KEGG   Pungitius pungitius (ninespine stickleback): 119228736
Entry
119228736         CDS       T07626                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppug03032]
    119228736 (rif1)
DNA replication proteins [BR:ppug03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    119228736 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4 STI1-HOP_DP
Other DBs
NCBI-GeneID: 119228736
NCBI-ProteinID: XP_037344540
LinkDB
Position
10:2430665..2443494
AA seq 2533 aa
MATAEPPSSSSSFLPLLESLEDVTTGPAEQTDAYLTIANLLSGDEYRQFLTAVERHFPRL
GTAILAHISSPTAELSQAALQALGFCVYHRRVVSAVPESFVAEILSALCSLVAKSTDKNT
CTRALWVISKQSFPADVVGQKAPSILGTLESVWSRGDIHSVVMEHEALNVIIRMLEQVPV
QMGEGALRWAKLVLPLVVHSAAKVRLRAAAALETGMPVLMEKQMEVAAIIEPMMSTKLVP
ELRKLFLAKNEANVLKLWPLFVKLFGKLLHRGGPFINSLLNLEELGFRSSSPAVKKIAFI
AWKSLIDNFALDPDILCSAKRVKLLMQPLTSINVRTEVLLLTKVEVWWYLVVQLGPNLAP
NFEQVSVPLLQCTIGSDPPLASGASSRAAGQNGSGTPGTPKTGFNSSVNTSRMSLNSSVQ
MATTFPSIQLLGLEMLLHYFLGPEVIATAAKKKLSLSLEPLSHSLFSGAPSFTKHAAGLT
ANIRDGFTNVGKDAPEALLGVLWTSLVRFVNLTIESGSKKDRHGGDVLTLMLQALQSIVV
SEALPADKVLILFEATVKGIPHRVLGSAAYQVGKMDVLNGTPALFLIVLLYNSSSLCAYM
EDERFFQCLQVLVGCGLSGPTSPLAFGEAVLGAIRRGAACVQNKEHLWRTWSAIVTPLTD
TITQSNEVNQGDALEHNFSAVNAALMFPITHLLHGSPLPQAAQKSMLSSWSKLYRVFARC
SALVVTAEENVCCEELCAKMAAAVDGDALVVPSTLNAVTSILQVMVECVDFSPFTPQFQQ
KLKSPHTPVNWTRKRNKVLGNLSTFQSLLVQCLEVYLGGAEASSEATGLALVAVMSALFT
NLALANTVRGALASLVRPLAVFYKQAAGEPPKFSSQLLGKLEKLLCDVLGCLQSRSALAY
DDELLALLSPLLCACFPHRNKQLRSAAAHFWNATFANAACLTYPDEIRPVLSHVKQKTPI
ILPGFEAVGVPDELSGPYSSESSQLEANLSGMPVSSSAARDALLKKAEPKACGAAAASKS
VSTKLDFGSPKPPPRGALEDEASIDFVFIPPEAKERVLTEHQKEVKRTKRVDIPVMYNNL
DASLDTTVFTQYTQSQEESLDKPAPGHADEETKEAPGEADLLTQVPQEEEDSKETQDFAD
PAAAEKTAADQQQQEEEEEEEVEEVIPESADVSMENAKSGDAADLDLQSPGGRSPNISGS
SDLVSGTPQKPNSRRQSFITLEKYAEGKPASPSSASTFTGTLRKPPSSRERSSRKSSSQA
SQASPGPSSQDSASSQTDDLNPQCPVSDALDSPVRPKDCRTKGEPVRLTERLPSDPTDEE
NVIPDTQAQTASSQEMKPSSQEEEEEESDATLDDSQSSQGEPRRSGRCRVRPLLPGEDPE
DREEKYKPLKRRRSGDGPKSDPATSSSPQSRRSTRSGQNPEGDGGRGRLRTRSQTDKRES
GPTGSQGRSSKRVKLYSASQDFLGPDPKDSQSQGRQRPRSKATEETAAEGGEMKAAGSLG
EERAAQTAKCTPEDGLEDESQELAAGRLTEKDGDERKCSQTTTCLEPQDVEMEEPTEEGK
QADPHTVTASSTQGGQESELLEKTSRGERASPADQEPEGGANVAKRLKKESEVKTSDDTD
DGLSQDGSPVITPSSEGRAVRRSRRSKVSSEEPADGGESKDLSGRPRPQPEAGIAGRTRR
