Pungitius pungitius (ninespine stickleback): 119228887
Help
Entry
119228887 CDS
T07626
Symbol
si:dkey-230p4.1
Name
(RefSeq) trichohyalin
KO
K16464
centrosomal protein CEP250
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119228887 (si:dkey-230p4.1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119228887 (si:dkey-230p4.1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119228887 (si:dkey-230p4.1)
Cilium and associated proteins [BR:
ppug03037
]
Other cilia and associated proteins
Other cilium assembly proteins
119228887 (si:dkey-230p4.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
DUF1664
ERM_helical
Motif
Other DBs
NCBI-GeneID:
119228887
NCBI-ProteinID:
XP_037344770
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MQAELLIGWQREKAELQREVCRLQEELAESGAEKEELESRSRALEDRFIQSLSPSLALSL
RGESEQREWKRRVREGREREARQALLIHRLQNKVFEYRDRCQRSDLHLEDVSSHVLSAEQ
RIRDEHSDSLESALIRLEEEQQRSLGLVETNTILQEQLSQSEQANQALREERQKLTSDWT
RALEEAGQKENEWRRERECLTGHVGQHQARLLSLWTSVVALRRHCHTVKTAADRDLWQLR
AEFSRLSSSLLSSCDSVSSSLRLKAPLVKPFSSAPPAIVPLTPHSPPTLQDPSSPLPPLI
ASSNLGTFSLGEVQPQDEQQEEENEGLGGEKKRLEEEREGLDEEKKLLKEEREGLEEENK
RLEEKKEGLEGEKKRLKMLEEREGLEEEKKRLEEEREGLEEEKKQEVTKLQLLHETKVAE
WTERIEELYCSLQAEDHQKEEQRQGDAECCLESVKLGAELPLQQLGGEKTDVQLRLKQLE
DKHQLMIQRTQLELTHTLALLSRERGTSSSLRLRLEGMERETLRRVEAADVGKVQLTEVL
TLKGALERQQLDRQRAEEEAADIRDALQKSRDDVLRLSSSECVLRREVEDACDAVNKMAA
LNSCLALDKKELSQQLLKLECELQGARSEVTSLQREVDTINLDCSRLRAQREEEADVIRR
LRGAEERQLLLLMEERGSEGGQLEELSSQHASVCSELKEAQQQLRQSEEQVRRRERQQEE
QQRESRWLQEEQGHLQGQREQLEEEVQELRRLSLSLQEQLAQQQKELSQSEVERCQLVTH
VVTVQQVKEALRGEIECLRGELERTTAGREEQKRRGEEEKEALREETERLSREVEDLRRR
RREDEEELEVWQREREALNEALGTKDGEVEALRRRIEGLMEEEQDRQKEVERLREEVTKR
EVRIGHMMEMIQQEEARLEVEEKEKRTEVRLREEEVRREEEIEALCDRMERFEREKEMRE
EEIGRLRKEAEEAKRWRRRMEEEVNILRKKNSELEEEKREKEILQDKEEYDRRRREEEVD
QLRGEVIRAEGEVVRLMEKVAEVELLRVRLNVAKEECEEMKEEVERLERSLERQISAVRE
REEEVEELKEQMRLAKEQKEEGERECQEANFELKKRAGREEQLEALLKEARLLLQTERSE
GREKDVTLSSQARELQAAQAEKEGERRRAREREEDCDRLEEEVKEWREQAERRMREMTKL
NQILKKREEEAQYLKTMLEEKEEEDGRERDALRRIELDRRRRLDNTLMDMEEEQRTLKEK
VRGVEEEREKEMEALRRAREQRRTLDERLEDMEREVQEKRVHLSKTEKEKSKLEEELKEE
KEEKRKLAEANRRQHLLLEEGGRSRTRELEEEKARLSVELWQSRREVKVLREEVQKVQEE
KDYFQKTIMATEKDMNALREEVQKEHTEKEHAQETLFTKEKEVNALREEVQKVQEEKDQV
QKTLMATEKNMNALREEVQREHTEKEHVQETLMKKEKEVNALREDVQKEQKEKEHVQETL
MTKEKEVNALREEVQKELKEKEHFHETLMTKDKEVNALREEVQKELKEKDQVQKTLMATE
KDMNALREEVQKEHTEKEHAQETLFTKEREVNALREQVQKEKEDVRATLMTKEKEVNALR
EEVQKEHKEKEHFQETLKTKEKEVNALREDVQKEQKEEHFQKMLMTKEKEVNALREEVQK
VQEEKDQVQKTLMATEKDMNALREEVQKEHTEKEHAQETLFTKEREVNAHREQVQKEQKE
KEDVRATLMTKEKEVNALREEVQKEHTEKEHFQETLMTKEKQVNALREEVQKEQKEKEDV
