPDVAVGAPQEDDLKGAVYIFNGREEGISPTPSQRITGSSLGRNL
RMFGQSLSSGIDIDDNGYQDVAVGAFLSDSAVVLRTRPVIQVKASLILPEEIDQQVTLCK
EHQTPTVCFNVTVCFSVKSRHFRGAIALQYNLTSDLLHKPSFPHRFYFHGNGSSNSTKGR
VIAKQGQLTCTTHMAHQRKDVKDIFTPVKFEVSYSHRETNTHKTSSKTFPPLKPILQQSA
GHLNTITNQTWFARSCSLVNCSTNMQLSAQLVLQHQQNYFALGSGQTIMLKTSLLNSGDD
AFLPRLTLRFPDNIQYIKVLQNQDNVVSCDVTQEVNTTLAGVDCSVTSLLLPANARLNIS
FLLDVSQNSTPGDVPVHVNIRSDNYEKEDYLRDNSVSLVLPLKYGVNINIHGFVTPTSFV
FGDEDTTLVDCYTERFNYTYKVLNSGPSRSVDTVVDITLPKILTPYRHRLLQVVDWQSSH
GVCSISDTTVSVLEDCEVPQASFIKQLIFFFSSSSTRRMFCGRGDQLCERLVCRLGNLEA
GRDALIQLEITLNPAVLLQAPGRHSVMRLESTATMSNPTGGLHTILITEQPAAQVVVEAL
FTQKPSTTVKVFIVVVSLVLGLTILAALIWCLWKAGFFKREFQKKEEEEELKRDSWDYVP
KNNKRESYS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcacccctttgcgtgcagcagcctcgtcctggttctggtcctgctcctggttcaggtc
ctgaaacatcctgctgcagggtacaatctggacatggaacacagtctggagttcagtggc
ccatcctcgtccatgtttggatactcggtcctgctgcatcgccacggagcccatagatgg
ttggtggttggagccccggtggcaaactcatcctcgagtccgtccgttcaatctccagga
gccctgtaccgctgtaacgtcaccgacgtgtcccgccgctgccaccccatgcgcgccgat
gttcggcaatgtggaaagacgtgcgatgcagagagtgatcaccagtggctcggtgttagt
ctgtccagacaacctggagtcgacgggggacatatcctggcgtgtgctcaccgctggaag
aacgtcttctactcaaagaaagacagccagaaccacaagctgccgaacggagtttgttat
cgctacggaaacgacctgggacacgcccggcccatcataccctgctacagagaccatcag
aggaagttcggtgaggattatgggtcgtgtcaggcgggcatttccaacttcctgacagag
gatctgatcatcatgggggccccggggtcgtcttattggacgggttcggttctggtgttc
aacacgtctagcagggcgatgtcggtgtacctggacgacgaagctggagccgtcagcttc
ggaagctacctaggttacgctgttggagccggctcctttttgggtcccggcactaaggag
gtggtgggtggagctccgcaatacaaccagaagggcaaggtcttcatcttcaccgtggaa
acaaacatgctgcgagtcgtctctgaggtgtctggaagagagctgggatcttacttcggt
tccagcgtgtgcgcggtggatctgaatgctgatggtttgtcagatctgttggtcggcgct
cccatggcaacgggcgccacgagagaggaaggaagagtccacgtgtacatcaaccagggg
aatgcaaagctgctggaggcgggatttcagctgagtggcagtgatgcctacgccgcccgg
tttggagagaccatcgccgacctgggagacttagacgacgacggttaccccgatgtggcc
gttggcgccccacaggaagacgatctaaaaggagccgtctacattttcaacggcagggag
gagggaatctcgccaactccatctcagaggattactggatccagtctgggtcgtaacctc
aggatgtttggccagtcgctgagctctggcattgacatcgatgataacggctaccaagat
gtggcggttggtgctttcctctcagactctgccgtggttctcaggacccgtcctgtgatt
caggtaaaggcatccctgattctgcccgaggaaatcgaccagcaggtgacactgtgtaaa
gaacaccagactccaactgtctgcttcaacgttaccgtctgcttcagtgtcaagtcaaga
cacttcagaggagctatagctcttcaatataatttgacctctgacctgctccataaacca
tccttccctcatcgtttctatttccatggcaacgggtcatccaatagcacaaaggggcgt
gtgatagccaaacaaggccagctcacttgtacaacccatatggctcaccaaaggaaagat
gtgaaagacatttttactccagtcaagtttgaggtttcttatagtcacagagaaacaaac
acccacaaaacctcttccaaaaccttcccgccattgaaaccaattcttcagcagagcgca
ggacacctgaacactatcaccaaccagacctggtttgctcgttcctgttcactggtgaac
tgttcgaccaacatgcagctgtctgctcaacttgttctgcaacatcagcagaattacttt
gccctcggctccggacagacgatcatgttgaaaacctcgctactgaactctggagacgat
gccttcctgccgcgactgacgctgcgtttccccgacaacatccaatacattaaagtattg
cagaaccaggacaacgttgtcagctgtgatgtcacgcaggaagtcaacactacgctggca
ggtgtggactgcagcgtcaccagccttctcctccctgccaacgccaggttgaatatcagc
ttcctattggacgtaagccagaacagcacacctggtgacgtccctgttcacgtcaacatt
agaagcgataactacgagaaggaagattatctccgtgacaactcggtcagcctcgtcctt
cctctcaaatatggagtcaacattaacattcatggttttgtgactcccacctcatttgtg
tttggagatgaagacacaactctggtcgactgctacactgagagattcaactacacatac
aaggtgttaaactctggccccagcaggtctgtagatactgtggtcgacatcacgctacca
aagatcctcacaccatacagacacagactgctgcaggtggtggactggcagtcgtctcat
ggtgtgtgttcgatcagtgacacgactgtctcagtcctcgaggactgtgaggtgcctcaa
gcttccttcatcaaacagctcatcttcttcttctcctcgtcctccacacgcagaatgttt
tgtggccgtggtgatcagctgtgtgagcggttagtgtgtcgcctcggtaacctggaggcg
gggagagatgccctaatccaactggagatcacgctgaaccctgctgtactactccaagct
ccgggtcgtcacagtgtcatgaggcttgagagcacagcgacgatgtcaaatcccacaggc
ggtctccacaccatcctcatcacagagcaacctgcagcacaggtggtggttgaagctctt
ttcacccagaaaccctcaacaacagtgaaagtcttcatcgtcgtcgtcagtttagttttg
ggtctgacgatcctagctgctctcatctggtgtctttggaaggctggtttcttcaagcgg
gagttccagaagaaagaagaggaggaggagttaaagagggacagctgggattacgtccct
aaaaacaacaaaagagagagctattcataa
DBGET
integrated database retrieval system