SKVQEEPSRPRRSDRYLRGRSSPASPASSKESSESESSEVKEHLLEPKRRGRTPRASLPS
PLTTDSKEVARNKGTLDQENVPELEESQATQDWQESGGLSHHEEEGNEESRAEQEKGNNE
ESRAEQEKGNNEESRAEQEVNEESRAKEEGNNEESRAEQEVNEESRAKEEGNNEESRAGE
EVNEESRAKEEGNNEESRAKEEGNNEESRAEQEGNNEESRAEQEGNNEESRAEQGVNEES
RPEREVNEESRAKEEVNEESRAEEEVNEESRAEEEVNEESRAEEEVVNDDTKRSDWPGVS
SPTEQKASSSPSAAVLEPVGISSDPTRDSSVSSVEEAPPKETMEALRVSGSSEEKDEEVT
GTTTSEPEETLVGERPPFPPTGPDGPGEPAPGGWLASTMEALAVAPLELGHCAPQLEQHH
GRLACVAETRPDGSEWTPREAPVVPLEDAAEDRRVEGPLFSEEAAAESAPDDGGDATLQE
RESCGEGTSSASPAKQRELEALMAADVSGSPSSGRTRGTWSPSASPSTSILKKAPKRLQE
EEEEEEEEEEEAASPLVKSRRVSFANPIQHQELADDIDRRSPAVRTSSPRTSRGSGIPKY
VTTPTKGLLSTSPSRALHSPGYKSSKKCLISKMSQEPRPVSRDSVYPSLVGCSAPVEAVL
PQISSNMWSRGFGQLVRARNIKTVGDLSALTPGEIKTLPIRSPKISNVKKALRSYEMQRK
GRAGEELKSFEERETTSELEETGAPQNQDETSETLAEELLEERLPSATPAPDAAPGERGP
AGWLASAMGALGDVGPLELAHCSPQQLVELHGRLGGAMGQVVVELQRRLSQKEAGPQRGS
ASEASDTLMLEDS
NT seq 7602 nt   +upstreamnt  +downstreamnt
atggcgacggcggagcctccgagcagcagcagcagcttccttcctctgctggagtctctg
gaggatgtcaccaccggaccggccgagcagacggacgcctacctcaccatcgccaatctg
ctcagcggagatgaataccgacagttccttacggcagtggagaggcacttcccccgtttg
ggtacagccatcctggctcacataagcagcccgaccgcggagctgagccaagcggccctg
caggctctggggttttgtgtgtaccaccgtcgcgttgtctcagcagtgcccgaatccttt
gtggcagagatcctgtcggcgctttgctccctggtggcgaagtcaacggataagaacacg
tgcaccagggccttgtgggtcatctccaagcagagcttccctgcagatgtggtcggccaa
aaggcgccgtccatactgggaacgctggagagcgtgtggagcagaggggacatccattcc
gtggtgatggagcacgaggccttaaacgtcatcatcagaatgctggagcaagtcccggtc
cagatgggcgagggagcgctgaggtgggcgaagctcgtcctcccgctggtggtgcactcc
gccgccaaggtgcgtctgcgggcggcggcggccctggagacggggatgcccgtcctcatg
gagaagcagatggaggtggccgccatcatcgagccaatgatgtccacaaaactggtccca
gagctgcgaaagctgtttctggccaagaatgaagcaaacgtcctgaagctgtggccgtta
ttcgtcaaactgttcgggaagctgctgcacagaggaggtcctttcatcaacagcctgctg
aacctggaggaactcggcttccgcagctcctcgcccgccgtcaagaagatcgccttcatt
gcctggaagagcctcatagacaacttcgccctggatccggacatcctgtgcagcgccaaa
cgcgtgaagctgctgatgcagcccctcacgtccatcaacgtgcggacggaggtcctgctg
ctcaccaaggtggaggtctggtggtacctggtggtccaactcgggcccaacctggcaccc
aactttgagcaggtgtctgtgccactgctgcagtgcaccatcggctccgacccccctttg
gcctctggcgcctcgtctagagcagccggtcagaacggctccggcacacccggcacgccg