QETLMTSEKEVNALREEVQKEKEHFQETLMTKEKEVNALREEVQKEKEDVQETLMTKEKE
VNALREKVQKEQKEKEHFQETLMTKEKEVNALREEVQKEQKEKEHFQETLMTKEKEVNAL
REEVQKEQKEKEHVQETLMTKEKEVNALREEESHTEEERLRRILKEEVERSREEAEKERG
EVEELRARANALERRRREMMDELEEAQQAKEKAEEHMRDAEERLRNRVEGVEDEEKEVKL
KALSREVQRLRKREQEIEKEWRSRVEEARKEGQESHFRVTMKEQNERRKRGRETNNKEKG
GGEGGGEEEDQQQDEEEEEEEQQIRKLLKQREAEVYALTQRTEELEKDRDRVRLALEQTQ
VAMIGYRERANLQEQTLGAGSSPDQAAGDRLVVLQHLVAQLELDQKRVHYKTCHLEHQRD
RLKRDRRALRDALRQVEAERSSFRQQLTDSTRSQESTDTTEEEHLRERVRELEEQVSRLR
LLLAADQQQRAEFIQQSSRNSQWLLSLRHNLRDSLDAVTRCPIPSVLVTETQRLDRSLRE
EELRLSLSQS
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagagctcctgattggatggcagcgagagaaggcggagcttcagagggaagtg
tgtcgtctgcaggaggagctggctgagagtggagcagagaaagaggagctggagtccagg
agcagagctctggaggacaggttcatccagtcattgtctccctcgctcgccctctctctg
cggggggagagtgagcagagggagtggaagagaagggtgagggaggggagagagagggag
gccagacaggctctgctcatccaccgcctgcagaacaaggtctttgagtacagagatcga
tgtcagcgatcagaccttcacctggaggatgtgagcagccatgtgctcagcgccgagcag
aggattagggatgaacacagtgactccctggagagcgccctcatccggctggaagaggaa
caacagaggtctctgggattggtggaaacaaacactatcctccaggagcaactcagccaa
tcagagcaggccaaccaggccctgagggaggaacgccagaagctgacgtctgattggacc
agagcgttagaggaggcggggcagaaagagaatgaatggcggagagagagagagtgtcta
acaggtcatgtgggtcagcaccaggctcggttactttcactttggacatccgtggtcgct
ctgaggagacactgtcacactgttaaaaccgccgccgacagggatctttggcagctcaga
gcggagttttctcgtctctcctcctctctcctgtccagctgtgactctgtctcctcttct
ctgaggctcaaagctcctctggtcaaacccttctcctctgcccccccagctatcgtcccc
cttactcctcactcaccccccactcttcaggacccctcatcacccctacctcctctcatc
gcctcctccaacctgggaaccttctccttaggagaagtgcagccccaagatgaacagcag
gaggaggagaatgagggactggggggagagaagaagaggttggaggaggagagggaggga
ctggatgaggagaagaagctgttgaaggaggagagggagggactggaggaggaaaataag
aggttggaggagaagaaggaaggactggagggagagaagaagagattgaagatgttggag
gagagggagggactggaggaggagaagaagaggttggaggaggagagggagggactggag
gaggagaagaagcaagaggtgaccaagttgcagctccttcatgagaccaaagttgcggag
tggacagaacgcattgaggagctgtattgctctctgcaggctgaggaccatcagaaggag
gagcagagacaaggagacgcagagtgttgtcttgaatcggtcaaactgggggcggagcta
cctctacagcagctcggaggggagaaaacagatgttcagctccgactgaaacagctggaa
gacaaacaccagttgatgatccaacgcacacagctggagctcacgcatactctggccctt
cttagcagggagcgtgggacgtcgtcctcgctgcgtctccggttggaggggatggagaga
gaaacactcagacgagtggaggctgccgacgtggggaaggtccagctgacggaggtcctc
accctgaagggggcgctggagaggcagcagctggaccgacagagagcagaagaagaagct
gccgacatcagagacgctttgcagaagtccagagacgatgtgttgaggctctcctcctct
gagtgtgtcttgaggagggaggtggaggatgcttgtgatgctgtgaacaagatggccgcc
ctgaactcctgtctggctctagacaagaaggagctgagccagcagctactgaagctggag
tgtgagctgcagggggcgaggtcagaggtcacctctctgcagagagaggtcgacaccatc
aacctggactgcagccgactcagggctcagagagaggaggaggctgacgtcattcgtcga
