Pungitius pungitius (ninespine stickleback): 119228746
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Entry
119228746 CDS
T07626
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119228746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119228746
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119228746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
119228746
NCBI-ProteinID:
XP_037344561
LinkDB
All DBs
Position
10:complement(10292888..10316727)
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AA seq
254 aa
AA seq
DB search
MSDKAQVNLTGVKQSKGVWLVKVPKYLSEQWDKAPEKGEVGKITIGKKLGKTEVSFSLDA
ELTARGGVGENDASTQVPREHPFTMHTAGGQTLAVFSQGDGDEIRLEGMVVHRAECRPVV
NDDYMRLKKLQLKESTKPQRLSQQLERAVTTIFKPRADHDFNLEHDKKKKTDGKMVRAER
QVVLDMLFSAFEKHQYYNIKDLVDITKQPVTYLKEIIREIGVYNSKGTHKSTWELKPEYR
HYRSAEEEEEMQTA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaagcgcaagtgaacctaactggggtcaaacagagtaaaggcgtgtggctg
gttaaggttcccaagtatttatccgagcaatgggacaaggcccctgaaaagggagaagtt
gggaagattaccatcggaaagaagctaggcaaaacagaggtatccttcagcctggacgcg
gagctgacggcccgcggcggtgtgggggagaacgatgcatccacgcaggtcccacgagag
catcccttcactatgcacacagcgggtggacagaccttggctgtcttcagccagggcgat
ggagatgaaatccgcctggaggggatggtggtgcacagagctgaatgcagaccggtcgtc
aacgacgactacatgaggctgaagaagctgcagctcaaagagtccacaaaacctcagcgt
ttgtcacagcagctggaaagagccgtcacgaccatcttcaagcccagggccgaccacgat
ttcaatctggagcacgacaagaagaagaagactgacgggaagatggtgcgagcggagcgg
caggtcgtgttggacatgctcttctctgcctttgagaagcaccagtattacaacattaag
gacttggtggacatcaccaaacaacctgttacctacctgaaagagatcataagggaaatc
ggcgtgtacaacagtaaggggactcacaagagcacctgggagctgaagccggagtaccgg
cactaccggtctgctgaggaagaggaggagatgcagacggcgtga
DBGET
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