aagaccggcttcaacagttcggtcaatacgtctcggatgagcctcaactccagcgtacag
atggccaccaccttcccctccatccagctgctgggcctggagatgttgctccactacttc
ctgggaccggaggtcatcgccacggcagccaagaagaagctcagcctgagtctggagcct
ttgagccactcgctcttctccggcgctccctcgttcaccaaacacgccgccgggctcacg
gccaacatccgcgatggattcaccaacgtcggcaaagacgctccagaagctcttctgggc
gttttgtggaccagcctcgtccgcttcgtcaacctgacgatagaatctggcagtaagaag
gaccgccacgggggcgacgtgctgacgctgatgcttcaggctctgcagagcatcgtcgtc
tcagaagctctgcctgcagacaaagtgctgatcctgtttgaagccacagtgaaagggatt
ccccacagagtcctcggctccgccgcctatcaagtgggcaagatggacgtgctgaatggg
acgccggctctctttcttattgttctgctgtacaacagcagctcgctctgcgcctacatg
gaggacgagaggttcttccagtgccttcaggtcctggtgggctgcggcctgtcgggcccc
acctccccgctggcgtttggggaggcggtgcttggcgccatccgccgcggcgccgcctgc
gtgcagaacaaggagcacctgtggaggacgtggagcgccattgtcactccgctcaccgac
accatcacgcagtctaatgaagtgaaccaaggcgacgctttggagcacaacttcagcgcc
gtgaacgccgccctgatgttccccatcacgcacctcctacacggctcgccgctcccgcag
gcggcccagaagtcgatgctgtcctcgtggtccaagctgtaccgagtgttcgcccgctgc
tcggcgctggtggtcacggccgaggagaacgtctgctgcgaggagctctgtgccaagatg
gcggccgcggtggatggcgacgccttagtggttccctccacgctgaatgccgttaccagt
atcctgcaggtcatggtggagtgtgtggacttctcgccgttcaccccccagtttcagcag
aagctgaagtctcctcacacgcccgtgaactggacgaggaagcggaacaaggtcctgggg
aacctgtccaccttccagtccctgctggtgcagtgcctggaggtctacctggggggcgcc
gaggcgtcctccgaggccacggggctggccctggtcgccgtcatgtcggccctcttcacc
aacctggcgctcgccaacaccgtgaggggagcgctcgcctcgctcgttcggcccctcgcc
gtcttctacaagcaggccgccggcgagccgcccaagttctcctcgcagctcctgggaaag
ctggagaagctcctgtgcgacgtcctcggctgcctgcagagccgctcggctctggcctac
gacgacgagctgctggcgctgctctccccgctgctctgcgcctgcttccctcacaggaac
aagcagctgcgctccgcggccgcgcacttctggaacgccaccttcgccaacgccgcgtgc
ctcacttaccccgacgagatcaggcccgtgttgagccacgtgaagcagaagaccccgatc
atcctccccggcttcgaggcggtcggcgttcccgacgagctcagcgggccgtactctagc
gagagctcccagctggaggcgaacctcagcgggatgccggtgtcgtcctcggcggcgagg
gacgcgctgctgaagaaggcggagccgaaggcctgcggcgccgcggcggcctcgaagtcc
gtttctaccaagctggactttggctcccctaagcctccccccagaggagctttggaggac
gaggcctccatcgactttgtgttcattcctccagaggcgaaggagcgcgttctgacggag
caccagaaggaggtgaaaaggactaaaagggtggacatccccgtcatgtacaacaacctg
gatgcctccctggacaccacggttttcacccagtacacccagagtcaggaggagtctcta
gacaaaccggcaccgggacacgctgacgaggaaaccaaagaggctcctggcgaggcggat