ctcagaggagcagaggagagacagttgctcctgctgatggaggaaagagggagtgaggga
ggtcagctggaagagctgtcctcccagcatgcctctgtgtgctcggagctaaaggaggcg
cagcagcagctgaggcagtcagaggagcaggtcagaaggagagagcggcagcaggaggag
caacagagggagagcaggtggctgcaggaggagcaggggcatctgcaggggcagagggag
cagctggaggaggaggtgcaggagctcaggaggctctcgctgtctctccaggagcagctg
gctcagcagcagaaggagctgtcacagtcggaggtggagcgctgtcagctggtcacacac
gtcgtcacggtgcagcaggtcaaagaggccttaagaggagaaattgagtgtctacgagga
gagctggaaagaaccacagccgggagagaagaacagaagaggaggggggaggaggagaag
gaggctctaagggaagagactgagaggctgtcgagggaggtggaagacttgaggaggaga
aggagggaagatgaagaggaactggaggtctggcagagagaaagggaggctctgaacgag
gcgcttgggacgaaggacggggaggtggaggcgctgaggaggcgcatagaggggctgatg
gaggaggagcaggacagacaaaaggaggtagagaggctgagggaggaggtgacaaagagg
gaggtgcgtataggccacatgatggagatgattcagcaggaggaggcaagattggaggtg
gaggagaaggagaagaggacagaggtccggctgagggaagaggaggtgagaagagaggag
gagattgaggcactgtgtgaccggatggagagattcgaacgagagaaggagatgagggag
gaggagattgggcgattgaggaaggaagcagaggaggcgaaaagatggaggaggagaatg
gaggaggaggttaacatactaagaaaaaaaaactctgagctagaggaggagaagagagag
aaggagatactgcaagacaaagaggagtatgatagaaggagaagggaagaggaggtagac
caactcagaggggaggtgattagagcagagggggaggtggtgaggctgatggagaaggtg
gcggaagtggagctactgagggtgaggctgaatgtggccaaggaggaatgtgaggagatg
aaagaggaggtagagcggttggagcgcagcctggagcgacagataagcgctgtgagggag
agggaggaggaggtggaggagctgaaggagcagatgaggttagcaaaagagcagaaggag
gagggagaaagagagtgtcaggaggcaaacttcgaactgaagaagagagcagggagggag
gagcagttggaggcgctgctgaaagaagcccggctcctcctacagacagagaggagtgag
ggacgagaaaaggatgtcacgctctcctctcaggccagagagctgcaggcagcacaggct
gaaaaggagggagagaggaggagagccagagaaagggaggaggactgcgataggctagag
gaggaggtgaaggagtggagggagcaggctgagcggaggatgagggagatgacaaagttg
aaccaaatcctgaagaagcgagaggaggaggcgcagtacctaaaaactatgctggaggag
aaggaggaagaggatgggagagaaagggatgcactgagaagaattgagctggacaggagg
agacgactggataatacgctgatggacatggaggaggagcagagaacacttaaagagaaa
gtgagaggggtggaggaggagcgggagaaagagatggaagcactgaggagagcaagggag
caaaggaggacgctggatgaaaggttagaggatatggagagggaggtgcaggagaaaaga
gtacatctgagtaagacggagaaggaaaagagtaagcttgaggaggagctgaaggaggaa
aaagaggagaaaaggaaactggcagaagctaatagaaggcagcaccttctgttagaggaa
ggtgggaggtccagaacgagagagttggaggaggagaaggcgagactatcagtggaactt
tggcagagtaggagggaggtgaaggttctcagggaggaggtgcagaaggtgcaggaggag
aaggattacttccaaaagacaataatggcaacagagaaggatatgaacgctctcagagag
gaggtgcaaaaggagcacacagaaaaggagcatgcccaagagacgttattcacaaaagag
aaggaggtgaatgctctcagagaggaggtgcagaaggtgcaggaggagaaggatcaagtc
caaaagacgttaatggcaacagagaagaatatgaatgctctcagagaggaggtgcaaagg
gagcacacagaaaaggagcatgtccaagagacgttaatgaaaaaagagaaggaggtgaat
gctctcagagaggatgtacagaaggagcagaaggaaaaggagcatgtccaagagacgtta
atgacaaaagagaaggaggtgaatgctctcagagaggaggtacaaaaggagctgaaggag