ttgctgacgcaggttcctcaggaggaggaagactcaaaggagactcaagactttgccgat
ccagcagcagcagagaagactgcagcagaccagcagcagcaggaggaggaggaggaggag
gaggtggaggaggtgatccccgagtcggcggatgtttccatggagaacgccaagagtggt
gatgcagcagacctggacctccagtctccaggaggcaggagtccgaacatctctggctct
tccgatttggtctcggggacgccccagaaacccaacagccggcgccagtccttcatcacg
ctggagaagtacgcagagggaaaacctgccagccccagcagcgcgtccaccttcacgggt
accctcagaaaaccccccagcagccgagaacgctccagcaggaagtcgtcctctcaggct
tcccaggcgtcccctggtcccagctctcaggactccgcgtcctcccagacagacgacttg
aacccgcagtgtcccgtgagcgacgccctcgattcccccgtgaggcccaaagactgcagg
accaaaggtgagccggtgaggctgaccgagaggctgcccagcgacccgaccgacgaggag
aacgtcatcccggacacccaggctcagacggcttcctcacaggagatgaaaccctcaagc
caggaggaggaggaggaggaatccgacgccactctggacgactctcagtcgtctcaaggc
gagccgaggaggtccggccgctgcagagtccgacctctgctgccaggagaggaccccgag
gaccgggaggagaaatacaagcctttgaagaggcggcgctctggagacggccccaaaagc
gatccagcgacgtcgagctcgccgcaaagcaggcgaagcacgaggagcgggcagaacccc
gagggggacggcggccggggcagactgagaaccaggtctcagacggacaagcgcgagtcg
ggccccaccggctcacagggaagatcctccaagagggtcaagctgtacagcgcttcacag
gacttccttggacctgatcccaaggacagccagtcgcagggaaggcaaaggccgcggagt
aaagcgacggaggagaccgcggcggaaggcggcgagatgaaggccgcgggttcgctcggc
gaggaacgggccgctcagactgccaagtgtacgccagaggacgggctagaagacgaatcc
caggagttggcggctggtcgacttactgaaaaagacggtgatgaacggaaatgttctcaa
acgaccacttgtctcgaaccgcaagacgttgagatggaggaaccgactgaggaaggaaag
caggccgatcctcacactgtcaccgcttcctccacacaggggggccaagagtctgagctt
ttagagaagaccagccggggtgagagggcttctcccgctgaccaagagcccgaaggaggc
gcaaacgtggccaaaaggttgaaaaaggagtccgaggtcaaaacgagtgacgacacggat
gacggcctgagccaagacggctctccggtgatcacgccctcctctgagggccgggctgtg
cgtcgctccagaagaagcaaggtctcctctgaggaaccagcagatggaggtgaaagcaag
gatttgtcgggaaggcctcgtcctcagccggaggccggcatcgcaggaaggacgaggagg
agcaaggtacaggaggagccctcaaggcccaggcgtagcgacagatacctgcgggggagg
tcctccccagcgtctcccgcaagcagtaaagagtcctcagagtcagagtcctccgaggtc
aaagaacatctcctcgagcccaaaaggaggggaaggacaccccgagcgtctcttccaagt
cctctcactactgactctaaggaggtcgcgaggaacaaagggacgctggaccaggagaat
gtccccgagttagaggagtcacaggcgacgcaagactggcaggagtctgggggtctgagt
caccacgaggaggagggcaacgaggagtcacgggcggagcaggagaagggcaacaacgag
gagtcacgggcggagcaggagaagggcaacaacgaggagtcacgggcggagcaggaggtt
aacgaggagtcacgggcgaaggaggagggcaacaacgaggagtcacgggcggagcaggag
gttaacgaggagtcacgggcgaaggaggagggcaacaacgaggagtcacgggcgggggag
gaggttaacgaggagtcacgggcgaaggaggagggcaacaacgaggagtcacgggcgaag
gaggagggcaacaacgaggagtcacgggcggagcaggagggcaacaacgaggagtcacgg
gcggagcaggagggcaacaacgaggagtcacgggcggagcagggggtcaacgaggagtca
cggccggagcgggaggttaacgaggagtcacgggcgaaggaggaggttaacgaggagtca
cgggcggaggaggaggttaacgaggagtcacgggcggaggaggaggttaacgaggagtca
cgggcggaggaggaggtggttaacgatgacacaaagcggagcgattggcccggggtgtcg
tctcccacggagcagaaggcgagcagctctccatctgctgcggtgctggaaccggtcggg
atctcttcggatccgacccgggactcctctgtgtcttctgttgaggaggcgcctcccaaa
gagacaatggaggcgctgcgggtgtctgggtcttcggaggagaaagacgaagaggtcaca
gggacgacgacgtctgagccagaggagacgctggttggtgaacgtcccccttttcctccc
acaggcccagacggccctggcgagcccgcccctggggggtggctggcgtcgacgatggag
gccctggccgtggcccccctggagctcggtcactgcgccccgcagctggagcagcaccac
ggccggttggcctgcgttgcggagacccgacccgacggttcagagtggaccccccgcgag
gcccccgtggtcccgctggaggacgcggccgaggaccgccgcgtcgagggtccgctgttc
tctgaggaggcggcggcggagtcggccccagatgacggaggtgacgcgaccctccaggag
agggagtcctgcggcgaggggacgagctcggcctccccggcgaagcagagggagctggag
gctctgatggcggcggatgtttccgggagcccgagcagcggcaggacccgagggacgtgg
tctccttcagcctccccgtccaccagcattctgaagaaggccccgaagagactgcaggag
gaggaggaagaggaggaggaggaggaggaggaggctgcctcccctctggtcaaatccaga
cgcgtgtcctttgcgaatccgatccaacatcaggaattggccgacgacatcgaccgccgc
agcccggccgtcaggaccagctccccccggacctccaggggcagcggcatccccaagtac
gtcaccacgcccaccaaaggcctcctcagcacgagtcccagcagagcgctgcacagcccg
gggtacaagagctccaagaagtgcctgatttccaaaatgagccaagagccgcggcccgtc
tccagagacagcgtctatccgtccctggtgggctgctctgcgcccgtggaggccgtgctg
cctcagatctcctccaacatgtggtctcggggtttcgggcagctcgttcgagcccgaaac
atcaaaacggtcggcgacctcagcgccctgacccccggcgagatcaagacgctgcccatc
cgctccccgaagatctccaacgtcaagaaggctctcagaagttatgagatgcagcgcaaa
ggacgagccggtgaggagttgaagagctttgaggagagggagacgacctctgagctggag
gagaccggcgctcctcaaaaccaagatgagacctcagagacgctggcagaggagctgctg
gaggaacggcttccttccgcgactccggcgcccgacgcggcgcccggggaacgcggccct
gcaggttggctggcgtcggcgatgggggccctcggggacgtcgggcccctggagctcgct
cactgctcccctcagcagctcgtggagctgcacggccggctgggaggcgccatggggcag
gtggtcgtggagctgcagaggcgcctcagccagaaggaggcgggaccccagagaggctcc
gcctctgaagcctcagacactctaatgctagaagactcgtag

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