aaggagcatttccatgagacattaatgacaaaagataaggaggtgaatgctctcagagag
gaggtacaaaaggagcttaaggagaaggatcaagtccaaaaaacgttaatggcaacagag
aaggatatgaatgctctcagagaggaggtgcaaaaggagcacacagaaaaggagcatgcc
caagagacgttatttacaaaagagagggaggtgaatgctctcagagagcaggtacagaag
gagaaggaagatgtccgagctaccttaatgacaaaagagaaggaggtgaatgctctcaga
gaagaggtacaaaaggagcataaggagaaggagcatttccaagagacgttaaagacaaaa
gagaaggaggtgaatgctctcagagaagatgtacagaaggagcagaaggaggagcatttc
caaaagatgttaatgacaaaagagaaggaggtgaatgctctcagagaggaggtgcagaag
gtgcaggaggagaaggatcaagtccaaaagacgttaatggcaacagagaaggatatgaat
gctctcagagaggaggtgcaaaaggagcacacagaaaaggagcatgcccaagagacgtta
tttacaaaagagagggaggtgaatgctcacagagagcaggtacagaaggagcagaaggag
aaggaagatgtccgagctaccttaatgacaaaagagaaggaggtgaatgctctcagagag
gaggtacaaaaggagcatacggagaaggagcatttccaagagacgttaatgacaaaagag
aagcaggtgaatgctctcagagaggaggtacagaaggagcagaaggagaaggaggatgtc
caagagacgttgatgacaagcgagaaggaggtgaatgctctcagagaggaggtacagaag
gagaaggagcattttcaagagacgttaatgacaaaagagaaggaggtgaatgctctcaga
gaggaggtacagaaggagaaggaggatgtccaagagacgttgatgacaaaagagaaggag
gtgaatgctctcagagagaaggtacagaaggagcagaaggagaaggagcattttcaagag
acgttaatgacaaaagagaaggaggtgaatgctctcagagaggaggtacagaaggagcag
aaggagaaggagcattttcaagagacgttaatgacaaaagagaaggaggtgaatgctctc
agagaggaggtacagaaggagcagaaggagaaggagcatgtccaagagacgttaatgaca
aaagagaaggaggtgaatgctctcagagaggaggagagccacacagaggaggagcgtctg
aggagaatcctgaaggaggaggtagagaggtccagagaggaggcggagaaggagagagga
gaggtggaggagctgagagccagagccaatgccctggagaggaggagaagggagatgatg
gacgagctggaggaggcccaacaggcaaaggagaaggcagaggagcacatgcgagatgcc
gaggagaggttgaggaacagagtggaaggggtggaggatgaggagaaggaggtgaagctg
aaagctctgtcaagagaagtccagaggctgaggaagagagagcaggagattgagaaggag
tggcggtcaagggtggaggaggcaaggaaggaagggcaggagagccatttcagagtcacg
atgaaggagcagaatgaacggaggaagagaggccgagagacaaacaacaaggagaaagga
ggtggagaaggaggaggagaagaggaggaccagcagcaggatgaggaggaggaggaggag
gagcagcagattaggaagctgctgaaacaaagagaagctgaggtgtacgctctgactcag
aggacagaggagctggagaaagacagagatcgtgtccgattggctctggagcaaacacag
gtggctatgattggctacagggagagagccaacctacaggagcagaccctgggggcgggg
tctagcccagatcaggcggccggagatagactggtggtgctgcaacatctggtggctcaa
ctggagctcgatcagaaacgggtccactacaagacctgtcaccttgaacatcagagagac
cggttgaagagagacagacgggcactcagggacgcgctgagacaggtggaggcggagcgt
tcaagcttcagacagcagctaactgacagcaccagatctcaggagtctacagacaccaca
gaagaagaacacctgagggaaagagtcagggagctggaggagcaggtcagccggctacgt
ctcttattggctgccgaccagcagcagagggcagagttcatccagcagtcctccaggaac
agccaatggctgctctctctgagacacaacctcagggattcactggacgccgtcacgcgt
tgtccaatcccatccgtcctggtgactgagacgcagcgattggaccgcagcctcagagag
gaggagcttaggttgtcccttagccaatcgtaa
DBGET
integrated database retrieval system
